RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PSPHP1O15172 72 aa11.58□□□□□ -0.56
SSU72-204ENST00000378726 MOBPQ13875 183 aa11.58□□□□□ -0.56
SSU72-204ENST00000378726 SEC61GP60059 68 aa11.57□□□□□ -0.56
SSU72-204ENST00000378726 CASC2Q6XLA1 102 aa11.57□□□□□ -0.56
SSU72-204ENST00000378726 LINC00208Q96KT6 92 aa11.57□□□□□ -0.56
SSU72-204ENST00000378726 LINC00472Q9H8W2 130 aa11.56□□□□□ -0.56
SSU72-204ENST00000378726 VPS13BQ7Z7G8 4022 aa11.54□□□□□ -0.56
SSU72-204ENST00000378726 A8MWP4 228 aa11.54□□□□□ -0.56
SSU72-204ENST00000378726 H0Y9P7 68 aa11.52□□□□□ -0.56
SSU72-204ENST00000378726 PMAIP1Q13794 54 aa11.52□□□□□ -0.56
SSU72-204ENST00000378726 A8MUN3 132 aa11.47□□□□□ -0.57
SSU72-204ENST00000378726 SPANXA2-OT1Q8N9U9 137 aa11.47□□□□□ -0.57
SSU72-204ENST00000378726 H3BPC8 53 aa11.45□□□□□ -0.58
SSU72-204ENST00000378726 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
SSU72-204ENST00000378726 MMP24-AS1A0A0U1RRL7 71 aa11.44□□□□□ -0.58
SSU72-204ENST00000378726 SSBP3-AS1Q7Z2R9 100 aa11.44□□□□□ -0.58
SSU72-204ENST00000378726 A0A087X002 238 aa11.42□□□□□ -0.58
SSU72-204ENST00000378726 APOBP04114 4563 aaKnown RBP11.42□□□□□ -0.58
SSU72-204ENST00000378726 Q5VV11 94 aa11.41□□□□□ -0.58
SSU72-204ENST00000378726 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
SSU72-204ENST00000378726 KRTAP1-4P0C5Y4 121 aa11.39□□□□□ -0.59
SSU72-204ENST00000378726 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
SSU72-204ENST00000378726 Q96NJ1 140 aa11.38□□□□□ -0.59
SSU72-204ENST00000378726 RYR3Q15413 4870 aa11.37□□□□□ -0.59
SSU72-204ENST00000378726 Q8N9P0 234 aaPredicted RBP11.37□□□□□ -0.59
SSU72-204ENST00000378726 SPINK6Q6UWN8 80 aa11.36□□□□□ -0.59
SSU72-204ENST00000378726 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
SSU72-204ENST00000378726 FAT1Q14517 4588 aa11.35□□□□□ -0.59
SSU72-204ENST00000378726 CD164Q04900 197 aa11.35□□□□□ -0.59
SSU72-204ENST00000378726 CHKB-CPT1BH3BT56 60 aa11.33□□□□□ -0.6
SSU72-204ENST00000378726 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
SSU72-204ENST00000378726 A8MU10 97 aa11.29□□□□□ -0.6
SSU72-204ENST00000378726 PRR15LQ9BU68 103 aa11.29□□□□□ -0.6
SSU72-204ENST00000378726 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
SSU72-204ENST00000378726 PCOTHQ58A44 107 aa11.27□□□□□ -0.61
SSU72-204ENST00000378726 IGLV7-46A0A075B6I9 117 aa11.27□□□□□ -0.61
SSU72-204ENST00000378726 KRTAP10-4P60372 401 aaPredicted RBP11.26□□□□□ -0.61
SSU72-204ENST00000378726 COA5Q86WW8 74 aa11.24□□□□□ -0.61
SSU72-204ENST00000378726 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
SSU72-204ENST00000378726 IGHV6-1A0A0B4J1U7 121 aa11.24□□□□□ -0.61
SSU72-204ENST00000378726 Q75L30 129 aa11.24□□□□□ -0.61
SSU72-204ENST00000378726 TP53AIP1Q9HCN2 124 aa11.24□□□□□ -0.61
SSU72-204ENST00000378726 LOC101927531A0A1B0GV80 90 aa11.22□□□□□ -0.61
SSU72-204ENST00000378726 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
SSU72-204ENST00000378726 CDK2AP2O75956 126 aa11.21□□□□□ -0.61
SSU72-204ENST00000378726 NDUFS5O43920 106 aa11.2□□□□□ -0.62
SSU72-204ENST00000378726 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
SSU72-204ENST00000378726 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
SSU72-204ENST00000378726 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
SSU72-204ENST00000378726 NOTCH2NLQ7Z3S9 236 aa11.19□□□□□ -0.62
SSU72-204ENST00000378726 A6NED7 52 aa11.17□□□□□ -0.62
SSU72-204ENST00000378726 LCA10Q71F78 164 aa11.17□□□□□ -0.62
SSU72-204ENST00000378726 KTN1-AS1Q86SY8 53 aa11.16□□□□□ -0.62
SSU72-204ENST00000378726 SPTSSBQ8NFR3 76 aa11.16□□□□□ -0.62
SSU72-204ENST00000378726 MRPL34Q9BQ48 92 aaKnown RBP11.15□□□□□ -0.62
SSU72-204ENST00000378726 FAM229AH3BQW9 127 aa11.15□□□□□ -0.63
SSU72-204ENST00000378726 SPINK1P00995 79 aa11.12□□□□□ -0.63
SSU72-204ENST00000378726 CDC42SE1Q9NRR8 79 aa11.09□□□□□ -0.63
SSU72-204ENST00000378726 HSPG2P98160 4391 aa11.09□□□□□ -0.63
SSU72-204ENST00000378726 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
SSU72-204ENST00000378726 LINC01558Q9Y6Z2 57 aa11.09□□□□□ -0.63
SSU72-204ENST00000378726 A6NN06 94 aa11.05□□□□□ -0.64
SSU72-204ENST00000378726 SPAG11AQ6PDA7 123 aa11.05□□□□□ -0.64
SSU72-204ENST00000378726 HRES1P13985 223 aa11.05□□□□□ -0.64
SSU72-204ENST00000378726 Q5VSD8 79 aa11.04□□□□□ -0.64
SSU72-204ENST00000378726 RYR1P21817 5038 aa11.03□□□□□ -0.64
SSU72-204ENST00000378726 Q5W150 140 aa11.02□□□□□ -0.65
SSU72-204ENST00000378726 RPS29P62273 56 aaKnown RBP11□□□□□ -0.65
SSU72-204ENST00000378726 RBM12B-AS1Q9P1G2 102 aa11□□□□□ -0.65
SSU72-204ENST00000378726 C8orf87E5RJ46 101 aa10.99□□□□□ -0.65
SSU72-204ENST00000378726 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
SSU72-204ENST00000378726 LINC00313P59037 77 aa10.97□□□□□ -0.65
SSU72-204ENST00000378726 KRTAP13-3Q3SY46 172 aa10.97□□□□□ -0.65
SSU72-204ENST00000378726 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
SSU72-204ENST00000378726 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
SSU72-204ENST00000378726 KIAA1109Q2LD37 5005 aa10.93□□□□□ -0.66
SSU72-204ENST00000378726 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
SSU72-204ENST00000378726 SPINK7P58062 85 aa10.91□□□□□ -0.66
SSU72-204ENST00000378726 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.66
SSU72-204ENST00000378726 KRTAP10-8P60410 259 aa10.85□□□□□ -0.67
SSU72-204ENST00000378726 Q8N1X5 172 aa10.85□□□□□ -0.67
SSU72-204ENST00000378726 KRTAP16-1A8MUX0 517 aa10.82□□□□□ -0.68
SSU72-204ENST00000378726 TNXBP22105 4242 aa10.82□□□□□ -0.68
SSU72-204ENST00000378726 RETNLBQ9BQ08 111 aa10.81□□□□□ -0.68
SSU72-204ENST00000378726 ACYP2P14621 99 aa10.8□□□□□ -0.68
SSU72-204ENST00000378726 FAT3Q8TDW7 4589 aa10.77□□□□□ -0.68
SSU72-204ENST00000378726 FLG2Q5D862 2391 aaPredicted RBP10.76□□□□□ -0.69
SSU72-204ENST00000378726 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
SSU72-204ENST00000378726 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
SSU72-204ENST00000378726 MYCBP2O75592 4640 aa10.69□□□□□ -0.7
SSU72-204ENST00000378726 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
SSU72-204ENST00000378726 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
SSU72-204ENST00000378726 MT1HL1P0DM35 61 aa10.64□□□□□ -0.71
SSU72-204ENST00000378726 KRTAP4-5Q9BYR2 181 aa10.6□□□□□ -0.71
SSU72-204ENST00000378726 A0A1B0GU69 56 aa10.59□□□□□ -0.71
SSU72-204ENST00000378726 IGKV2D-30A0A075B6S6 120 aa10.57□□□□□ -0.72
SSU72-204ENST00000378726 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
SSU72-204ENST00000378726 A8MUU9 505 aa10.55□□□□□ -0.72
SSU72-204ENST00000378726 SPATA8Q6RVD6 105 aa10.55□□□□□ -0.72
SSU72-204ENST00000378726 PRAC1Q96KF2 57 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms