RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 ZANQ9Y493 2812 aa8.72□□□□□ -1.01
SNPH-202ENST00000381873 NIPBLQ6KC79 2804 aaeCLIP8.71□□□□□ -1.01
SNPH-202ENST00000381873 DMDP11532 3685 aa8.7□□□□□ -1.02
SNPH-202ENST00000381873 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
SNPH-202ENST00000381873 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
SNPH-202ENST00000381873 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
SNPH-202ENST00000381873 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
SNPH-202ENST00000381873 M0QZ58 72 aa8.65□□□□□ -1.02
SNPH-202ENST00000381873 MUC3AQ02505 3323 aa8.65□□□□□ -1.03
SNPH-202ENST00000381873 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
SNPH-202ENST00000381873 CELSR2Q9HCU4 2923 aa8.6□□□□□ -1.03
SNPH-202ENST00000381873 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
SNPH-202ENST00000381873 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
SNPH-202ENST00000381873 DCHS2Q6V1P9 2916 aa8.56□□□□□ -1.04
SNPH-202ENST00000381873 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
SNPH-202ENST00000381873 NOTCH2NLQ7Z3S9 236 aa8.55□□□□□ -1.04
SNPH-202ENST00000381873 TENM3Q9P273 2699 aa8.55□□□□□ -1.04
SNPH-202ENST00000381873 CRYBG3Q68DQ2 2970 aa8.55□□□□□ -1.04
SNPH-202ENST00000381873 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
SNPH-202ENST00000381873 ZFHX4Q86UP3 3567 aa8.53□□□□□ -1.04
SNPH-202ENST00000381873 LAMA5O15230 3695 aa8.53□□□□□ -1.04
SNPH-202ENST00000381873 RELNP78509 3460 aa8.53□□□□□ -1.04
SNPH-202ENST00000381873 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.04
SNPH-202ENST00000381873 ROMO1P60602 79 aa8.52□□□□□ -1.05
SNPH-202ENST00000381873 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
SNPH-202ENST00000381873 MXRA5Q9NR99 2828 aa8.5□□□□□ -1.05
SNPH-202ENST00000381873 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
SNPH-202ENST00000381873 ASPMQ8IZT6 3477 aa8.49□□□□□ -1.05
SNPH-202ENST00000381873 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.06
SNPH-202ENST00000381873 NF1P21359 2839 aa8.46□□□□□ -1.06
SNPH-202ENST00000381873 FBN2P35556 2912 aa8.45□□□□□ -1.06
SNPH-202ENST00000381873 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
SNPH-202ENST00000381873 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
SNPH-202ENST00000381873 DCHS1Q96JQ0 3298 aa8.4□□□□□ -1.06
SNPH-202ENST00000381873 SMG1Q96Q15 3661 aaKnown RBP8.4□□□□□ -1.07
SNPH-202ENST00000381873 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
SNPH-202ENST00000381873 H3BS24 57 aa8.33□□□□□ -1.08
SNPH-202ENST00000381873 A8MUU9 505 aa8.32□□□□□ -1.08
SNPH-202ENST00000381873 TENM1Q9UKZ4 2725 aa8.31□□□□□ -1.08
SNPH-202ENST00000381873 C20orf166-AS1Q96NR2 134 aa8.28□□□□□ -1.08
SNPH-202ENST00000381873 CSMD1Q96PZ7 3565 aa8.24□□□□□ -1.09
SNPH-202ENST00000381873 BSNQ9UPA5 3926 aa8.23□□□□□ -1.09
SNPH-202ENST00000381873 A6NN06 94 aa8.22□□□□□ -1.09
SNPH-202ENST00000381873 A8MU10 97 aa8.21□□□□□ -1.09
SNPH-202ENST00000381873 PDZD2O15018 2839 aa8.2□□□□□ -1.1
SNPH-202ENST00000381873 TENM2Q9NT68 2774 aa8.18□□□□□ -1.1
SNPH-202ENST00000381873 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
SNPH-202ENST00000381873 SPENQ96T58 3664 aaKnown RBP8.11□□□□□ -1.11
SNPH-202ENST00000381873 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
SNPH-202ENST00000381873 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
SNPH-202ENST00000381873 SVEP1Q4LDE5 3571 aa8.06□□□□□ -1.12
SNPH-202ENST00000381873 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
SNPH-202ENST00000381873 OTOGQ6ZRI0 2925 aa8.05□□□□□ -1.12
SNPH-202ENST00000381873 TNP1P09430 55 aa8.03□□□□□ -1.12
SNPH-202ENST00000381873 XP32Q5T750 250 aa7.99□□□□□ -1.13
SNPH-202ENST00000381873 VWFP04275 2813 aa7.95□□□□□ -1.14
SNPH-202ENST00000381873 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
SNPH-202ENST00000381873 NBPF19A0A087WUL8 3843 aa7.91□□□□□ -1.14
SNPH-202ENST00000381873 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
SNPH-202ENST00000381873 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
SNPH-202ENST00000381873 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
SNPH-202ENST00000381873 KRTAP10-8P60410 259 aa7.84□□□□□ -1.15
SNPH-202ENST00000381873 ZFHX3Q15911 3703 aa7.83□□□□□ -1.16
SNPH-202ENST00000381873 TGP01266 2768 aa7.82□□□□□ -1.16
SNPH-202ENST00000381873 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
SNPH-202ENST00000381873 CSMD2Q7Z408 3487 aa7.8□□□□□ -1.16
SNPH-202ENST00000381873 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
SNPH-202ENST00000381873 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
SNPH-202ENST00000381873 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
SNPH-202ENST00000381873 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
SNPH-202ENST00000381873 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
SNPH-202ENST00000381873 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
SNPH-202ENST00000381873 H0YAA0 97 aa7.64□□□□□ -1.19
SNPH-202ENST00000381873 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
SNPH-202ENST00000381873 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
SNPH-202ENST00000381873 P0C880 135 aa7.59□□□□□ -1.19
SNPH-202ENST00000381873 CUBNO60494 3623 aa7.58□□□□□ -1.2
SNPH-202ENST00000381873 TRRAPQ9Y4A5 3859 aa7.57□□□□□ -1.2
SNPH-202ENST00000381873 AKAP9Q99996 3911 aa7.47□□□□□ -1.21
SNPH-202ENST00000381873 ZNF469Q96JG9 3925 aaPredicted RBP7.46□□□□□ -1.21
SNPH-202ENST00000381873 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
SNPH-202ENST00000381873 HUWE1Q7Z6Z7 4374 aaKnown RBP7.32□□□□□ -1.24
SNPH-202ENST00000381873 COL7A1Q02388 2944 aa7.28□□□□□ -1.24
SNPH-202ENST00000381873 MEGF8Q7Z7M0 2845 aa7.23□□□□□ -1.25
SNPH-202ENST00000381873 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
SNPH-202ENST00000381873 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.27
SNPH-202ENST00000381873 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
SNPH-202ENST00000381873 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
SNPH-202ENST00000381873 MT1HL1P0DM35 61 aa7.11□□□□□ -1.27
SNPH-202ENST00000381873 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
SNPH-202ENST00000381873 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
SNPH-202ENST00000381873 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
SNPH-202ENST00000381873 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
SNPH-202ENST00000381873 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
SNPH-202ENST00000381873 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
SNPH-202ENST00000381873 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
SNPH-202ENST00000381873 DNHD1Q96M86 4753 aa6.88□□□□□ -1.31
SNPH-202ENST00000381873 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
SNPH-202ENST00000381873 VPS13DQ5THJ4 4388 aa6.86□□□□□ -1.31
SNPH-202ENST00000381873 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms