RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 V9GYY9 64 aa6.91□□□□□ -1.3
TNFRSF9-201ENST00000377507 SSBP3-AS1Q7Z2R9 100 aa6.91□□□□□ -1.3
TNFRSF9-201ENST00000377507 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
TNFRSF9-201ENST00000377507 LY6G6CO95867 125 aa6.89□□□□□ -1.31
TNFRSF9-201ENST00000377507 CIRBP-AS1Q8TBR5 109 aa6.89□□□□□ -1.31
TNFRSF9-201ENST00000377507 DNAH6Q9C0G6 4158 aa6.88□□□□□ -1.31
TNFRSF9-201ENST00000377507 NDUFS5O43920 106 aa6.88□□□□□ -1.31
TNFRSF9-201ENST00000377507 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
TNFRSF9-201ENST00000377507 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
TNFRSF9-201ENST00000377507 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
TNFRSF9-201ENST00000377507 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
TNFRSF9-201ENST00000377507 PSPHP1O15172 72 aa6.86□□□□□ -1.31
TNFRSF9-201ENST00000377507 KRTAP13-3Q3SY46 172 aa6.86□□□□□ -1.31
TNFRSF9-201ENST00000377507 PCOTHQ58A44 107 aa6.86□□□□□ -1.31
TNFRSF9-201ENST00000377507 Q6ZSA8 131 aa6.86□□□□□ -1.31
TNFRSF9-201ENST00000377507 COA5Q86WW8 74 aa6.86□□□□□ -1.31
TNFRSF9-201ENST00000377507 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
TNFRSF9-201ENST00000377507 DNAH5Q8TE73 4624 aa6.85□□□□□ -1.31
TNFRSF9-201ENST00000377507 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
TNFRSF9-201ENST00000377507 TGP01266 2768 aa6.84□□□□□ -1.31
TNFRSF9-201ENST00000377507 SPINK6Q6UWN8 80 aa6.84□□□□□ -1.32
TNFRSF9-201ENST00000377507 A8MUN3 132 aa6.83□□□□□ -1.32
TNFRSF9-201ENST00000377507 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
TNFRSF9-201ENST00000377507 LOC101927531A0A1B0GV80 90 aa6.82□□□□□ -1.32
TNFRSF9-201ENST00000377507 Q5VV11 94 aa6.82□□□□□ -1.32
TNFRSF9-201ENST00000377507 Q5W150 140 aa6.82□□□□□ -1.32
TNFRSF9-201ENST00000377507 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
TNFRSF9-201ENST00000377507 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
TNFRSF9-201ENST00000377507 LCE2BO14633 110 aa6.78□□□□□ -1.32
TNFRSF9-201ENST00000377507 HRES1P13985 223 aa6.76□□□□□ -1.33
TNFRSF9-201ENST00000377507 KRTAP1-4P0C5Y4 121 aa6.76□□□□□ -1.33
TNFRSF9-201ENST00000377507 PKD1P98161 4303 aa6.75□□□□□ -1.33
TNFRSF9-201ENST00000377507 LINC00313P59037 77 aa6.75□□□□□ -1.33
TNFRSF9-201ENST00000377507 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
TNFRSF9-201ENST00000377507 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
TNFRSF9-201ENST00000377507 Q75L30 129 aa6.74□□□□□ -1.33
TNFRSF9-201ENST00000377507 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
TNFRSF9-201ENST00000377507 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
TNFRSF9-201ENST00000377507 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
TNFRSF9-201ENST00000377507 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
TNFRSF9-201ENST00000377507 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
TNFRSF9-201ENST00000377507 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
TNFRSF9-201ENST00000377507 SPAG11AQ6PDA7 123 aa6.69□□□□□ -1.34
TNFRSF9-201ENST00000377507 A8MU10 97 aa6.66□□□□□ -1.34
TNFRSF9-201ENST00000377507 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
TNFRSF9-201ENST00000377507 ACYP2P14621 99 aa6.66□□□□□ -1.34
TNFRSF9-201ENST00000377507 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
TNFRSF9-201ENST00000377507 VPS13BQ7Z7G8 4022 aa6.64□□□□□ -1.35
TNFRSF9-201ENST00000377507 LCA10Q71F78 164 aa6.64□□□□□ -1.35
TNFRSF9-201ENST00000377507 SPINK1P00995 79 aa6.64□□□□□ -1.35
TNFRSF9-201ENST00000377507 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
TNFRSF9-201ENST00000377507 PRR26Q8N8Z3 221 aa6.63□□□□□ -1.35
TNFRSF9-201ENST00000377507 A6NED7 52 aa6.62□□□□□ -1.35
TNFRSF9-201ENST00000377507 TYMSOSQ8TAI1 123 aa6.62□□□□□ -1.35
TNFRSF9-201ENST00000377507 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
TNFRSF9-201ENST00000377507 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
TNFRSF9-201ENST00000377507 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
TNFRSF9-201ENST00000377507 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
TNFRSF9-201ENST00000377507 ATP11AUNQ6ZP68 121 aa6.59□□□□□ -1.35
TNFRSF9-201ENST00000377507 PMAIP1Q13794 54 aa6.57□□□□□ -1.36
TNFRSF9-201ENST00000377507 SPINK7P58062 85 aa6.55□□□□□ -1.36
TNFRSF9-201ENST00000377507 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
TNFRSF9-201ENST00000377507 LINC00304Q8N9R0 145 aa6.53□□□□□ -1.36
TNFRSF9-201ENST00000377507 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.37
TNFRSF9-201ENST00000377507 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
TNFRSF9-201ENST00000377507 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
TNFRSF9-201ENST00000377507 A6NN06 94 aa6.48□□□□□ -1.37
TNFRSF9-201ENST00000377507 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
TNFRSF9-201ENST00000377507 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
TNFRSF9-201ENST00000377507 C7orf65Q6ZTY9 151 aa6.46□□□□□ -1.38
TNFRSF9-201ENST00000377507 A0A1B0GU69 56 aa6.45□□□□□ -1.38
TNFRSF9-201ENST00000377507 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
TNFRSF9-201ENST00000377507 J3QL48 77 aa6.44□□□□□ -1.38
TNFRSF9-201ENST00000377507 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF9-201ENST00000377507 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
TNFRSF9-201ENST00000377507 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
TNFRSF9-201ENST00000377507 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
TNFRSF9-201ENST00000377507 A8MUU9 505 aa6.42□□□□□ -1.38
TNFRSF9-201ENST00000377507 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.39
TNFRSF9-201ENST00000377507 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.39
TNFRSF9-201ENST00000377507 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
TNFRSF9-201ENST00000377507 Q8N1X5 172 aa6.36□□□□□ -1.39
TNFRSF9-201ENST00000377507 FAT1Q14517 4588 aa6.36□□□□□ -1.39
TNFRSF9-201ENST00000377507 UQCR11O14957 56 aa6.35□□□□□ -1.39
TNFRSF9-201ENST00000377507 C9orf92A6NGG3 77 aa6.34□□□□□ -1.39
TNFRSF9-201ENST00000377507 SEC61GP60059 68 aa6.33□□□□□ -1.4
TNFRSF9-201ENST00000377507 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
TNFRSF9-201ENST00000377507 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
TNFRSF9-201ENST00000377507 RYR2Q92736 4967 aa6.29□□□□□ -1.4
TNFRSF9-201ENST00000377507 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
TNFRSF9-201ENST00000377507 KMT2CQ8NEZ4 4911 aaKnown RBP6.27□□□□□ -1.41
TNFRSF9-201ENST00000377507 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
TNFRSF9-201ENST00000377507 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
TNFRSF9-201ENST00000377507 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
TNFRSF9-201ENST00000377507 COX6B2Q6YFQ2 88 aa6.19□□□□□ -1.42
TNFRSF9-201ENST00000377507 TNXBP22105 4242 aa6.18□□□□□ -1.42
TNFRSF9-201ENST00000377507 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
TNFRSF9-201ENST00000377507 RYR3Q15413 4870 aa6.15□□□□□ -1.43
TNFRSF9-201ENST00000377507 H0YAA0 97 aa6.15□□□□□ -1.43
TNFRSF9-201ENST00000377507 Q5VSD8 79 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms