RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.46
RNF38-206ENST00000377885 ZNF469Q96JG9 3925 aaPredicted RBP5.96□□□□□ -1.46
RNF38-206ENST00000377885 A0A087X002 238 aa5.95□□□□□ -1.46
RNF38-206ENST00000377885 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
RNF38-206ENST00000377885 TENM1Q9UKZ4 2725 aa5.95□□□□□ -1.46
RNF38-206ENST00000377885 NOTCH1P46531 2555 aa5.95□□□□□ -1.46
RNF38-206ENST00000377885 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
RNF38-206ENST00000377885 TENM3Q9P273 2699 aa5.94□□□□□ -1.46
RNF38-206ENST00000377885 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
RNF38-206ENST00000377885 MGAM2Q2M2H8 2515 aa5.93□□□□□ -1.46
RNF38-206ENST00000377885 Q5W150 140 aa5.93□□□□□ -1.46
RNF38-206ENST00000377885 C1orf134Q5TEV5 83 aa5.92□□□□□ -1.46
RNF38-206ENST00000377885 SPINK1P00995 79 aa5.91□□□□□ -1.46
RNF38-206ENST00000377885 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
RNF38-206ENST00000377885 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
RNF38-206ENST00000377885 Q6ZRN7 208 aaPredicted RBP5.87□□□□□ -1.47
RNF38-206ENST00000377885 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
RNF38-206ENST00000377885 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
RNF38-206ENST00000377885 NBEAL1Q6ZS30 2694 aa5.86□□□□□ -1.47
RNF38-206ENST00000377885 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
RNF38-206ENST00000377885 FBN1P35555 2871 aaKnown RBP5.84□□□□□ -1.47
RNF38-206ENST00000377885 LY6G6CO95867 125 aa5.84□□□□□ -1.47
RNF38-206ENST00000377885 K7ERS5 55 aa5.83□□□□□ -1.48
RNF38-206ENST00000377885 TRRAPQ9Y4A5 3859 aa5.8□□□□□ -1.48
RNF38-206ENST00000377885 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
RNF38-206ENST00000377885 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
RNF38-206ENST00000377885 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
RNF38-206ENST00000377885 CSAG1Q6PB30 78 aa5.75□□□□□ -1.49
RNF38-206ENST00000377885 Q8N1X5 172 aa5.75□□□□□ -1.49
RNF38-206ENST00000377885 STAB2Q8WWQ8 2551 aa5.74□□□□□ -1.49
RNF38-206ENST00000377885 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
RNF38-206ENST00000377885 A0A1B0GU33 70 aa5.66□□□□□ -1.5
RNF38-206ENST00000377885 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
RNF38-206ENST00000377885 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
RNF38-206ENST00000377885 H3BS24 57 aa5.64□□□□□ -1.51
RNF38-206ENST00000377885 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
RNF38-206ENST00000377885 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
RNF38-206ENST00000377885 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
RNF38-206ENST00000377885 TENM2Q9NT68 2774 aa5.59□□□□□ -1.51
RNF38-206ENST00000377885 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
RNF38-206ENST00000377885 KRTAP10-1P60331 282 aa5.57□□□□□ -1.52
RNF38-206ENST00000377885 HUWE1Q7Z6Z7 4374 aaKnown RBP5.57□□□□□ -1.52
RNF38-206ENST00000377885 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
RNF38-206ENST00000377885 ANK2Q01484 3957 aa5.55□□□□□ -1.52
RNF38-206ENST00000377885 Q6ZSA8 131 aa5.53□□□□□ -1.52
RNF38-206ENST00000377885 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
RNF38-206ENST00000377885 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
RNF38-206ENST00000377885 A8MUU9 505 aa5.51□□□□□ -1.53
RNF38-206ENST00000377885 KRTAP1-4P0C5Y4 121 aa5.51□□□□□ -1.53
RNF38-206ENST00000377885 H0YAA0 97 aa5.5□□□□□ -1.53
RNF38-206ENST00000377885 DNAH10Q8IVF4 4471 aa5.49□□□□□ -1.53
RNF38-206ENST00000377885 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
RNF38-206ENST00000377885 TGP01266 2768 aa5.46□□□□□ -1.53
RNF38-206ENST00000377885 ROMO1P60602 79 aa5.45□□□□□ -1.54
RNF38-206ENST00000377885 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
RNF38-206ENST00000377885 CMYA5Q8N3K9 4069 aa5.45□□□□□ -1.54
RNF38-206ENST00000377885 FBN3Q75N90 2809 aa5.44□□□□□ -1.54
RNF38-206ENST00000377885 DNHD1Q96M86 4753 aa5.44□□□□□ -1.54
RNF38-206ENST00000377885 SMR3BP02814 79 aaPredicted RBP5.44□□□□□ -1.54
RNF38-206ENST00000377885 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
RNF38-206ENST00000377885 A0A0D9SG42 100 aa5.43□□□□□ -1.54
RNF38-206ENST00000377885 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
RNF38-206ENST00000377885 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
RNF38-206ENST00000377885 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
RNF38-206ENST00000377885 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
RNF38-206ENST00000377885 CSMD3Q7Z407 3707 aa5.42□□□□□ -1.54
RNF38-206ENST00000377885 DNAH3Q8TD57 4116 aa5.42□□□□□ -1.54
RNF38-206ENST00000377885 ALMS1Q8TCU4 4167 aa5.4□□□□□ -1.55
RNF38-206ENST00000377885 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
RNF38-206ENST00000377885 FLG2Q5D862 2391 aaPredicted RBP5.33□□□□□ -1.56
RNF38-206ENST00000377885 S4R3F8 94 aa5.33□□□□□ -1.56
RNF38-206ENST00000377885 PLECQ15149 4684 aaKnown RBP5.31□□□□□ -1.56
RNF38-206ENST00000377885 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
RNF38-206ENST00000377885 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
RNF38-206ENST00000377885 PRKDCP78527 4128 aaKnown RBP5.29□□□□□ -1.56
RNF38-206ENST00000377885 LYSTQ99698 3801 aa5.27□□□□□ -1.57
RNF38-206ENST00000377885 DMBT1Q9UGM3 2413 aaPredicted RBP5.26□□□□□ -1.57
RNF38-206ENST00000377885 DYNC2H1Q8NCM8 4307 aaKnown RBP5.25□□□□□ -1.57
RNF38-206ENST00000377885 DNAH17Q9UFH2 4485 aa5.25□□□□□ -1.57
RNF38-206ENST00000377885 VPS13DQ5THJ4 4388 aa5.25□□□□□ -1.57
RNF38-206ENST00000377885 FRAS1Q86XX4 4008 aa5.19□□□□□ -1.58
RNF38-206ENST00000377885 DNAH7Q8WXX0 4024 aa5.18□□□□□ -1.58
RNF38-206ENST00000377885 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
RNF38-206ENST00000377885 STARD9Q9P2P6 4700 aa5.15□□□□□ -1.58
RNF38-206ENST00000377885 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
RNF38-206ENST00000377885 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
RNF38-206ENST00000377885 DNAH2Q9P225 4427 aa5.13□□□□□ -1.59
RNF38-206ENST00000377885 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
RNF38-206ENST00000377885 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
RNF38-206ENST00000377885 P0C880 135 aa5.12□□□□□ -1.59
RNF38-206ENST00000377885 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
RNF38-206ENST00000377885 M0QZ58 72 aa5.11□□□□□ -1.59
RNF38-206ENST00000377885 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
RNF38-206ENST00000377885 DNAH11Q96DT5 4516 aa5.09□□□□□ -1.59
RNF38-206ENST00000377885 KMT2AQ03164 3969 aa5.07□□□□□ -1.6
RNF38-206ENST00000377885 XP32Q5T750 250 aa5.07□□□□□ -1.6
RNF38-206ENST00000377885 Q5VSD8 79 aa5.06□□□□□ -1.6
RNF38-206ENST00000377885 KRTAP3-3Q9BYR6 98 aa5.04□□□□□ -1.6
RNF38-206ENST00000377885 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
RNF38-206ENST00000377885 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms