RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 LAMA2P24043 3122 aaKnown RBP2.79□□□□□ -1.96
PTPRD-203ENST00000381196 GOLGB1Q14789 3259 aaKnown RBP2.78□□□□□ -1.96
PTPRD-203ENST00000381196 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
PTPRD-203ENST00000381196 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
PTPRD-203ENST00000381196 COL7A1Q02388 2944 aa2.76□□□□□ -1.97
PTPRD-203ENST00000381196 TNP1P09430 55 aa2.75□□□□□ -1.97
PTPRD-203ENST00000381196 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
PTPRD-203ENST00000381196 USP34Q70CQ2 3546 aa2.74□□□□□ -1.97
PTPRD-203ENST00000381196 H0YAA0 97 aa2.74□□□□□ -1.97
PTPRD-203ENST00000381196 DMXL1Q9Y485 3027 aa2.74□□□□□ -1.97
PTPRD-203ENST00000381196 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
PTPRD-203ENST00000381196 FRYQ5TBA9 3013 aa2.73□□□□□ -1.97
PTPRD-203ENST00000381196 FBN2P35556 2912 aa2.73□□□□□ -1.97
PTPRD-203ENST00000381196 P0C880 135 aa2.71□□□□□ -1.98
PTPRD-203ENST00000381196 Q6ZRN7 208 aaPredicted RBP2.71□□□□□ -1.98
PTPRD-203ENST00000381196 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.98
PTPRD-203ENST00000381196 INE1O15225 51 aa2.7□□□□□ -1.98
PTPRD-203ENST00000381196 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
PTPRD-203ENST00000381196 TRIOO75962 3097 aa2.7□□□□□ -1.98
PTPRD-203ENST00000381196 UTRNP46939 3433 aa2.69□□□□□ -1.98
PTPRD-203ENST00000381196 PCNTO95613 3336 aa2.67□□□□□ -1.98
PTPRD-203ENST00000381196 AKAP9Q99996 3911 aa2.66□□□□□ -1.98
PTPRD-203ENST00000381196 KRTAP7-1Q8IUC3 87 aa2.66□□□□□ -1.98
PTPRD-203ENST00000381196 CFAP54Q96N23 3096 aa2.66□□□□□ -1.98
PTPRD-203ENST00000381196 MEGF8Q7Z7M0 2845 aa2.65□□□□□ -1.99
PTPRD-203ENST00000381196 LAMA1P25391 3075 aa2.65□□□□□ -1.99
PTPRD-203ENST00000381196 DMXL2Q8TDJ6 3036 aa2.64□□□□□ -1.99
PTPRD-203ENST00000381196 C5orf42Q9H799 3197 aa2.64□□□□□ -1.99
PTPRD-203ENST00000381196 FBN1P35555 2871 aaKnown RBP2.62□□□□□ -1.99
PTPRD-203ENST00000381196 VPS13AQ96RL7 3174 aa2.62□□□□□ -1.99
PTPRD-203ENST00000381196 KRTAP13-2Q52LG2 175 aa2.61□□□□□ -1.99
PTPRD-203ENST00000381196 PRO2289Q9P1D8 64 aa2.61□□□□□ -1.99
PTPRD-203ENST00000381196 A8MU10 97 aa2.61□□□□□ -1.99
PTPRD-203ENST00000381196 FBN3Q75N90 2809 aa2.6□□□□□ -1.99
PTPRD-203ENST00000381196 PRUNE2Q8WUY3 3088 aa2.59□□□□□ -1.99
PTPRD-203ENST00000381196 COL12A1Q99715 3063 aa2.59□□□□□ -2
PTPRD-203ENST00000381196 REV3LO60673 3130 aa2.58□□□□□ -2
PTPRD-203ENST00000381196 SPTBN5Q9NRC6 3674 aaKnown RBP2.58□□□□□ -2
PTPRD-203ENST00000381196 KRTAP10-10P60014 251 aa2.56□□□□□ -2
PTPRD-203ENST00000381196 KRTAP10-8P60410 259 aa2.55□□□□□ -2
PTPRD-203ENST00000381196 TPRXLQ17RH7 258 aa2.55□□□□□ -2
PTPRD-203ENST00000381196 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
PTPRD-203ENST00000381196 BIRC6Q9NR09 4857 aa2.55□□□□□ -2
PTPRD-203ENST00000381196 ZFHX3Q15911 3703 aa2.55□□□□□ -2
PTPRD-203ENST00000381196 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
PTPRD-203ENST00000381196 XP32Q5T750 250 aa2.54□□□□□ -2
PTPRD-203ENST00000381196 A0A1B0GVY2 172 aa2.53□□□□□ -2
PTPRD-203ENST00000381196 KRTAP15-1Q3LI76 137 aa2.53□□□□□ -2
PTPRD-203ENST00000381196 KMT2CQ8NEZ4 4911 aaKnown RBP2.53□□□□□ -2
PTPRD-203ENST00000381196 RYR3Q15413 4870 aa2.53□□□□□ -2
PTPRD-203ENST00000381196 RANBP2P49792 3224 aaKnown RBP2.53□□□□□ -2.01
PTPRD-203ENST00000381196 CELSR1Q9NYQ6 3014 aa2.51□□□□□ -2.01
PTPRD-203ENST00000381196 ATMQ13315 3056 aa2.51□□□□□ -2.01
PTPRD-203ENST00000381196 KRTAP19-4Q3LI73 84 aa2.51□□□□□ -2.01
PTPRD-203ENST00000381196 EPPK1P58107 5090 aaKnown RBP2.5□□□□□ -2.01
PTPRD-203ENST00000381196 KRTAP1-4P0C5Y4 121 aa2.5□□□□□ -2.01
PTPRD-203ENST00000381196 ABCA13Q86UQ4 5058 aa2.5□□□□□ -2.01
PTPRD-203ENST00000381196 DNAH3Q8TD57 4116 aa2.49□□□□□ -2.01
PTPRD-203ENST00000381196 WDFY4Q6ZS81 3184 aa2.49□□□□□ -2.01
PTPRD-203ENST00000381196 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
PTPRD-203ENST00000381196 ANK2Q01484 3957 aa2.49□□□□□ -2.01
PTPRD-203ENST00000381196 CMYA5Q8N3K9 4069 aa2.48□□□□□ -2.01
PTPRD-203ENST00000381196 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
PTPRD-203ENST00000381196 XIRP2A4UGR9 3374 aa2.47□□□□□ -2.01
PTPRD-203ENST00000381196 NBPF19A0A087WUL8 3843 aa2.47□□□□□ -2.01
PTPRD-203ENST00000381196 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
PTPRD-203ENST00000381196 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
PTPRD-203ENST00000381196 LAMA3Q16787 3333 aa2.45□□□□□ -2.02
PTPRD-203ENST00000381196 FREM2Q5SZK8 3169 aa2.44□□□□□ -2.02
PTPRD-203ENST00000381196 SPENQ96T58 3664 aaKnown RBP2.44□□□□□ -2.02
PTPRD-203ENST00000381196 KRTAP12-2P59991 146 aa2.43□□□□□ -2.02
PTPRD-203ENST00000381196 LYSTQ99698 3801 aa2.43□□□□□ -2.02
PTPRD-203ENST00000381196 CFAP47Q6ZTR5 3102 aa2.42□□□□□ -2.02
PTPRD-203ENST00000381196 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
PTPRD-203ENST00000381196 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
PTPRD-203ENST00000381196 BOD1L1Q8NFC6 3051 aa2.41□□□□□ -2.02
PTPRD-203ENST00000381196 TRRAPQ9Y4A5 3859 aa2.41□□□□□ -2.02
PTPRD-203ENST00000381196 DNAH6Q9C0G6 4158 aa2.4□□□□□ -2.03
PTPRD-203ENST00000381196 CDH23Q9H251 3354 aa2.4□□□□□ -2.03
PTPRD-203ENST00000381196 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
PTPRD-203ENST00000381196 SZT2Q5T011 3432 aa2.39□□□□□ -2.03
PTPRD-203ENST00000381196 HERC2O95714 4834 aa2.39□□□□□ -2.03
PTPRD-203ENST00000381196 VPS13CQ709C8 3753 aa2.39□□□□□ -2.03
PTPRD-203ENST00000381196 BRCA2P51587 3418 aa2.39□□□□□ -2.03
PTPRD-203ENST00000381196 ADGRG4Q8IZF6 3080 aa2.38□□□□□ -2.03
PTPRD-203ENST00000381196 VCANP13611 3396 aa2.36□□□□□ -2.03
PTPRD-203ENST00000381196 KRTAP10-6P60371 365 aaPredicted RBP2.36□□□□□ -2.03
PTPRD-203ENST00000381196 MKI67P46013 3256 aaKnown RBP2.36□□□□□ -2.03
PTPRD-203ENST00000381196 BSNQ9UPA5 3926 aa2.36□□□□□ -2.03
PTPRD-203ENST00000381196 DNAH14Q0VDD8 3507 aa2.35□□□□□ -2.03
PTPRD-203ENST00000381196 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.03
PTPRD-203ENST00000381196 ZFHX4Q86UP3 3567 aa2.33□□□□□ -2.04
PTPRD-203ENST00000381196 CELSR3Q9NYQ7 3312 aa2.33□□□□□ -2.04
PTPRD-203ENST00000381196 LAMA5O15230 3695 aa2.32□□□□□ -2.04
PTPRD-203ENST00000381196 EYSQ5T1H1 3165 aa2.32□□□□□ -2.04
PTPRD-203ENST00000381196 DMDP11532 3685 aa2.3□□□□□ -2.04
PTPRD-203ENST00000381196 KRTAP3-1Q9BYR8 98 aa2.29□□□□□ -2.04
PTPRD-203ENST00000381196 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
PTPRD-203ENST00000381196 HERC1Q15751 4861 aa2.28□□□□□ -2.04
PTPRD-203ENST00000381196 WDFY3Q8IZQ1 3526 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms