RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 H7BZZ5 65 aa9.99□□□□□ -0.81
RPAIN-203ENST00000381209 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
RPAIN-203ENST00000381209 APOBP04114 4563 aaKnown RBP9.96□□□□□ -0.82
RPAIN-203ENST00000381209 SPINK1P00995 79 aa9.94□□□□□ -0.82
RPAIN-203ENST00000381209 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
RPAIN-203ENST00000381209 C8orf87E5RJ46 101 aa9.92□□□□□ -0.82
RPAIN-203ENST00000381209 PRR26Q8N8Z3 221 aa9.92□□□□□ -0.82
RPAIN-203ENST00000381209 MP68P56378 58 aa9.92□□□□□ -0.82
RPAIN-203ENST00000381209 ZCCHC13Q8WW36 166 aaKnown RBP9.92□□□□□ -0.82
RPAIN-203ENST00000381209 TP53AIP1Q9HCN2 124 aa9.92□□□□□ -0.82
RPAIN-203ENST00000381209 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
RPAIN-203ENST00000381209 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
RPAIN-203ENST00000381209 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
RPAIN-203ENST00000381209 RYR3Q15413 4870 aa9.89□□□□□ -0.83
RPAIN-203ENST00000381209 H3BPC8 53 aa9.89□□□□□ -0.83
RPAIN-203ENST00000381209 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
RPAIN-203ENST00000381209 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
RPAIN-203ENST00000381209 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
RPAIN-203ENST00000381209 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
RPAIN-203ENST00000381209 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
RPAIN-203ENST00000381209 H0Y9P7 68 aa9.86□□□□□ -0.83
RPAIN-203ENST00000381209 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
RPAIN-203ENST00000381209 RPS28P62857 69 aaKnown RBP9.84□□□□□ -0.83
RPAIN-203ENST00000381209 TRAV22A0A0B4J277 110 aa9.83□□□□□ -0.84
RPAIN-203ENST00000381209 FAT1Q14517 4588 aa9.82□□□□□ -0.84
RPAIN-203ENST00000381209 NDUFS5O43920 106 aa9.82□□□□□ -0.84
RPAIN-203ENST00000381209 LINC00313P59037 77 aa9.82□□□□□ -0.84
RPAIN-203ENST00000381209 LINC00208Q96KT6 92 aa9.82□□□□□ -0.84
RPAIN-203ENST00000381209 C1orf64Q8NEQ6 169 aa9.77□□□□□ -0.84
RPAIN-203ENST00000381209 Q5VSD8 79 aa9.75□□□□□ -0.85
RPAIN-203ENST00000381209 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
RPAIN-203ENST00000381209 SERP1Q9Y6X1 66 aa9.73□□□□□ -0.85
RPAIN-203ENST00000381209 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
RPAIN-203ENST00000381209 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
RPAIN-203ENST00000381209 SPANXA2-OT1Q8N9U9 137 aa9.67□□□□□ -0.86
RPAIN-203ENST00000381209 PKHD1L1Q86WI1 4243 aa9.67□□□□□ -0.86
RPAIN-203ENST00000381209 Q5W150 140 aa9.66□□□□□ -0.86
RPAIN-203ENST00000381209 OXTP01178 125 aa9.65□□□□□ -0.86
RPAIN-203ENST00000381209 CYP4F30PQ9H0H9 118 aa9.65□□□□□ -0.86
RPAIN-203ENST00000381209 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
RPAIN-203ENST00000381209 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
RPAIN-203ENST00000381209 HSPG2P98160 4391 aa9.64□□□□□ -0.87
RPAIN-203ENST00000381209 RYR1P21817 5038 aa9.62□□□□□ -0.87
RPAIN-203ENST00000381209 Q8N1X5 172 aa9.59□□□□□ -0.87
RPAIN-203ENST00000381209 IGLV7-46A0A075B6I9 117 aa9.57□□□□□ -0.88
RPAIN-203ENST00000381209 KRTAP17-1Q9BYP8 105 aa9.57□□□□□ -0.88
RPAIN-203ENST00000381209 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
RPAIN-203ENST00000381209 PRR4Q16378 134 aa9.54□□□□□ -0.88
RPAIN-203ENST00000381209 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
RPAIN-203ENST00000381209 SMIM26A0A096LP01 95 aa9.51□□□□□ -0.89
RPAIN-203ENST00000381209 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
RPAIN-203ENST00000381209 RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
RPAIN-203ENST00000381209 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
RPAIN-203ENST00000381209 A8MUU9 505 aa9.46□□□□□ -0.89
RPAIN-203ENST00000381209 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
RPAIN-203ENST00000381209 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-203ENST00000381209 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
RPAIN-203ENST00000381209 TNXBP22105 4242 aa9.44□□□□□ -0.9
RPAIN-203ENST00000381209 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-203ENST00000381209 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
RPAIN-203ENST00000381209 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
RPAIN-203ENST00000381209 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.9
RPAIN-203ENST00000381209 HRES1P13985 223 aa9.4□□□□□ -0.91
RPAIN-203ENST00000381209 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.91
RPAIN-203ENST00000381209 IGKV2D-30A0A075B6S6 120 aa9.37□□□□□ -0.91
RPAIN-203ENST00000381209 Q75L30 129 aa9.36□□□□□ -0.91
RPAIN-203ENST00000381209 COA5Q86WW8 74 aa9.36□□□□□ -0.91
RPAIN-203ENST00000381209 C7orf65Q6ZTY9 151 aa9.35□□□□□ -0.91
RPAIN-203ENST00000381209 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
RPAIN-203ENST00000381209 ACYP2P14621 99 aa9.3□□□□□ -0.92
RPAIN-203ENST00000381209 C4orf26Q17RF5 130 aa9.29□□□□□ -0.92
RPAIN-203ENST00000381209 J3QL48 77 aa9.28□□□□□ -0.92
RPAIN-203ENST00000381209 Q1T7F1 81 aa9.27□□□□□ -0.93
RPAIN-203ENST00000381209 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
RPAIN-203ENST00000381209 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
RPAIN-203ENST00000381209 V9GYY9 64 aa9.24□□□□□ -0.93
RPAIN-203ENST00000381209 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
RPAIN-203ENST00000381209 XP32Q5T750 250 aa9.2□□□□□ -0.94
RPAIN-203ENST00000381209 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-203ENST00000381209 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
RPAIN-203ENST00000381209 SPINK7P58062 85 aa9.18□□□□□ -0.94
RPAIN-203ENST00000381209 MYCBP2O75592 4640 aa9.18□□□□□ -0.94
RPAIN-203ENST00000381209 A8MUN3 132 aa9.16□□□□□ -0.94
RPAIN-203ENST00000381209 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
RPAIN-203ENST00000381209 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
RPAIN-203ENST00000381209 HERC2O95714 4834 aa9.12□□□□□ -0.95
RPAIN-203ENST00000381209 LINC01558Q9Y6Z2 57 aa9.08□□□□□ -0.96
RPAIN-203ENST00000381209 PSPHP1O15172 72 aa9.05□□□□□ -0.96
RPAIN-203ENST00000381209 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
RPAIN-203ENST00000381209 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
RPAIN-203ENST00000381209 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
RPAIN-203ENST00000381209 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
RPAIN-203ENST00000381209 Q5VV11 94 aa9□□□□□ -0.97
RPAIN-203ENST00000381209 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
RPAIN-203ENST00000381209 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
RPAIN-203ENST00000381209 PCLOQ9Y6V0 5065 aa8.91□□□□□ -0.98
RPAIN-203ENST00000381209 BRK1Q8WUW1 75 aa8.86□□□□□ -0.99
RPAIN-203ENST00000381209 A0A1B0GU69 56 aa8.85□□□□□ -0.99
RPAIN-203ENST00000381209 PRO0628Q9UI54 55 aa8.82□□□□□ -1
RPAIN-203ENST00000381209 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms