RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
RAB3IP-204ENST00000378815 C1orf195Q5TG92 126 aa8.84□□□□□ -0.99
RAB3IP-204ENST00000378815 SPINK1P00995 79 aa8.83□□□□□ -1
RAB3IP-204ENST00000378815 A0A0U1RQV1 116 aa8.81□□□□□ -1
RAB3IP-204ENST00000378815 NOTCH2NLQ7Z3S9 236 aa8.81□□□□□ -1
RAB3IP-204ENST00000378815 FAM229AH3BQW9 127 aa8.8□□□□□ -1
RAB3IP-204ENST00000378815 C5orf47Q569G3 176 aa8.8□□□□□ -1
RAB3IP-204ENST00000378815 LINC00304Q8N9R0 145 aa8.8□□□□□ -1
RAB3IP-204ENST00000378815 H7BZZ5 65 aa8.79□□□□□ -1
RAB3IP-204ENST00000378815 HSPG2P98160 4391 aa8.79□□□□□ -1
RAB3IP-204ENST00000378815 TMEM258P61165 79 aa8.78□□□□□ -1
RAB3IP-204ENST00000378815 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
RAB3IP-204ENST00000378815 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
RAB3IP-204ENST00000378815 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
RAB3IP-204ENST00000378815 NDUFC1O43677 76 aa8.76□□□□□ -1.01
RAB3IP-204ENST00000378815 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
RAB3IP-204ENST00000378815 Q5VSD8 79 aa8.75□□□□□ -1.01
RAB3IP-204ENST00000378815 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
RAB3IP-204ENST00000378815 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
RAB3IP-204ENST00000378815 TP53AIP1Q9HCN2 124 aa8.73□□□□□ -1.01
RAB3IP-204ENST00000378815 MP68P56378 58 aa8.71□□□□□ -1.01
RAB3IP-204ENST00000378815 RYR1P21817 5038 aa8.71□□□□□ -1.02
RAB3IP-204ENST00000378815 H0Y9P7 68 aa8.7□□□□□ -1.02
RAB3IP-204ENST00000378815 LINC00313P59037 77 aa8.7□□□□□ -1.02
RAB3IP-204ENST00000378815 NDUFS5O43920 106 aa8.69□□□□□ -1.02
RAB3IP-204ENST00000378815 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
RAB3IP-204ENST00000378815 TRAV22A0A0B4J277 110 aa8.68□□□□□ -1.02
RAB3IP-204ENST00000378815 H3BPC8 53 aa8.68□□□□□ -1.02
RAB3IP-204ENST00000378815 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
RAB3IP-204ENST00000378815 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
RAB3IP-204ENST00000378815 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
RAB3IP-204ENST00000378815 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
RAB3IP-204ENST00000378815 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-204ENST00000378815 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
RAB3IP-204ENST00000378815 KRTAP10-8P60410 259 aa8.62□□□□□ -1.03
RAB3IP-204ENST00000378815 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
RAB3IP-204ENST00000378815 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
RAB3IP-204ENST00000378815 Q8N1X5 172 aa8.61□□□□□ -1.03
RAB3IP-204ENST00000378815 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
RAB3IP-204ENST00000378815 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
RAB3IP-204ENST00000378815 TNXBP22105 4242 aa8.58□□□□□ -1.04
RAB3IP-204ENST00000378815 RPS28P62857 69 aaKnown RBP8.57□□□□□ -1.04
RAB3IP-204ENST00000378815 Q5W150 140 aa8.57□□□□□ -1.04
RAB3IP-204ENST00000378815 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
RAB3IP-204ENST00000378815 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
RAB3IP-204ENST00000378815 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
RAB3IP-204ENST00000378815 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
RAB3IP-204ENST00000378815 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
RAB3IP-204ENST00000378815 LOC101927531A0A1B0GV80 90 aa8.49□□□□□ -1.05
RAB3IP-204ENST00000378815 OXTP01178 125 aa8.49□□□□□ -1.05
RAB3IP-204ENST00000378815 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
RAB3IP-204ENST00000378815 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
RAB3IP-204ENST00000378815 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
RAB3IP-204ENST00000378815 PCOTHQ58A44 107 aa8.46□□□□□ -1.06
RAB3IP-204ENST00000378815 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
RAB3IP-204ENST00000378815 PRR4Q16378 134 aa8.44□□□□□ -1.06
RAB3IP-204ENST00000378815 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
RAB3IP-204ENST00000378815 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
RAB3IP-204ENST00000378815 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
RAB3IP-204ENST00000378815 A8MUU9 505 aa8.4□□□□□ -1.06
RAB3IP-204ENST00000378815 IGKV2-30P06310 120 aa8.4□□□□□ -1.07
RAB3IP-204ENST00000378815 FP248Q71RG6 208 aaPredicted RBP8.4□□□□□ -1.07
RAB3IP-204ENST00000378815 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
RAB3IP-204ENST00000378815 DMBT1Q9UGM3 2413 aaPredicted RBP8.36□□□□□ -1.07
RAB3IP-204ENST00000378815 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
RAB3IP-204ENST00000378815 Q75L30 129 aa8.31□□□□□ -1.08
RAB3IP-204ENST00000378815 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
RAB3IP-204ENST00000378815 HRES1P13985 223 aa8.3□□□□□ -1.08
RAB3IP-204ENST00000378815 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
RAB3IP-204ENST00000378815 COA5Q86WW8 74 aa8.24□□□□□ -1.09
RAB3IP-204ENST00000378815 DMAC1Q96GE9 116 aa8.22□□□□□ -1.09
RAB3IP-204ENST00000378815 XP32Q5T750 250 aa8.21□□□□□ -1.09
RAB3IP-204ENST00000378815 BIRC6Q9NR09 4857 aa8.21□□□□□ -1.1
RAB3IP-204ENST00000378815 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
RAB3IP-204ENST00000378815 ACYP2P14621 99 aa8.17□□□□□ -1.1
RAB3IP-204ENST00000378815 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
RAB3IP-204ENST00000378815 HERC2O95714 4834 aa8.16□□□□□ -1.1
RAB3IP-204ENST00000378815 ATP11AUNQ6ZP68 121 aa8.16□□□□□ -1.1
RAB3IP-204ENST00000378815 SPINK7P58062 85 aa8.15□□□□□ -1.1
RAB3IP-204ENST00000378815 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
RAB3IP-204ENST00000378815 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
RAB3IP-204ENST00000378815 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
RAB3IP-204ENST00000378815 Q1T7F1 81 aa8.12□□□□□ -1.11
RAB3IP-204ENST00000378815 J3QL48 77 aa8.08□□□□□ -1.12
RAB3IP-204ENST00000378815 A8MUN3 132 aa8.06□□□□□ -1.12
RAB3IP-204ENST00000378815 V9GYY9 64 aa8.04□□□□□ -1.12
RAB3IP-204ENST00000378815 CHKB-CPT1BH3BT56 60 aa8.04□□□□□ -1.12
RAB3IP-204ENST00000378815 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
RAB3IP-204ENST00000378815 COX6B2Q6YFQ2 88 aa7.97□□□□□ -1.13
RAB3IP-204ENST00000378815 PSPHP1O15172 72 aa7.97□□□□□ -1.13
RAB3IP-204ENST00000378815 LINC01558Q9Y6Z2 57 aa7.96□□□□□ -1.13
RAB3IP-204ENST00000378815 LPAP08519 4548 aa7.96□□□□□ -1.14
RAB3IP-204ENST00000378815 LRP2P98164 4655 aa7.94□□□□□ -1.14
RAB3IP-204ENST00000378815 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
RAB3IP-204ENST00000378815 Q5VV11 94 aa7.9□□□□□ -1.14
RAB3IP-204ENST00000378815 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
RAB3IP-204ENST00000378815 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
RAB3IP-204ENST00000378815 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
RAB3IP-204ENST00000378815 A0A1B0GU69 56 aa7.77□□□□□ -1.17
RAB3IP-204ENST00000378815 BRK1Q8WUW1 75 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms