RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CEP162Q5TB80 1403 aa-0.79□□□□□ -2.54
RNU6-40P-201ENST00000384254 CCNB3Q8WWL7 1395 aa-0.79□□□□□ -2.54
RNU6-40P-201ENST00000384254 RGPD8O14715 1765 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-40P-201ENST00000384254 RGPD5Q99666 1765 aa-0.79□□□□□ -2.54
RNU6-40P-201ENST00000384254 MT1EP04732 61 aa-0.8□□□□□ -2.54
RNU6-40P-201ENST00000384254 TJP1Q07157 1748 aa-0.81□□□□□ -2.54
RNU6-40P-201ENST00000384254 V9GYS6 101 aa-0.81□□□□□ -2.54
RNU6-40P-201ENST00000384254 NEXMIFQ5QGS0 1516 aa-0.81□□□□□ -2.54
RNU6-40P-201ENST00000384254 UBR1Q8IWV7 1749 aa-0.81□□□□□ -2.54
RNU6-40P-201ENST00000384254 RPS29P62273 56 aaKnown RBP-0.82□□□□□ -2.54
RNU6-40P-201ENST00000384254 MYMXA0A1B0GTQ4 84 aa-0.84□□□□□ -2.54
RNU6-40P-201ENST00000384254 RGPD1P0DJD0 1748 aa-0.84□□□□□ -2.54
RNU6-40P-201ENST00000384254 SNRPFP62306 86 aaKnown RBP-0.85□□□□□ -2.55
RNU6-40P-201ENST00000384254 WFDC9Q8NEX5 89 aa-0.85□□□□□ -2.55
RNU6-40P-201ENST00000384254 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.85□□□□□ -2.55
RNU6-40P-201ENST00000384254 PLIN4Q96Q06 1357 aa-0.85□□□□□ -2.55
RNU6-40P-201ENST00000384254 PTPN23Q9H3S7 1636 aa-0.86□□□□□ -2.55
RNU6-40P-201ENST00000384254 SUPT6HQ7KZ85 1726 aaKnown RBP-0.86□□□□□ -2.55
RNU6-40P-201ENST00000384254 KRTAP19-2Q3LHN2 52 aa-0.86□□□□□ -2.55
RNU6-40P-201ENST00000384254 MT1LQ93083 61 aa-0.86□□□□□ -2.55
RNU6-40P-201ENST00000384254 S100A16Q96FQ6 103 aaKnown RBP-0.86□□□□□ -2.55
RNU6-40P-201ENST00000384254 CICQ96RK0 1608 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-40P-201ENST00000384254 TRAV21A0A0B4J279 112 aa-0.87□□□□□ -2.55
RNU6-40P-201ENST00000384254 NDUFA3O95167 84 aa-0.87□□□□□ -2.55
RNU6-40P-201ENST00000384254 ADAMTS12P58397 1594 aa-0.87□□□□□ -2.55
RNU6-40P-201ENST00000384254 KIAA0586Q9BVV6 1533 aa-0.88□□□□□ -2.55
RNU6-40P-201ENST00000384254 PVALEFA0A1B0GWK0 134 aa-0.88□□□□□ -2.55
RNU6-40P-201ENST00000384254 K7EP34 96 aa-0.88□□□□□ -2.55
RNU6-40P-201ENST00000384254 DEFB1P60022 68 aa-0.89□□□□□ -2.55
RNU6-40P-201ENST00000384254 CDC42BPGQ6DT37 1551 aa-0.9□□□□□ -2.55
RNU6-40P-201ENST00000384254 NDUFB1O75438 58 aa-0.9□□□□□ -2.55
RNU6-40P-201ENST00000384254 LINC00643Q86TS7 51 aa-0.9□□□□□ -2.55
RNU6-40P-201ENST00000384254 CEBPZOSA8MTT3 80 aa-0.91□□□□□ -2.56
RNU6-40P-201ENST00000384254 ABCC3O15438 1527 aa-0.91□□□□□ -2.56
RNU6-40P-201ENST00000384254 LTN1O94822 1766 aa-0.91□□□□□ -2.56
RNU6-40P-201ENST00000384254 RABAC1Q9UI14 185 aa-0.92□□□□□ -2.56
RNU6-40P-201ENST00000384254 TTC37Q6PGP7 1564 aa-0.92□□□□□ -2.56
RNU6-40P-201ENST00000384254 C4AP0C0L4 1744 aa-0.92□□□□□ -2.56
RNU6-40P-201ENST00000384254 C4BP0C0L5 1744 aa-0.92□□□□□ -2.56
RNU6-40P-201ENST00000384254 ZNF831Q5JPB2 1677 aa-0.93□□□□□ -2.56
RNU6-40P-201ENST00000384254 ACYP1P07311 99 aa-0.93□□□□□ -2.56
RNU6-40P-201ENST00000384254 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-40P-201ENST00000384254 DEFB4AO15263 64 aa-0.94□□□□□ -2.56
RNU6-40P-201ENST00000384254 POLR1AO95602 1720 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-40P-201ENST00000384254 KRTAP19-5Q3LI72 72 aa-0.95□□□□□ -2.56
RNU6-40P-201ENST00000384254 DEFB121Q5J5C9 76 aa-0.97□□□□□ -2.56
RNU6-40P-201ENST00000384254 ARHGAP35Q9NRY4 1499 aa-0.98□□□□□ -2.57
RNU6-40P-201ENST00000384254 C3orf79P0CE67 100 aa-0.98□□□□□ -2.57
RNU6-40P-201ENST00000384254 TTTY10Q9BZA0 68 aa-0.98□□□□□ -2.57
RNU6-40P-201ENST00000384254 PRO3102Q9H379 93 aa-0.99□□□□□ -2.57
RNU6-40P-201ENST00000384254 PPLO60437 1756 aa-1□□□□□ -2.57
RNU6-40P-201ENST00000384254 TMEM131LA2VDJ0 1609 aa-1□□□□□ -2.57
RNU6-40P-201ENST00000384254 KANTRA0A1W2PQU2 76 aa-1.01□□□□□ -2.57
RNU6-40P-201ENST00000384254 KIF14Q15058 1648 aa-1.01□□□□□ -2.57
RNU6-40P-201ENST00000384254 URB2Q14146 1524 aaKnown RBP-1.02□□□□□ -2.57
RNU6-40P-201ENST00000384254 NWD1Q149M9 1564 aa-1.02□□□□□ -2.57
RNU6-40P-201ENST00000384254 USP32Q8NFA0 1604 aa-1.02□□□□□ -2.57
RNU6-40P-201ENST00000384254 MAP3K4Q9Y6R4 1608 aa-1.02□□□□□ -2.57
RNU6-40P-201ENST00000384254 CDC42BPAQ5VT25 1732 aa-1.04□□□□□ -2.58
RNU6-40P-201ENST00000384254 NESP48681 1621 aa-1.04□□□□□ -2.58
RNU6-40P-201ENST00000384254 PREX2Q70Z35 1606 aa-1.04□□□□□ -2.58
RNU6-40P-201ENST00000384254 MAST1Q9Y2H9 1570 aa-1.04□□□□□ -2.58
RNU6-40P-201ENST00000384254 DOT1LQ8TEK3 1739 aa-1.05□□□□□ -2.58
RNU6-40P-201ENST00000384254 IFI27P40305 119 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-40P-201ENST00000384254 LINC00158P58513 81 aa-1.05□□□□□ -2.58
RNU6-40P-201ENST00000384254 NCOA2Q15596 1464 aa-1.05□□□□□ -2.58
RNU6-40P-201ENST00000384254 ZC3H13Q5T200 1668 aaKnown RBP-1.06□□□□□ -2.58
RNU6-40P-201ENST00000384254 PLXNC1O60486 1568 aa-1.06□□□□□ -2.58
RNU6-40P-201ENST00000384254 RNF17Q9BXT8 1623 aaKnown RBP-1.07□□□□□ -2.58
RNU6-40P-201ENST00000384254 ERVK-7P63135 1459 aa-1.07□□□□□ -2.58
RNU6-40P-201ENST00000384254 UACAQ9BZF9 1416 aa-1.07□□□□□ -2.58
RNU6-40P-201ENST00000384254 UMAD1C9J7I0 102 aa-1.08□□□□□ -2.58
RNU6-40P-201ENST00000384254 S4R3F8 94 aa-1.08□□□□□ -2.58
RNU6-40P-201ENST00000384254 PLCH1Q4KWH8 1693 aa-1.08□□□□□ -2.58
RNU6-40P-201ENST00000384254 H3BNG1 76 aa-1.09□□□□□ -2.58
RNU6-40P-201ENST00000384254 PARP4Q9UKK3 1724 aaKnown RBP-1.1□□□□□ -2.59
RNU6-40P-201ENST00000384254 LY75O60449 1722 aa-1.11□□□□□ -2.59
RNU6-40P-201ENST00000384254 ITSN1Q15811 1721 aa-1.11□□□□□ -2.59
RNU6-40P-201ENST00000384254 NFAT5O94916 1531 aa-1.11□□□□□ -2.59
RNU6-40P-201ENST00000384254 NRAPQ86VF7 1730 aa-1.12□□□□□ -2.59
RNU6-40P-201ENST00000384254 DEFB136Q30KP8 78 aa-1.12□□□□□ -2.59
RNU6-40P-201ENST00000384254 CLASP1Q7Z460 1538 aa-1.12□□□□□ -2.59
RNU6-40P-201ENST00000384254 ARFGEF2Q9Y6D5 1785 aa-1.13□□□□□ -2.59
RNU6-40P-201ENST00000384254 MAGI3Q5TCQ9 1506 aa-1.13□□□□□ -2.59
RNU6-40P-201ENST00000384254 CROCC2H7BZ55 1655 aa-1.13□□□□□ -2.59
RNU6-40P-201ENST00000384254 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.14□□□□□ -2.59
RNU6-40P-201ENST00000384254 TDRG1Q3Y452 100 aa-1.14□□□□□ -2.59
RNU6-40P-201ENST00000384254 CLPSL2Q6UWE3 100 aa-1.14□□□□□ -2.59
RNU6-40P-201ENST00000384254 PIK3C2BO00750 1634 aa-1.15□□□□□ -2.59
RNU6-40P-201ENST00000384254 C9orf92A6NGG3 77 aa-1.15□□□□□ -2.59
RNU6-40P-201ENST00000384254 GNG2P59768 71 aa-1.15□□□□□ -2.59
RNU6-40P-201ENST00000384254 WIZO95785 1651 aa-1.16□□□□□ -2.59
RNU6-40P-201ENST00000384254 ATP5EP2Q5VTU8 51 aa-1.16□□□□□ -2.6
RNU6-40P-201ENST00000384254 TOGARAM1Q9Y4F4 1720 aa-1.16□□□□□ -2.6
RNU6-40P-201ENST00000384254 ANKRD50Q9ULJ7 1429 aa-1.16□□□□□ -2.6
RNU6-40P-201ENST00000384254 SCN11AQ9UI33 1791 aa-1.16□□□□□ -2.6
RNU6-40P-201ENST00000384254 CCDC88BA6NC98 1476 aa-1.17□□□□□ -2.6
RNU6-40P-201ENST00000384254 DEFB110Q30KQ9 67 aa-1.17□□□□□ -2.6
RNU6-40P-201ENST00000384254 TIAM1Q13009 1591 aa-1.17□□□□□ -2.6
RNU6-40P-201ENST00000384254 MADDQ8WXG6 1647 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms