RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PANO1I0J062 215 aa5.22□□□□□ -1.57
SHROOM4-202ENST00000376020 M0QZ58 72 aa5.21□□□□□ -1.58
SHROOM4-202ENST00000376020 C9orf92A6NGG3 77 aa5.2□□□□□ -1.58
SHROOM4-202ENST00000376020 VCANP13611 3396 aa5.19□□□□□ -1.58
SHROOM4-202ENST00000376020 PKD1L1Q8TDX9 2849 aa5.19□□□□□ -1.58
SHROOM4-202ENST00000376020 Q6ZSA8 131 aa5.18□□□□□ -1.58
SHROOM4-202ENST00000376020 COL6A3P12111 3177 aa5.18□□□□□ -1.58
SHROOM4-202ENST00000376020 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
SHROOM4-202ENST00000376020 TENM2Q9NT68 2774 aa5.17□□□□□ -1.58
SHROOM4-202ENST00000376020 CELSR1Q9NYQ6 3014 aa5.17□□□□□ -1.58
SHROOM4-202ENST00000376020 NOTCH2NLQ7Z3S9 236 aa5.16□□□□□ -1.58
SHROOM4-202ENST00000376020 R4GN34 69 aa5.16□□□□□ -1.58
SHROOM4-202ENST00000376020 KRTAP13-1Q8IUC0 172 aa5.15□□□□□ -1.59
SHROOM4-202ENST00000376020 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
SHROOM4-202ENST00000376020 CELSR3Q9NYQ7 3312 aa5.13□□□□□ -1.59
SHROOM4-202ENST00000376020 CFAP47Q6ZTR5 3102 aa5.12□□□□□ -1.59
SHROOM4-202ENST00000376020 CDH23Q9H251 3354 aa5.11□□□□□ -1.59
SHROOM4-202ENST00000376020 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
SHROOM4-202ENST00000376020 J3QL48 77 aa5.1□□□□□ -1.59
SHROOM4-202ENST00000376020 PP632Q6XCG6 107 aa5.09□□□□□ -1.6
SHROOM4-202ENST00000376020 DNAH14Q0VDD8 3507 aa5.08□□□□□ -1.6
SHROOM4-202ENST00000376020 REV3LO60673 3130 aa5.05□□□□□ -1.6
SHROOM4-202ENST00000376020 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
SHROOM4-202ENST00000376020 A8MUU9 505 aa5.01□□□□□ -1.61
SHROOM4-202ENST00000376020 FBN1P35555 2871 aaKnown RBP5.01□□□□□ -1.61
SHROOM4-202ENST00000376020 Q6ZRN7 208 aaPredicted RBP5.01□□□□□ -1.61
SHROOM4-202ENST00000376020 COL7A1Q02388 2944 aa5□□□□□ -1.61
SHROOM4-202ENST00000376020 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
SHROOM4-202ENST00000376020 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
SHROOM4-202ENST00000376020 EYSQ5T1H1 3165 aa4.96□□□□□ -1.62
SHROOM4-202ENST00000376020 SMR3BP02814 79 aaPredicted RBP4.95□□□□□ -1.62
SHROOM4-202ENST00000376020 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
SHROOM4-202ENST00000376020 MYO15AQ9UKN7 3530 aa4.93□□□□□ -1.62
SHROOM4-202ENST00000376020 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
SHROOM4-202ENST00000376020 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
SHROOM4-202ENST00000376020 SZT2Q5T011 3432 aa4.91□□□□□ -1.62
SHROOM4-202ENST00000376020 SPTBN5Q9NRC6 3674 aaKnown RBP4.9□□□□□ -1.62
SHROOM4-202ENST00000376020 LOC400499M0QZD8 3231 aa4.89□□□□□ -1.63
SHROOM4-202ENST00000376020 A8MU10 97 aa4.88□□□□□ -1.63
SHROOM4-202ENST00000376020 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
SHROOM4-202ENST00000376020 KRTAP10-1P60331 282 aa4.87□□□□□ -1.63
SHROOM4-202ENST00000376020 TNP1P09430 55 aa4.87□□□□□ -1.63
SHROOM4-202ENST00000376020 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
SHROOM4-202ENST00000376020 FBN3Q75N90 2809 aa4.84□□□□□ -1.63
SHROOM4-202ENST00000376020 H0YAA0 97 aa4.82□□□□□ -1.64
SHROOM4-202ENST00000376020 KRTAP10-2P60368 255 aa4.82□□□□□ -1.64
SHROOM4-202ENST00000376020 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
SHROOM4-202ENST00000376020 P0C880 135 aa4.8□□□□□ -1.64
SHROOM4-202ENST00000376020 Q5VSD8 79 aa4.8□□□□□ -1.64
SHROOM4-202ENST00000376020 SPEGQ15772 3267 aa4.79□□□□□ -1.64
SHROOM4-202ENST00000376020 M0R2T5 61 aa4.76□□□□□ -1.65
SHROOM4-202ENST00000376020 OTOGQ6ZRI0 2925 aa4.75□□□□□ -1.65
SHROOM4-202ENST00000376020 ZFHX3Q15911 3703 aa4.71□□□□□ -1.66
SHROOM4-202ENST00000376020 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
SHROOM4-202ENST00000376020 KRTAP21-3Q3LHN1 58 aa4.69□□□□□ -1.66
SHROOM4-202ENST00000376020 WDFY3Q8IZQ1 3526 aa4.67□□□□□ -1.66
SHROOM4-202ENST00000376020 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
SHROOM4-202ENST00000376020 SPENQ96T58 3664 aaKnown RBP4.63□□□□□ -1.67
SHROOM4-202ENST00000376020 DCHS1Q96JQ0 3298 aa4.6□□□□□ -1.67
SHROOM4-202ENST00000376020 XP32Q5T750 250 aa4.58□□□□□ -1.68
SHROOM4-202ENST00000376020 LAMA5O15230 3695 aa4.58□□□□□ -1.68
SHROOM4-202ENST00000376020 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
SHROOM4-202ENST00000376020 RELNP78509 3460 aa4.56□□□□□ -1.68
SHROOM4-202ENST00000376020 ASPMQ8IZT6 3477 aa4.51□□□□□ -1.69
SHROOM4-202ENST00000376020 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
SHROOM4-202ENST00000376020 ZFHX4Q86UP3 3567 aa4.49□□□□□ -1.69
SHROOM4-202ENST00000376020 TRRAPQ9Y4A5 3859 aa4.49□□□□□ -1.69
SHROOM4-202ENST00000376020 NBPF19A0A087WUL8 3843 aa4.49□□□□□ -1.69
SHROOM4-202ENST00000376020 SMG1Q96Q15 3661 aaKnown RBP4.48□□□□□ -1.69
SHROOM4-202ENST00000376020 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
SHROOM4-202ENST00000376020 DMDP11532 3685 aa4.45□□□□□ -1.7
SHROOM4-202ENST00000376020 INE1O15225 51 aa4.42□□□□□ -1.7
SHROOM4-202ENST00000376020 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.7
SHROOM4-202ENST00000376020 AKAP9Q99996 3911 aa4.4□□□□□ -1.7
SHROOM4-202ENST00000376020 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
SHROOM4-202ENST00000376020 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
SHROOM4-202ENST00000376020 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
SHROOM4-202ENST00000376020 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
SHROOM4-202ENST00000376020 CSMD1Q96PZ7 3565 aa4.33□□□□□ -1.72
SHROOM4-202ENST00000376020 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SHROOM4-202ENST00000376020 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SHROOM4-202ENST00000376020 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
SHROOM4-202ENST00000376020 MUC3AQ02505 3323 aa4.28□□□□□ -1.72
SHROOM4-202ENST00000376020 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
SHROOM4-202ENST00000376020 CUBNO60494 3623 aa4.22□□□□□ -1.73
SHROOM4-202ENST00000376020 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
SHROOM4-202ENST00000376020 BSNQ9UPA5 3926 aa4.18□□□□□ -1.74
SHROOM4-202ENST00000376020 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
SHROOM4-202ENST00000376020 ALMS1Q8TCU4 4167 aa4.12□□□□□ -1.75
SHROOM4-202ENST00000376020 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
SHROOM4-202ENST00000376020 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
SHROOM4-202ENST00000376020 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
SHROOM4-202ENST00000376020 CSMD2Q7Z408 3487 aa3.98□□□□□ -1.77
SHROOM4-202ENST00000376020 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
SHROOM4-202ENST00000376020 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
SHROOM4-202ENST00000376020 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
SHROOM4-202ENST00000376020 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
SHROOM4-202ENST00000376020 LYSTQ99698 3801 aa3.89□□□□□ -1.79
SHROOM4-202ENST00000376020 CMYA5Q8N3K9 4069 aa3.88□□□□□ -1.79
SHROOM4-202ENST00000376020 KRTAP10-4P60372 401 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms