RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
MSH5-201ENST00000375703 C1orf134Q5TEV5 83 aa8.61□□□□□ -1.03
MSH5-201ENST00000375703 Q5VV11 94 aa8.61□□□□□ -1.03
MSH5-201ENST00000375703 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
MSH5-201ENST00000375703 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
MSH5-201ENST00000375703 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
MSH5-201ENST00000375703 KTN1-AS1Q86SY8 53 aa8.6□□□□□ -1.03
MSH5-201ENST00000375703 PRKDCP78527 4128 aaKnown RBP8.59□□□□□ -1.03
MSH5-201ENST00000375703 KMT2AQ03164 3969 aa8.59□□□□□ -1.03
MSH5-201ENST00000375703 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
MSH5-201ENST00000375703 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
MSH5-201ENST00000375703 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
MSH5-201ENST00000375703 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
MSH5-201ENST00000375703 DNAH17Q9UFH2 4485 aa8.57□□□□□ -1.04
MSH5-201ENST00000375703 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
MSH5-201ENST00000375703 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.04
MSH5-201ENST00000375703 LY6G6CO95867 125 aa8.52□□□□□ -1.05
MSH5-201ENST00000375703 Q5W150 140 aa8.52□□□□□ -1.05
MSH5-201ENST00000375703 FBN3Q75N90 2809 aa8.51□□□□□ -1.05
MSH5-201ENST00000375703 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
MSH5-201ENST00000375703 HRES1P13985 223 aa8.5□□□□□ -1.05
MSH5-201ENST00000375703 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
MSH5-201ENST00000375703 Q75L30 129 aa8.48□□□□□ -1.05
MSH5-201ENST00000375703 TGP01266 2768 aa8.48□□□□□ -1.05
MSH5-201ENST00000375703 KRTAP13-3Q3SY46 172 aa8.47□□□□□ -1.05
MSH5-201ENST00000375703 C8orf87E5RJ46 101 aa8.46□□□□□ -1.05
MSH5-201ENST00000375703 MEGF8Q7Z7M0 2845 aa8.46□□□□□ -1.05
MSH5-201ENST00000375703 LCA10Q71F78 164 aa8.46□□□□□ -1.06
MSH5-201ENST00000375703 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.06
MSH5-201ENST00000375703 KRTAP10-2P60368 255 aa8.45□□□□□ -1.06
MSH5-201ENST00000375703 A6NED7 52 aa8.45□□□□□ -1.06
MSH5-201ENST00000375703 LINC00313P59037 77 aa8.43□□□□□ -1.06
MSH5-201ENST00000375703 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
MSH5-201ENST00000375703 ATP11AUNQ6ZP68 121 aa8.42□□□□□ -1.06
MSH5-201ENST00000375703 A6NN06 94 aa8.41□□□□□ -1.06
MSH5-201ENST00000375703 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
MSH5-201ENST00000375703 DNAH6Q9C0G6 4158 aa8.39□□□□□ -1.07
MSH5-201ENST00000375703 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
MSH5-201ENST00000375703 ACYP2P14621 99 aa8.38□□□□□ -1.07
MSH5-201ENST00000375703 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
MSH5-201ENST00000375703 RETNLBQ9BQ08 111 aa8.37□□□□□ -1.07
MSH5-201ENST00000375703 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
MSH5-201ENST00000375703 H3BS24 57 aa8.36□□□□□ -1.07
MSH5-201ENST00000375703 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
MSH5-201ENST00000375703 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
MSH5-201ENST00000375703 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
MSH5-201ENST00000375703 Q6ZSA8 131 aa8.34□□□□□ -1.07
MSH5-201ENST00000375703 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
MSH5-201ENST00000375703 SPINK7P58062 85 aa8.31□□□□□ -1.08
MSH5-201ENST00000375703 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
MSH5-201ENST00000375703 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
MSH5-201ENST00000375703 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
MSH5-201ENST00000375703 KRTAP1-4P0C5Y4 121 aa8.28□□□□□ -1.08
MSH5-201ENST00000375703 LRP1BQ9NZR2 4599 aa8.27□□□□□ -1.08
MSH5-201ENST00000375703 PRAC1Q96KF2 57 aa8.26□□□□□ -1.09
MSH5-201ENST00000375703 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
MSH5-201ENST00000375703 PKD1P98161 4303 aa8.23□□□□□ -1.09
MSH5-201ENST00000375703 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
MSH5-201ENST00000375703 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
MSH5-201ENST00000375703 IGKV2D-30A0A075B6S6 120 aa8.2□□□□□ -1.1
MSH5-201ENST00000375703 SPINK1P00995 79 aa8.18□□□□□ -1.1
MSH5-201ENST00000375703 FAT2Q9NYQ8 4349 aa8.18□□□□□ -1.1
MSH5-201ENST00000375703 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
MSH5-201ENST00000375703 VPS13BQ7Z7G8 4022 aa8.17□□□□□ -1.1
MSH5-201ENST00000375703 A0A1B0GU69 56 aa8.16□□□□□ -1.1
MSH5-201ENST00000375703 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.1
MSH5-201ENST00000375703 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
MSH5-201ENST00000375703 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
MSH5-201ENST00000375703 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
MSH5-201ENST00000375703 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
MSH5-201ENST00000375703 UQCR11O14957 56 aa8.01□□□□□ -1.13
MSH5-201ENST00000375703 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
MSH5-201ENST00000375703 Q8N1X5 172 aa8.01□□□□□ -1.13
MSH5-201ENST00000375703 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
MSH5-201ENST00000375703 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
MSH5-201ENST00000375703 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
MSH5-201ENST00000375703 SACSQ9NZJ4 4579 aa7.92□□□□□ -1.14
MSH5-201ENST00000375703 A8MUU9 505 aa7.91□□□□□ -1.14
MSH5-201ENST00000375703 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
MSH5-201ENST00000375703 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
MSH5-201ENST00000375703 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
MSH5-201ENST00000375703 DYNC1H1Q14204 4646 aaKnown RBP7.85□□□□□ -1.15
MSH5-201ENST00000375703 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
MSH5-201ENST00000375703 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
MSH5-201ENST00000375703 KRTAP21-3Q3LHN1 58 aa7.81□□□□□ -1.16
MSH5-201ENST00000375703 FAT1Q14517 4588 aa7.8□□□□□ -1.16
MSH5-201ENST00000375703 PKHD1L1Q86WI1 4243 aa7.8□□□□□ -1.16
MSH5-201ENST00000375703 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.17
MSH5-201ENST00000375703 H0YAA0 97 aa7.71□□□□□ -1.18
MSH5-201ENST00000375703 A0A1B0GU33 70 aa7.71□□□□□ -1.18
MSH5-201ENST00000375703 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
MSH5-201ENST00000375703 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
MSH5-201ENST00000375703 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
MSH5-201ENST00000375703 ROMO1P60602 79 aa7.59□□□□□ -1.19
MSH5-201ENST00000375703 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
MSH5-201ENST00000375703 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
MSH5-201ENST00000375703 RYR2Q92736 4967 aa7.55□□□□□ -1.2
MSH5-201ENST00000375703 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.21
MSH5-201ENST00000375703 TNXBP22105 4242 aa7.52□□□□□ -1.21
MSH5-201ENST00000375703 Q5VSD8 79 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms