RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 KRTAP13-2Q52LG2 175 aa11.25□□□□□ -0.61
PCDHA4-201ENST00000378125 C1orf64Q8NEQ6 169 aa11.25□□□□□ -0.61
PCDHA4-201ENST00000378125 PKHD1P08F94 4074 aa11.25□□□□□ -0.61
PCDHA4-201ENST00000378125 SACSQ9NZJ4 4579 aa11.24□□□□□ -0.61
PCDHA4-201ENST00000378125 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
PCDHA4-201ENST00000378125 SSBP3-AS1Q7Z2R9 100 aa11.23□□□□□ -0.61
PCDHA4-201ENST00000378125 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
PCDHA4-201ENST00000378125 MRPL34Q9BQ48 92 aaKnown RBP11.19□□□□□ -0.62
PCDHA4-201ENST00000378125 MPLKIPQ8TAP9 179 aa11.18□□□□□ -0.62
PCDHA4-201ENST00000378125 CD164Q04900 197 aa11.17□□□□□ -0.62
PCDHA4-201ENST00000378125 H3BPC8 53 aa11.15□□□□□ -0.62
PCDHA4-201ENST00000378125 KRTAP1-4P0C5Y4 121 aa11.15□□□□□ -0.62
PCDHA4-201ENST00000378125 PCOTHQ58A44 107 aa11.14□□□□□ -0.63
PCDHA4-201ENST00000378125 TP53AIP1Q9HCN2 124 aa11.14□□□□□ -0.63
PCDHA4-201ENST00000378125 PLA2G1BP04054 148 aaKnown RBP11.1□□□□□ -0.63
PCDHA4-201ENST00000378125 CYP4F30PQ9H0H9 118 aa11.1□□□□□ -0.63
PCDHA4-201ENST00000378125 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
PCDHA4-201ENST00000378125 C1orf195Q5TG92 126 aa11.08□□□□□ -0.64
PCDHA4-201ENST00000378125 DYNC1H1Q14204 4646 aaKnown RBP11.06□□□□□ -0.64
PCDHA4-201ENST00000378125 LINC00336Q6ZUF6 198 aa11.06□□□□□ -0.64
PCDHA4-201ENST00000378125 Q5W150 140 aa11.05□□□□□ -0.64
PCDHA4-201ENST00000378125 SPANXA2-OT1Q8N9U9 137 aa11.03□□□□□ -0.64
PCDHA4-201ENST00000378125 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
PCDHA4-201ENST00000378125 LINC00313P59037 77 aa11.02□□□□□ -0.65
PCDHA4-201ENST00000378125 RETNLBQ9BQ08 111 aa11.01□□□□□ -0.65
PCDHA4-201ENST00000378125 PRO0628Q9UI54 55 aa11.01□□□□□ -0.65
PCDHA4-201ENST00000378125 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
PCDHA4-201ENST00000378125 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
PCDHA4-201ENST00000378125 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
PCDHA4-201ENST00000378125 IGLV7-46A0A075B6I9 117 aa10.96□□□□□ -0.65
PCDHA4-201ENST00000378125 FAT1Q14517 4588 aa10.96□□□□□ -0.66
PCDHA4-201ENST00000378125 LIMD2Q9BT23 127 aa10.95□□□□□ -0.66
PCDHA4-201ENST00000378125 A0A1B0GVY2 172 aa10.94□□□□□ -0.66
PCDHA4-201ENST00000378125 KMT2CQ8NEZ4 4911 aaKnown RBP10.94□□□□□ -0.66
PCDHA4-201ENST00000378125 RYR2Q92736 4967 aa10.93□□□□□ -0.66
PCDHA4-201ENST00000378125 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
PCDHA4-201ENST00000378125 APOBP04114 4563 aaKnown RBP10.9□□□□□ -0.66
PCDHA4-201ENST00000378125 COA5Q86WW8 74 aa10.89□□□□□ -0.67
PCDHA4-201ENST00000378125 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
PCDHA4-201ENST00000378125 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
PCDHA4-201ENST00000378125 PSPHP1O15172 72 aa10.88□□□□□ -0.67
PCDHA4-201ENST00000378125 BRK1Q8WUW1 75 aa10.87□□□□□ -0.67
PCDHA4-201ENST00000378125 SPINK1P00995 79 aa10.87□□□□□ -0.67
PCDHA4-201ENST00000378125 Q1T7F1 81 aa10.87□□□□□ -0.67
PCDHA4-201ENST00000378125 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
PCDHA4-201ENST00000378125 LINC00304Q8N9R0 145 aa10.85□□□□□ -0.67
PCDHA4-201ENST00000378125 FAM229AH3BQW9 127 aa10.81□□□□□ -0.68
PCDHA4-201ENST00000378125 KRTAP10-4P60372 401 aaPredicted RBP10.79□□□□□ -0.68
PCDHA4-201ENST00000378125 HRES1P13985 223 aa10.78□□□□□ -0.68
PCDHA4-201ENST00000378125 A8MUN3 132 aa10.78□□□□□ -0.68
PCDHA4-201ENST00000378125 IGKV2D-30A0A075B6S6 120 aa10.72□□□□□ -0.69
PCDHA4-201ENST00000378125 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
PCDHA4-201ENST00000378125 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
PCDHA4-201ENST00000378125 V9GYY9 64 aa10.69□□□□□ -0.7
PCDHA4-201ENST00000378125 PRR15LQ9BU68 103 aa10.68□□□□□ -0.7
PCDHA4-201ENST00000378125 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
PCDHA4-201ENST00000378125 RPS29P62273 56 aaKnown RBP10.66□□□□□ -0.7
PCDHA4-201ENST00000378125 Q5VV11 94 aa10.66□□□□□ -0.7
PCDHA4-201ENST00000378125 PKHD1L1Q86WI1 4243 aa10.65□□□□□ -0.7
PCDHA4-201ENST00000378125 RYR3Q15413 4870 aa10.63□□□□□ -0.71
PCDHA4-201ENST00000378125 ACYP2P14621 99 aa10.61□□□□□ -0.71
PCDHA4-201ENST00000378125 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
PCDHA4-201ENST00000378125 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
PCDHA4-201ENST00000378125 LRP1Q07954 4544 aaKnown RBP10.57□□□□□ -0.72
PCDHA4-201ENST00000378125 A8MU10 97 aa10.55□□□□□ -0.72
PCDHA4-201ENST00000378125 LINC01558Q9Y6Z2 57 aa10.52□□□□□ -0.73
PCDHA4-201ENST00000378125 HSPG2P98160 4391 aa10.51□□□□□ -0.73
PCDHA4-201ENST00000378125 Q5VSD8 79 aa10.5□□□□□ -0.73
PCDHA4-201ENST00000378125 C7orf65Q6ZTY9 151 aa10.5□□□□□ -0.73
PCDHA4-201ENST00000378125 Q8N1X5 172 aa10.49□□□□□ -0.73
PCDHA4-201ENST00000378125 Q75L30 129 aa10.46□□□□□ -0.73
PCDHA4-201ENST00000378125 FLG2Q5D862 2391 aaPredicted RBP10.46□□□□□ -0.73
PCDHA4-201ENST00000378125 A6NED7 52 aa10.45□□□□□ -0.74
PCDHA4-201ENST00000378125 TNXBP22105 4242 aa10.43□□□□□ -0.74
PCDHA4-201ENST00000378125 A8MUU9 505 aa10.42□□□□□ -0.74
PCDHA4-201ENST00000378125 C20orf166-AS1Q96NR2 134 aa10.42□□□□□ -0.74
PCDHA4-201ENST00000378125 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
PCDHA4-201ENST00000378125 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
PCDHA4-201ENST00000378125 RYR1P21817 5038 aa10.39□□□□□ -0.75
PCDHA4-201ENST00000378125 SEC61GP60059 68 aa10.38□□□□□ -0.75
PCDHA4-201ENST00000378125 SPINK7P58062 85 aa10.37□□□□□ -0.75
PCDHA4-201ENST00000378125 LCA10Q71F78 164 aa10.36□□□□□ -0.75
PCDHA4-201ENST00000378125 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
PCDHA4-201ENST00000378125 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
PCDHA4-201ENST00000378125 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
PCDHA4-201ENST00000378125 DMBT1Q9UGM3 2413 aaPredicted RBP10.31□□□□□ -0.76
PCDHA4-201ENST00000378125 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
PCDHA4-201ENST00000378125 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
PCDHA4-201ENST00000378125 A0A1B0GU69 56 aa10.28□□□□□ -0.76
PCDHA4-201ENST00000378125 EPPK1P58107 5090 aaKnown RBP10.26□□□□□ -0.77
PCDHA4-201ENST00000378125 CDC42SE1Q9NRR8 79 aa10.23□□□□□ -0.77
PCDHA4-201ENST00000378125 KRTAP3-1Q9BYR8 98 aa10.21□□□□□ -0.77
PCDHA4-201ENST00000378125 ATP11AUNQ6ZP68 121 aa10.15□□□□□ -0.78
PCDHA4-201ENST00000378125 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
PCDHA4-201ENST00000378125 XP32Q5T750 250 aa10.1□□□□□ -0.79
PCDHA4-201ENST00000378125 RPL37P61927 97 aaKnown RBP10.07□□□□□ -0.8
PCDHA4-201ENST00000378125 KTN1-AS1Q86SY8 53 aa10.07□□□□□ -0.8
PCDHA4-201ENST00000378125 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
PCDHA4-201ENST00000378125 A6NN06 94 aa10.01□□□□□ -0.81
PCDHA4-201ENST00000378125 UQCR11O14957 56 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms