RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 UBE2V1Q13404 147 aa5.05□□□□□ -1.6
HMGN1-202ENST00000380747 ATXN8Q156A1 80 aa5.05□□□□□ -1.6
HMGN1-202ENST00000380747 SS18L2Q9UHA2 77 aa5.05□□□□□ -1.6
HMGN1-202ENST00000380747 A0A1W2PNM2 257 aa5.04□□□□□ -1.6
HMGN1-202ENST00000380747 BAALC-AS2P0C853 105 aa5.04□□□□□ -1.6
HMGN1-202ENST00000380747 LYRM7Q5U5X0 104 aa5.03□□□□□ -1.6
HMGN1-202ENST00000380747 CCKP06307 115 aa5.01□□□□□ -1.61
HMGN1-202ENST00000380747 RBM3P98179 157 aaKnown RBP5.01□□□□□ -1.61
HMGN1-202ENST00000380747 VPS25Q9BRG1 176 aa5.01□□□□□ -1.61
HMGN1-202ENST00000380747 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
HMGN1-202ENST00000380747 DSCR8Q96T75 97 aa5□□□□□ -1.61
HMGN1-202ENST00000380747 TRBV20-1A0A075B6N2 111 aa4.99□□□□□ -1.61
HMGN1-202ENST00000380747 TAX1BP3O14907 124 aa4.99□□□□□ -1.61
HMGN1-202ENST00000380747 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
HMGN1-202ENST00000380747 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
HMGN1-202ENST00000380747 C9JAW5 83 aa4.98□□□□□ -1.61
HMGN1-202ENST00000380747 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
HMGN1-202ENST00000380747 OBSCN-AS1Q96MR7 158 aa4.98□□□□□ -1.61
HMGN1-202ENST00000380747 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
HMGN1-202ENST00000380747 A0A1W2PPM0 123 aa4.97□□□□□ -1.61
HMGN1-202ENST00000380747 RPL37P61927 97 aaKnown RBP4.97□□□□□ -1.61
HMGN1-202ENST00000380747 Q96NJ1 140 aa4.97□□□□□ -1.61
HMGN1-202ENST00000380747 SIGMAR1Q99720 223 aa4.97□□□□□ -1.61
HMGN1-202ENST00000380747 JMJD7-PLA2G4BH0Y9G9 81 aa4.96□□□□□ -1.62
HMGN1-202ENST00000380747 IGKV4-1P06312 121 aa4.96□□□□□ -1.62
HMGN1-202ENST00000380747 DEFB116Q30KQ4 102 aa4.95□□□□□ -1.62
HMGN1-202ENST00000380747 DSCR10P59022 87 aa4.94□□□□□ -1.62
HMGN1-202ENST00000380747 LOC110117498A0A087WWA1 95 aa4.93□□□□□ -1.62
HMGN1-202ENST00000380747 COL5A1-AS1Q5SY13 56 aa4.93□□□□□ -1.62
HMGN1-202ENST00000380747 Q6ZQT0 140 aa4.93□□□□□ -1.62
HMGN1-202ENST00000380747 MTURNQ8N3F0 131 aa4.93□□□□□ -1.62
HMGN1-202ENST00000380747 LINC00472Q9H8W2 130 aa4.93□□□□□ -1.62
HMGN1-202ENST00000380747 C14orf132Q9NPU4 83 aa4.93□□□□□ -1.62
HMGN1-202ENST00000380747 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
HMGN1-202ENST00000380747 SPCS1Q9Y6A9 102 aa4.92□□□□□ -1.62
HMGN1-202ENST00000380747 H3BT86 120 aa4.91□□□□□ -1.62
HMGN1-202ENST00000380747 PDE6GP18545 87 aa4.91□□□□□ -1.62
HMGN1-202ENST00000380747 Q75L30 129 aa4.91□□□□□ -1.62
HMGN1-202ENST00000380747 LINC00313P59037 77 aa4.9□□□□□ -1.63
HMGN1-202ENST00000380747 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
HMGN1-202ENST00000380747 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
HMGN1-202ENST00000380747 J3KT08 172 aa4.88□□□□□ -1.63
HMGN1-202ENST00000380747 A0A1B0GVX0 72 aa4.87□□□□□ -1.63
HMGN1-202ENST00000380747 A0A1B0GW54 56 aa4.87□□□□□ -1.63
HMGN1-202ENST00000380747 A8MUU9 505 aa4.87□□□□□ -1.63
HMGN1-202ENST00000380747 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
HMGN1-202ENST00000380747 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
HMGN1-202ENST00000380747 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
HMGN1-202ENST00000380747 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
HMGN1-202ENST00000380747 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
HMGN1-202ENST00000380747 K7EP34 96 aa4.85□□□□□ -1.63
HMGN1-202ENST00000380747 NDUFB1O75438 58 aa4.84□□□□□ -1.63
HMGN1-202ENST00000380747 NREPQ16612 68 aa4.84□□□□□ -1.63
HMGN1-202ENST00000380747 A8MWP4 228 aa4.82□□□□□ -1.64
HMGN1-202ENST00000380747 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
HMGN1-202ENST00000380747 MT1HP80294 61 aa4.81□□□□□ -1.64
HMGN1-202ENST00000380747 GTF2H5Q6ZYL4 71 aa4.81□□□□□ -1.64
HMGN1-202ENST00000380747 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
HMGN1-202ENST00000380747 IGKV3D-7A0A0C4DH55 119 aa4.8□□□□□ -1.64
HMGN1-202ENST00000380747 COX6B2Q6YFQ2 88 aa4.8□□□□□ -1.64
HMGN1-202ENST00000380747 C8orf17Q9NRJ1 99 aa4.8□□□□□ -1.64
HMGN1-202ENST00000380747 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
HMGN1-202ENST00000380747 BPY2O14599 106 aa4.77□□□□□ -1.65
HMGN1-202ENST00000380747 PRR15Q8IV56 129 aa4.77□□□□□ -1.65
HMGN1-202ENST00000380747 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
HMGN1-202ENST00000380747 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
HMGN1-202ENST00000380747 Q6ZVQ6 151 aa4.76□□□□□ -1.65
HMGN1-202ENST00000380747 F8W1H4 67 aa4.75□□□□□ -1.65
HMGN1-202ENST00000380747 K7EQZ3 153 aa4.75□□□□□ -1.65
HMGN1-202ENST00000380747 MMP24-AS1A0A0U1RRL7 71 aa4.74□□□□□ -1.65
HMGN1-202ENST00000380747 ZCCHC13Q8WW36 166 aaKnown RBP4.74□□□□□ -1.65
HMGN1-202ENST00000380747 ETDBQ3ZM63 59 aa4.73□□□□□ -1.65
HMGN1-202ENST00000380747 LINC00846Q9NV44 126 aa4.73□□□□□ -1.65
HMGN1-202ENST00000380747 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
HMGN1-202ENST00000380747 M0R2T5 61 aa4.72□□□□□ -1.65
HMGN1-202ENST00000380747 TMEM254Q8TBM7 123 aa4.72□□□□□ -1.65
HMGN1-202ENST00000380747 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
HMGN1-202ENST00000380747 UBL5Q9BZL1 73 aa4.72□□□□□ -1.65
HMGN1-202ENST00000380747 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
HMGN1-202ENST00000380747 Q8N9L7 120 aa4.71□□□□□ -1.66
HMGN1-202ENST00000380747 FAM236DA0A1B0GTK5 79 aa4.7□□□□□ -1.66
HMGN1-202ENST00000380747 NDUFS5O43920 106 aa4.7□□□□□ -1.66
HMGN1-202ENST00000380747 FAM236CP0DP71 79 aa4.7□□□□□ -1.66
HMGN1-202ENST00000380747 USH2AO75445 5202 aa4.69□□□□□ -1.66
HMGN1-202ENST00000380747 HRES1P13985 223 aa4.69□□□□□ -1.66
HMGN1-202ENST00000380747 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
HMGN1-202ENST00000380747 SPINK7P58062 85 aa4.68□□□□□ -1.66
HMGN1-202ENST00000380747 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
HMGN1-202ENST00000380747 CASC2Q6XLA1 102 aa4.67□□□□□ -1.66
HMGN1-202ENST00000380747 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
HMGN1-202ENST00000380747 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
HMGN1-202ENST00000380747 A0A1B0GV90 55 aa4.63□□□□□ -1.67
HMGN1-202ENST00000380747 ACYP1P07311 99 aa4.61□□□□□ -1.67
HMGN1-202ENST00000380747 CXCL6P80162 114 aa4.61□□□□□ -1.67
HMGN1-202ENST00000380747 Q5W150 140 aa4.61□□□□□ -1.67
HMGN1-202ENST00000380747 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
HMGN1-202ENST00000380747 FAM240AA0A1B0GVK7 77 aa4.57□□□□□ -1.68
HMGN1-202ENST00000380747 C7orf65Q6ZTY9 151 aa4.57□□□□□ -1.68
HMGN1-202ENST00000380747 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
HMGN1-202ENST00000380747 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms