RNA–Protein interactions for RNA: ENST00000378016.4

SSPO-201, Transcript of SCO-spondin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSPO, Length 15,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-201ENST00000378016 HTTP42858 3142 aa4.83□□□□□ -1.64
SSPO-201ENST00000378016 UTRNP46939 3433 aa4.83□□□□□ -1.64
SSPO-201ENST00000378016 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
SSPO-201ENST00000378016 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
SSPO-201ENST00000378016 ADGRG4Q8IZF6 3080 aa4.8□□□□□ -1.64
SSPO-201ENST00000378016 COL6A3P12111 3177 aa4.79□□□□□ -1.64
SSPO-201ENST00000378016 LAMA1P25391 3075 aa4.79□□□□□ -1.64
SSPO-201ENST00000378016 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
SSPO-201ENST00000378016 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
SSPO-201ENST00000378016 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
SSPO-201ENST00000378016 PKD1L1Q8TDX9 2849 aa4.75□□□□□ -1.65
SSPO-201ENST00000378016 MKI67P46013 3256 aaKnown RBP4.75□□□□□ -1.65
SSPO-201ENST00000378016 ZZEF1O43149 2961 aa4.74□□□□□ -1.65
SSPO-201ENST00000378016 TNRC18O15417 2968 aaPredicted RBP4.74□□□□□ -1.65
SSPO-201ENST00000378016 ATMQ13315 3056 aa4.73□□□□□ -1.65
SSPO-201ENST00000378016 RANBP2P49792 3224 aaKnown RBP4.73□□□□□ -1.65
SSPO-201ENST00000378016 ZANQ9Y493 2812 aa4.73□□□□□ -1.65
SSPO-201ENST00000378016 Q5VSD8 79 aa4.7□□□□□ -1.66
SSPO-201ENST00000378016 H0YAA0 97 aa4.68□□□□□ -1.66
SSPO-201ENST00000378016 CDH23Q9H251 3354 aa4.68□□□□□ -1.66
SSPO-201ENST00000378016 P0C880 135 aa4.68□□□□□ -1.66
SSPO-201ENST00000378016 KRTAP13-1Q8IUC0 172 aa4.67□□□□□ -1.66
SSPO-201ENST00000378016 TNP1P09430 55 aa4.67□□□□□ -1.66
SSPO-201ENST00000378016 CELSR3Q9NYQ7 3312 aa4.67□□□□□ -1.66
SSPO-201ENST00000378016 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
SSPO-201ENST00000378016 FBN2P35556 2912 aa4.66□□□□□ -1.66
SSPO-201ENST00000378016 VWFP04275 2813 aa4.64□□□□□ -1.67
SSPO-201ENST00000378016 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
SSPO-201ENST00000378016 TGP01266 2768 aa4.63□□□□□ -1.67
SSPO-201ENST00000378016 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
SSPO-201ENST00000378016 RPS29P62273 56 aaKnown RBP4.62□□□□□ -1.67
SSPO-201ENST00000378016 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
SSPO-201ENST00000378016 LAMA3Q16787 3333 aa4.59□□□□□ -1.68
SSPO-201ENST00000378016 CELSR1Q9NYQ6 3014 aa4.57□□□□□ -1.68
SSPO-201ENST00000378016 XIRP2A4UGR9 3374 aa4.56□□□□□ -1.68
SSPO-201ENST00000378016 TENM2Q9NT68 2774 aa4.51□□□□□ -1.69
SSPO-201ENST00000378016 DCHS1Q96JQ0 3298 aa4.44□□□□□ -1.7
SSPO-201ENST00000378016 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
SSPO-201ENST00000378016 COL7A1Q02388 2944 aa4.4□□□□□ -1.71
SSPO-201ENST00000378016 MXRA5Q9NR99 2828 aa4.39□□□□□ -1.71
SSPO-201ENST00000378016 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
SSPO-201ENST00000378016 KRTAP1-4P0C5Y4 121 aa4.37□□□□□ -1.71
SSPO-201ENST00000378016 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
SSPO-201ENST00000378016 SZT2Q5T011 3432 aa4.35□□□□□ -1.71
SSPO-201ENST00000378016 XP32Q5T750 250 aa4.33□□□□□ -1.72
SSPO-201ENST00000378016 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
SSPO-201ENST00000378016 OTOGQ6ZRI0 2925 aa4.31□□□□□ -1.72
SSPO-201ENST00000378016 SPEGQ15772 3267 aa4.3□□□□□ -1.72
SSPO-201ENST00000378016 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
SSPO-201ENST00000378016 DNAH14Q0VDD8 3507 aa4.28□□□□□ -1.72
SSPO-201ENST00000378016 EYSQ5T1H1 3165 aa4.28□□□□□ -1.72
SSPO-201ENST00000378016 VCANP13611 3396 aa4.27□□□□□ -1.73
SSPO-201ENST00000378016 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
SSPO-201ENST00000378016 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
SSPO-201ENST00000378016 BRCA2P51587 3418 aa4.24□□□□□ -1.73
SSPO-201ENST00000378016 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
SSPO-201ENST00000378016 MEGF8Q7Z7M0 2845 aa4.24□□□□□ -1.73
SSPO-201ENST00000378016 FBN3Q75N90 2809 aa4.23□□□□□ -1.73
SSPO-201ENST00000378016 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
SSPO-201ENST00000378016 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.74
SSPO-201ENST00000378016 AKAP9Q99996 3911 aa4.2□□□□□ -1.74
SSPO-201ENST00000378016 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
SSPO-201ENST00000378016 DNAH11Q96DT5 4516 aa4.19□□□□□ -1.74
SSPO-201ENST00000378016 LOC400499M0QZD8 3231 aa4.17□□□□□ -1.74
SSPO-201ENST00000378016 MYO15AQ9UKN7 3530 aa4.15□□□□□ -1.75
SSPO-201ENST00000378016 DNAH2Q9P225 4427 aa4.14□□□□□ -1.75
SSPO-201ENST00000378016 HUWE1Q7Z6Z7 4374 aaKnown RBP4.13□□□□□ -1.75
SSPO-201ENST00000378016 NBPF19A0A087WUL8 3843 aa4.13□□□□□ -1.75
SSPO-201ENST00000378016 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
SSPO-201ENST00000378016 ZFHX3Q15911 3703 aa4.13□□□□□ -1.75
SSPO-201ENST00000378016 ALMS1Q8TCU4 4167 aa4.13□□□□□ -1.75
SSPO-201ENST00000378016 USP34Q70CQ2 3546 aa4.13□□□□□ -1.75
SSPO-201ENST00000378016 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
SSPO-201ENST00000378016 INE1O15225 51 aa4.11□□□□□ -1.75
SSPO-201ENST00000378016 SPTBN5Q9NRC6 3674 aaKnown RBP4.07□□□□□ -1.76
SSPO-201ENST00000378016 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
SSPO-201ENST00000378016 DNAH1Q9P2D7 4330 aa4.06□□□□□ -1.76
SSPO-201ENST00000378016 ANK3Q12955 4377 aaKnown RBP4.05□□□□□ -1.76
SSPO-201ENST00000378016 KRTAP3-2Q9BYR7 98 aa3.98□□□□□ -1.77
SSPO-201ENST00000378016 DMDP11532 3685 aa3.95□□□□□ -1.78
SSPO-201ENST00000378016 TRRAPQ9Y4A5 3859 aa3.95□□□□□ -1.78
SSPO-201ENST00000378016 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
SSPO-201ENST00000378016 WDFY3Q8IZQ1 3526 aa3.93□□□□□ -1.78
SSPO-201ENST00000378016 LAMA5O15230 3695 aa3.91□□□□□ -1.78
SSPO-201ENST00000378016 SMG1Q96Q15 3661 aaKnown RBP3.91□□□□□ -1.78
SSPO-201ENST00000378016 CMYA5Q8N3K9 4069 aa3.87□□□□□ -1.79
SSPO-201ENST00000378016 ZFHX4Q86UP3 3567 aa3.87□□□□□ -1.79
SSPO-201ENST00000378016 CUBNO60494 3623 aa3.86□□□□□ -1.79
SSPO-201ENST00000378016 DNAH17Q9UFH2 4485 aa3.86□□□□□ -1.79
SSPO-201ENST00000378016 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
SSPO-201ENST00000378016 KRTAP21-3Q3LHN1 58 aa3.84□□□□□ -1.79
SSPO-201ENST00000378016 ASPMQ8IZT6 3477 aa3.81□□□□□ -1.8
SSPO-201ENST00000378016 PLECQ15149 4684 aaKnown RBP3.81□□□□□ -1.8
SSPO-201ENST00000378016 CSMD1Q96PZ7 3565 aa3.8□□□□□ -1.8
SSPO-201ENST00000378016 DNAH3Q8TD57 4116 aa3.79□□□□□ -1.8
SSPO-201ENST00000378016 RELNP78509 3460 aa3.79□□□□□ -1.8
SSPO-201ENST00000378016 CSMD3Q7Z407 3707 aa3.79□□□□□ -1.8
SSPO-201ENST00000378016 FRAS1Q86XX4 4008 aa3.78□□□□□ -1.8
SSPO-201ENST00000378016 VPS13CQ709C8 3753 aa3.78□□□□□ -1.8
SSPO-201ENST00000378016 SPENQ96T58 3664 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms