RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
USP9X-202ENST00000378308 A8MU10 97 aa7.66□□□□□ -1.18
USP9X-202ENST00000378308 ADGRG4Q8IZF6 3080 aa7.64□□□□□ -1.19
USP9X-202ENST00000378308 TNP1P09430 55 aa7.64□□□□□ -1.19
USP9X-202ENST00000378308 ASPMQ8IZT6 3477 aa7.62□□□□□ -1.19
USP9X-202ENST00000378308 HIVEP1P15822 2718 aa7.61□□□□□ -1.19
USP9X-202ENST00000378308 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
USP9X-202ENST00000378308 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.2
USP9X-202ENST00000378308 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
USP9X-202ENST00000378308 NBPF19A0A087WUL8 3843 aa7.58□□□□□ -1.2
USP9X-202ENST00000378308 NDUFAF8A1L188 74 aa7.58□□□□□ -1.2
USP9X-202ENST00000378308 TACC2O95359 2948 aa7.57□□□□□ -1.2
USP9X-202ENST00000378308 MYO15AQ9UKN7 3530 aa7.57□□□□□ -1.2
USP9X-202ENST00000378308 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
USP9X-202ENST00000378308 KRTAP10-8P60410 259 aa7.52□□□□□ -1.21
USP9X-202ENST00000378308 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
USP9X-202ENST00000378308 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
USP9X-202ENST00000378308 CELSR2Q9HCU4 2923 aa7.5□□□□□ -1.21
USP9X-202ENST00000378308 CHD9Q3L8U1 2897 aa7.49□□□□□ -1.21
USP9X-202ENST00000378308 DMXL1Q9Y485 3027 aa7.49□□□□□ -1.21
USP9X-202ENST00000378308 FLNCQ14315 2725 aa7.48□□□□□ -1.21
USP9X-202ENST00000378308 EYSQ5T1H1 3165 aa7.47□□□□□ -1.21
USP9X-202ENST00000378308 KRTAP29-1A8MX34 341 aaPredicted RBP7.47□□□□□ -1.21
USP9X-202ENST00000378308 LAMA5O15230 3695 aa7.46□□□□□ -1.21
USP9X-202ENST00000378308 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
USP9X-202ENST00000378308 LOC400499M0QZD8 3231 aa7.43□□□□□ -1.22
USP9X-202ENST00000378308 NF1P21359 2839 aa7.43□□□□□ -1.22
USP9X-202ENST00000378308 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
USP9X-202ENST00000378308 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
USP9X-202ENST00000378308 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
USP9X-202ENST00000378308 NBEAQ8NFP9 2946 aa7.42□□□□□ -1.22
USP9X-202ENST00000378308 ZFHX4Q86UP3 3567 aa7.4□□□□□ -1.22
USP9X-202ENST00000378308 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
USP9X-202ENST00000378308 P0C880 135 aa7.34□□□□□ -1.23
USP9X-202ENST00000378308 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
USP9X-202ENST00000378308 A6NN06 94 aa7.32□□□□□ -1.24
USP9X-202ENST00000378308 DCHS1Q96JQ0 3298 aa7.3□□□□□ -1.24
USP9X-202ENST00000378308 NIPBLQ6KC79 2804 aaeCLIP7.3□□□□□ -1.24
USP9X-202ENST00000378308 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
USP9X-202ENST00000378308 TENM3Q9P273 2699 aa7.27□□□□□ -1.25
USP9X-202ENST00000378308 DCHS2Q6V1P9 2916 aa7.27□□□□□ -1.25
USP9X-202ENST00000378308 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
USP9X-202ENST00000378308 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
USP9X-202ENST00000378308 SPENQ96T58 3664 aaKnown RBP7.23□□□□□ -1.25
USP9X-202ENST00000378308 RELNP78509 3460 aa7.22□□□□□ -1.25
USP9X-202ENST00000378308 VWFP04275 2813 aa7.15□□□□□ -1.26
USP9X-202ENST00000378308 TGP01266 2768 aa7.15□□□□□ -1.27
USP9X-202ENST00000378308 KRTAP7-1Q8IUC3 87 aa7.14□□□□□ -1.27
USP9X-202ENST00000378308 CSMD1Q96PZ7 3565 aa7.14□□□□□ -1.27
USP9X-202ENST00000378308 FBN2P35556 2912 aa7.13□□□□□ -1.27
USP9X-202ENST00000378308 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
USP9X-202ENST00000378308 XP32Q5T750 250 aa7.12□□□□□ -1.27
USP9X-202ENST00000378308 SMG1Q96Q15 3661 aaKnown RBP7.11□□□□□ -1.27
USP9X-202ENST00000378308 PKD1L1Q8TDX9 2849 aa7.11□□□□□ -1.27
USP9X-202ENST00000378308 PDZD2O15018 2839 aa7.11□□□□□ -1.27
USP9X-202ENST00000378308 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
USP9X-202ENST00000378308 ZANQ9Y493 2812 aa7.09□□□□□ -1.27
USP9X-202ENST00000378308 ZFHX3Q15911 3703 aa7.09□□□□□ -1.27
USP9X-202ENST00000378308 DMDP11532 3685 aa7.01□□□□□ -1.29
USP9X-202ENST00000378308 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
USP9X-202ENST00000378308 H0YAA0 97 aa6.99□□□□□ -1.29
USP9X-202ENST00000378308 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
USP9X-202ENST00000378308 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
USP9X-202ENST00000378308 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
USP9X-202ENST00000378308 HRNRQ86YZ3 2850 aaPredicted RBP6.86□□□□□ -1.31
USP9X-202ENST00000378308 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
USP9X-202ENST00000378308 CUBNO60494 3623 aa6.84□□□□□ -1.32
USP9X-202ENST00000378308 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
USP9X-202ENST00000378308 COL7A1Q02388 2944 aa6.77□□□□□ -1.33
USP9X-202ENST00000378308 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
USP9X-202ENST00000378308 SVEP1Q4LDE5 3571 aa6.74□□□□□ -1.33
USP9X-202ENST00000378308 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
USP9X-202ENST00000378308 MEGF8Q7Z7M0 2845 aa6.72□□□□□ -1.33
USP9X-202ENST00000378308 VPS13CQ709C8 3753 aa6.71□□□□□ -1.34
USP9X-202ENST00000378308 MUC3AQ02505 3323 aa6.6□□□□□ -1.35
USP9X-202ENST00000378308 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
USP9X-202ENST00000378308 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
USP9X-202ENST00000378308 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
USP9X-202ENST00000378308 CSMD3Q7Z407 3707 aa6.53□□□□□ -1.36
USP9X-202ENST00000378308 CSMD2Q7Z408 3487 aa6.52□□□□□ -1.37
USP9X-202ENST00000378308 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
USP9X-202ENST00000378308 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
USP9X-202ENST00000378308 KRTAP12-1P59990 96 aa6.4□□□□□ -1.39
USP9X-202ENST00000378308 AKAP9Q99996 3911 aa6.38□□□□□ -1.39
USP9X-202ENST00000378308 FBN3Q75N90 2809 aa6.37□□□□□ -1.39
USP9X-202ENST00000378308 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
USP9X-202ENST00000378308 OTOGQ6ZRI0 2925 aa6.25□□□□□ -1.41
USP9X-202ENST00000378308 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
USP9X-202ENST00000378308 INE1O15225 51 aa6.1□□□□□ -1.43
USP9X-202ENST00000378308 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
USP9X-202ENST00000378308 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
USP9X-202ENST00000378308 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
USP9X-202ENST00000378308 KRTAP12-3P60328 96 aa5.9□□□□□ -1.47
USP9X-202ENST00000378308 LYSTQ99698 3801 aa5.89□□□□□ -1.47
USP9X-202ENST00000378308 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
USP9X-202ENST00000378308 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
USP9X-202ENST00000378308 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
USP9X-202ENST00000378308 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
USP9X-202ENST00000378308 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
USP9X-202ENST00000378308 ANK3Q12955 4377 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms