RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 A8MWP4 228 aa8.37□□□□□ -1.07
PDGFB-202ENST00000381551 DSCR10P59022 87 aa8.37□□□□□ -1.07
PDGFB-202ENST00000381551 LINC00313P59037 77 aa8.37□□□□□ -1.07
PDGFB-202ENST00000381551 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
PDGFB-202ENST00000381551 NDUFB1O75438 58 aa8.36□□□□□ -1.07
PDGFB-202ENST00000381551 UBL5Q9BZL1 73 aa8.35□□□□□ -1.07
PDGFB-202ENST00000381551 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
PDGFB-202ENST00000381551 BPY2O14599 106 aa8.34□□□□□ -1.07
PDGFB-202ENST00000381551 ACYP1P07311 99 aa8.33□□□□□ -1.08
PDGFB-202ENST00000381551 SEC61BP60468 96 aaKnown RBP8.33□□□□□ -1.08
PDGFB-202ENST00000381551 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
PDGFB-202ENST00000381551 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
PDGFB-202ENST00000381551 RPL37P61927 97 aaKnown RBP8.32□□□□□ -1.08
PDGFB-202ENST00000381551 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
PDGFB-202ENST00000381551 MUC2Q02817 5179 aa8.31□□□□□ -1.08
PDGFB-202ENST00000381551 FAM240AA0A1B0GVK7 77 aa8.31□□□□□ -1.08
PDGFB-202ENST00000381551 Q75L30 129 aa8.3□□□□□ -1.08
PDGFB-202ENST00000381551 C20orf166-AS1Q96NR2 134 aa8.29□□□□□ -1.08
PDGFB-202ENST00000381551 A8MUU9 505 aa8.28□□□□□ -1.08
PDGFB-202ENST00000381551 K7EQZ3 153 aa8.27□□□□□ -1.09
PDGFB-202ENST00000381551 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
PDGFB-202ENST00000381551 PCOTHQ58A44 107 aa8.26□□□□□ -1.09
PDGFB-202ENST00000381551 KRTAP9-2Q9BYQ4 174 aa8.25□□□□□ -1.09
PDGFB-202ENST00000381551 Q8N9L7 120 aa8.24□□□□□ -1.09
PDGFB-202ENST00000381551 CXCL6P80162 114 aa8.23□□□□□ -1.09
PDGFB-202ENST00000381551 MMP24-AS1A0A0U1RRL7 71 aa8.22□□□□□ -1.09
PDGFB-202ENST00000381551 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
PDGFB-202ENST00000381551 J3QR89 54 aa8.21□□□□□ -1.1
PDGFB-202ENST00000381551 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
PDGFB-202ENST00000381551 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
PDGFB-202ENST00000381551 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
PDGFB-202ENST00000381551 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
PDGFB-202ENST00000381551 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
PDGFB-202ENST00000381551 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
PDGFB-202ENST00000381551 MRPL34Q9BQ48 92 aaKnown RBP8.16□□□□□ -1.1
PDGFB-202ENST00000381551 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
PDGFB-202ENST00000381551 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
PDGFB-202ENST00000381551 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
PDGFB-202ENST00000381551 WFDC13Q8IUB5 93 aa8.13□□□□□ -1.11
PDGFB-202ENST00000381551 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
PDGFB-202ENST00000381551 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
PDGFB-202ENST00000381551 K7ERU9 68 aa8.08□□□□□ -1.12
PDGFB-202ENST00000381551 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
PDGFB-202ENST00000381551 NDUFS5O43920 106 aa8.06□□□□□ -1.12
PDGFB-202ENST00000381551 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
PDGFB-202ENST00000381551 Q5W150 140 aa7.99□□□□□ -1.13
PDGFB-202ENST00000381551 A0A087WVE0 104 aa7.98□□□□□ -1.13
PDGFB-202ENST00000381551 SPINK7P58062 85 aa7.96□□□□□ -1.14
PDGFB-202ENST00000381551 KRTAP19-2Q3LHN2 52 aa7.96□□□□□ -1.14
PDGFB-202ENST00000381551 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
PDGFB-202ENST00000381551 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
PDGFB-202ENST00000381551 MT-ATP8P03928 68 aa7.91□□□□□ -1.14
PDGFB-202ENST00000381551 HRES1P13985 223 aa7.9□□□□□ -1.14
PDGFB-202ENST00000381551 IMUPQ9GZP8 106 aa7.9□□□□□ -1.14
PDGFB-202ENST00000381551 MPLKIPQ8TAP9 179 aa7.87□□□□□ -1.15
PDGFB-202ENST00000381551 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.15
PDGFB-202ENST00000381551 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
PDGFB-202ENST00000381551 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
PDGFB-202ENST00000381551 UQCRQO14949 82 aa7.83□□□□□ -1.16
PDGFB-202ENST00000381551 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
PDGFB-202ENST00000381551 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
PDGFB-202ENST00000381551 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
PDGFB-202ENST00000381551 RBM12B-AS1Q9P1G2 102 aa7.81□□□□□ -1.16
PDGFB-202ENST00000381551 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
PDGFB-202ENST00000381551 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
PDGFB-202ENST00000381551 SCGB1A1P11684 91 aa7.78□□□□□ -1.16
PDGFB-202ENST00000381551 MT1HP80294 61 aa7.77□□□□□ -1.17
PDGFB-202ENST00000381551 FAM236DA0A1B0GTK5 79 aa7.75□□□□□ -1.17
PDGFB-202ENST00000381551 FAM236CP0DP71 79 aa7.75□□□□□ -1.17
PDGFB-202ENST00000381551 H0Y9P7 68 aa7.74□□□□□ -1.17
PDGFB-202ENST00000381551 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
PDGFB-202ENST00000381551 ATOX1O00244 68 aa7.73□□□□□ -1.17
PDGFB-202ENST00000381551 FAM236AA0A1B0GUQ0 79 aa7.72□□□□□ -1.17
PDGFB-202ENST00000381551 FAM236BA0A1B0GV22 79 aa7.72□□□□□ -1.17
PDGFB-202ENST00000381551 LOC101927531A0A1B0GV80 90 aa7.72□□□□□ -1.17
PDGFB-202ENST00000381551 C5orf47Q569G3 176 aa7.71□□□□□ -1.18
PDGFB-202ENST00000381551 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
PDGFB-202ENST00000381551 C4orf26Q17RF5 130 aa7.69□□□□□ -1.18
PDGFB-202ENST00000381551 MP68P56378 58 aa7.68□□□□□ -1.18
PDGFB-202ENST00000381551 C1orf64Q8NEQ6 169 aa7.68□□□□□ -1.18
PDGFB-202ENST00000381551 LINC00208Q96KT6 92 aa7.67□□□□□ -1.18
PDGFB-202ENST00000381551 SMIM20Q8N5G0 67 aa7.66□□□□□ -1.18
PDGFB-202ENST00000381551 TRAV7A0A075B6U4 112 aa7.64□□□□□ -1.19
PDGFB-202ENST00000381551 M0R2T5 61 aa7.64□□□□□ -1.19
PDGFB-202ENST00000381551 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
PDGFB-202ENST00000381551 H3BPC8 53 aa7.62□□□□□ -1.19
PDGFB-202ENST00000381551 H1FX-AS1Q4G0G2 97 aa7.62□□□□□ -1.19
PDGFB-202ENST00000381551 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
PDGFB-202ENST00000381551 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
PDGFB-202ENST00000381551 KLKP1Q107X0 134 aa7.58□□□□□ -1.2
PDGFB-202ENST00000381551 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
PDGFB-202ENST00000381551 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
PDGFB-202ENST00000381551 SERP2Q8N6R1 65 aa7.53□□□□□ -1.2
PDGFB-202ENST00000381551 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
PDGFB-202ENST00000381551 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
PDGFB-202ENST00000381551 A8MUN3 132 aa7.43□□□□□ -1.22
PDGFB-202ENST00000381551 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
PDGFB-202ENST00000381551 S4R3F8 94 aa7.43□□□□□ -1.22
PDGFB-202ENST00000381551 COX7CP15954 63 aa7.41□□□□□ -1.22
PDGFB-202ENST00000381551 LCA10Q71F78 164 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms