RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 COA5Q86WW8 74 aa10.2□□□□□ -0.78
PHF1-202ENST00000374516 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
PHF1-202ENST00000374516 PKD1P98161 4303 aa10.16□□□□□ -0.78
PHF1-202ENST00000374516 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
PHF1-202ENST00000374516 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.79
PHF1-202ENST00000374516 PCOTHQ58A44 107 aa10.15□□□□□ -0.79
PHF1-202ENST00000374516 Q96NJ1 140 aa10.15□□□□□ -0.79
PHF1-202ENST00000374516 TP53AIP1Q9HCN2 124 aa10.15□□□□□ -0.79
PHF1-202ENST00000374516 Q75L30 129 aa10.14□□□□□ -0.79
PHF1-202ENST00000374516 IGLV9-49A0A0B4J1Y8 123 aa10.13□□□□□ -0.79
PHF1-202ENST00000374516 CD164Q04900 197 aa10.12□□□□□ -0.79
PHF1-202ENST00000374516 LCA10Q71F78 164 aa10.12□□□□□ -0.79
PHF1-202ENST00000374516 CIRBP-AS1Q8TBR5 109 aa10.11□□□□□ -0.79
PHF1-202ENST00000374516 ANAPC11Q9NYG5 84 aa10.11□□□□□ -0.79
PHF1-202ENST00000374516 ZNF861PO60384 105 aa10.1□□□□□ -0.79
PHF1-202ENST00000374516 MOBPQ13875 183 aa10.1□□□□□ -0.79
PHF1-202ENST00000374516 A6NED7 52 aa10.09□□□□□ -0.79
PHF1-202ENST00000374516 C8orf17Q9NRJ1 99 aa10.09□□□□□ -0.79
PHF1-202ENST00000374516 SACSQ9NZJ4 4579 aa10.07□□□□□ -0.8
PHF1-202ENST00000374516 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
PHF1-202ENST00000374516 SPTSSBQ8NFR3 76 aa10.07□□□□□ -0.8
PHF1-202ENST00000374516 ATP11AUNQ6ZP68 121 aa10.07□□□□□ -0.8
PHF1-202ENST00000374516 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
PHF1-202ENST00000374516 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
PHF1-202ENST00000374516 IGLV7-43P04211 117 aa10.05□□□□□ -0.8
PHF1-202ENST00000374516 SPAG11AQ6PDA7 123 aa10.05□□□□□ -0.8
PHF1-202ENST00000374516 ZNF706Q9Y5V0 76 aaPredicted RBP10.04□□□□□ -0.8
PHF1-202ENST00000374516 LINC01558Q9Y6Z2 57 aa10.04□□□□□ -0.8
PHF1-202ENST00000374516 IGHV6-1A0A0B4J1U7 121 aa10.04□□□□□ -0.8
PHF1-202ENST00000374516 NDUFS5O43920 106 aa10.04□□□□□ -0.8
PHF1-202ENST00000374516 A0A1B0GVX0 72 aa10.02□□□□□ -0.8
PHF1-202ENST00000374516 PKHD1P08F94 4074 aa10.02□□□□□ -0.81
PHF1-202ENST00000374516 CDC42SE1Q9NRR8 79 aa10.01□□□□□ -0.81
PHF1-202ENST00000374516 Q6ZSA8 131 aa10□□□□□ -0.81
PHF1-202ENST00000374516 KTN1-AS1Q86SY8 53 aa10□□□□□ -0.81
PHF1-202ENST00000374516 HRES1P13985 223 aa10□□□□□ -0.81
PHF1-202ENST00000374516 MRPL34Q9BQ48 92 aaKnown RBP9.99□□□□□ -0.81
PHF1-202ENST00000374516 CDK2AP2O75956 126 aa9.98□□□□□ -0.81
PHF1-202ENST00000374516 A0A087X002 238 aa9.96□□□□□ -0.81
PHF1-202ENST00000374516 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.81
PHF1-202ENST00000374516 A6NN06 94 aa9.95□□□□□ -0.82
PHF1-202ENST00000374516 VPS13BQ7Z7G8 4022 aa9.93□□□□□ -0.82
PHF1-202ENST00000374516 SPINK7P58062 85 aa9.9□□□□□ -0.82
PHF1-202ENST00000374516 KMT2CQ8NEZ4 4911 aaKnown RBP9.88□□□□□ -0.83
PHF1-202ENST00000374516 Q5W150 140 aa9.87□□□□□ -0.83
PHF1-202ENST00000374516 RBM12B-AS1Q9P1G2 102 aa9.86□□□□□ -0.83
PHF1-202ENST00000374516 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
PHF1-202ENST00000374516 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
PHF1-202ENST00000374516 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
PHF1-202ENST00000374516 RYR2Q92736 4967 aa9.83□□□□□ -0.84
PHF1-202ENST00000374516 SPINK6Q6UWN8 80 aa9.82□□□□□ -0.84
PHF1-202ENST00000374516 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
PHF1-202ENST00000374516 ACYP2P14621 99 aa9.78□□□□□ -0.84
PHF1-202ENST00000374516 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
PHF1-202ENST00000374516 SSBP3-AS1Q7Z2R9 100 aa9.77□□□□□ -0.85
PHF1-202ENST00000374516 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
PHF1-202ENST00000374516 A0A1B0GVY2 172 aa9.74□□□□□ -0.85
PHF1-202ENST00000374516 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
PHF1-202ENST00000374516 FAT1Q14517 4588 aa9.72□□□□□ -0.85
PHF1-202ENST00000374516 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
PHF1-202ENST00000374516 C8orf87E5RJ46 101 aa9.7□□□□□ -0.86
PHF1-202ENST00000374516 DMAC1Q96GE9 116 aa9.7□□□□□ -0.86
PHF1-202ENST00000374516 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
PHF1-202ENST00000374516 LINC00313P59037 77 aa9.64□□□□□ -0.87
PHF1-202ENST00000374516 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
PHF1-202ENST00000374516 TYMSOSQ8TAI1 123 aa9.61□□□□□ -0.87
PHF1-202ENST00000374516 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
PHF1-202ENST00000374516 A0A1B0GU69 56 aa9.61□□□□□ -0.87
PHF1-202ENST00000374516 RYR3Q15413 4870 aa9.6□□□□□ -0.87
PHF1-202ENST00000374516 IGKV2-30P06310 120 aa9.59□□□□□ -0.87
PHF1-202ENST00000374516 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
PHF1-202ENST00000374516 SPATA8Q6RVD6 105 aa9.55□□□□□ -0.88
PHF1-202ENST00000374516 KRTAP10-4P60372 401 aaPredicted RBP9.53□□□□□ -0.88
PHF1-202ENST00000374516 PRAC1Q96KF2 57 aa9.52□□□□□ -0.89
PHF1-202ENST00000374516 KRTAP16-1A8MUX0 517 aa9.49□□□□□ -0.89
PHF1-202ENST00000374516 SPINK1P00995 79 aa9.49□□□□□ -0.89
PHF1-202ENST00000374516 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
PHF1-202ENST00000374516 UQCR11O14957 56 aa9.48□□□□□ -0.89
PHF1-202ENST00000374516 MIR22HGQ0VDD5 57 aa9.48□□□□□ -0.89
PHF1-202ENST00000374516 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
PHF1-202ENST00000374516 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
PHF1-202ENST00000374516 HSPG2P98160 4391 aa9.39□□□□□ -0.91
PHF1-202ENST00000374516 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
PHF1-202ENST00000374516 LRP1Q07954 4544 aaKnown RBP9.36□□□□□ -0.91
PHF1-202ENST00000374516 RPS29P62273 56 aaKnown RBP9.33□□□□□ -0.92
PHF1-202ENST00000374516 RYR1P21817 5038 aa9.32□□□□□ -0.92
PHF1-202ENST00000374516 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
PHF1-202ENST00000374516 Q5VSD8 79 aa9.31□□□□□ -0.92
PHF1-202ENST00000374516 KIAA1109Q2LD37 5005 aa9.3□□□□□ -0.92
PHF1-202ENST00000374516 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
PHF1-202ENST00000374516 EPPK1P58107 5090 aaKnown RBP9.26□□□□□ -0.93
PHF1-202ENST00000374516 Q8N1X5 172 aa9.24□□□□□ -0.93
PHF1-202ENST00000374516 FLG2Q5D862 2391 aaPredicted RBP9.24□□□□□ -0.93
PHF1-202ENST00000374516 TNXBP22105 4242 aa9.23□□□□□ -0.93
PHF1-202ENST00000374516 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
PHF1-202ENST00000374516 CSAG1Q6PB30 78 aa9.21□□□□□ -0.93
PHF1-202ENST00000374516 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
PHF1-202ENST00000374516 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
PHF1-202ENST00000374516 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
PHF1-202ENST00000374516 FAT3Q8TDW7 4589 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms