RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 A0A1B0GVX0 72 aa7.27□□□□□ -1.25
PRPF4-202ENST00000374199 NDUFC1O43677 76 aa7.27□□□□□ -1.25
PRPF4-202ENST00000374199 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
PRPF4-202ENST00000374199 FAT1Q14517 4588 aa7.26□□□□□ -1.25
PRPF4-202ENST00000374199 SMIM26A0A096LP01 95 aa7.25□□□□□ -1.25
PRPF4-202ENST00000374199 CASC2Q6XLA1 102 aa7.24□□□□□ -1.25
PRPF4-202ENST00000374199 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
PRPF4-202ENST00000374199 TNXBP22105 4242 aa7.23□□□□□ -1.25
PRPF4-202ENST00000374199 NDUFB1O75438 58 aa7.21□□□□□ -1.26
PRPF4-202ENST00000374199 MPLKIPQ8TAP9 179 aa7.21□□□□□ -1.26
PRPF4-202ENST00000374199 hDV103S1A0JD37 113 aa7.2□□□□□ -1.26
PRPF4-202ENST00000374199 H3BPC8 53 aa7.2□□□□□ -1.26
PRPF4-202ENST00000374199 PRO0628Q9UI54 55 aa7.2□□□□□ -1.26
PRPF4-202ENST00000374199 RYR1P21817 5038 aa7.2□□□□□ -1.26
PRPF4-202ENST00000374199 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
PRPF4-202ENST00000374199 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
PRPF4-202ENST00000374199 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
PRPF4-202ENST00000374199 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
PRPF4-202ENST00000374199 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
PRPF4-202ENST00000374199 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
PRPF4-202ENST00000374199 PLA2G1BP04054 148 aaKnown RBP7.17□□□□□ -1.26
PRPF4-202ENST00000374199 C8orf87E5RJ46 101 aa7.16□□□□□ -1.26
PRPF4-202ENST00000374199 SPINK1P00995 79 aa7.16□□□□□ -1.26
PRPF4-202ENST00000374199 ATP5EP56381 51 aaPredicted RBP7.16□□□□□ -1.26
PRPF4-202ENST00000374199 KRTAP16-1A8MUX0 517 aa7.15□□□□□ -1.26
PRPF4-202ENST00000374199 LIMD2Q9BT23 127 aa7.15□□□□□ -1.26
PRPF4-202ENST00000374199 CDK2AP2O75956 126 aa7.15□□□□□ -1.27
PRPF4-202ENST00000374199 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
PRPF4-202ENST00000374199 Q8N9P0 234 aaPredicted RBP7.12□□□□□ -1.27
PRPF4-202ENST00000374199 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
PRPF4-202ENST00000374199 SPAG11AQ6PDA7 123 aa7.12□□□□□ -1.27
PRPF4-202ENST00000374199 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
PRPF4-202ENST00000374199 IGHV6-1A0A0B4J1U7 121 aa7.12□□□□□ -1.27
PRPF4-202ENST00000374199 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
PRPF4-202ENST00000374199 SMR3BP02814 79 aaPredicted RBP7.09□□□□□ -1.27
PRPF4-202ENST00000374199 PRR26Q8N8Z3 221 aa7.08□□□□□ -1.28
PRPF4-202ENST00000374199 H0Y9P7 68 aa7.08□□□□□ -1.28
PRPF4-202ENST00000374199 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
PRPF4-202ENST00000374199 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
PRPF4-202ENST00000374199 MP68P56378 58 aa7.07□□□□□ -1.28
PRPF4-202ENST00000374199 PRR4Q16378 134 aa7.07□□□□□ -1.28
PRPF4-202ENST00000374199 LINC00304Q8N9R0 145 aa7.07□□□□□ -1.28
PRPF4-202ENST00000374199 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
PRPF4-202ENST00000374199 LINC00313P59037 77 aa7.03□□□□□ -1.28
PRPF4-202ENST00000374199 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
PRPF4-202ENST00000374199 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
PRPF4-202ENST00000374199 C1orf64Q8NEQ6 169 aa7.03□□□□□ -1.28
PRPF4-202ENST00000374199 Q5W150 140 aa7.01□□□□□ -1.29
PRPF4-202ENST00000374199 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
PRPF4-202ENST00000374199 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
PRPF4-202ENST00000374199 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
PRPF4-202ENST00000374199 PSPHP1O15172 72 aa6.99□□□□□ -1.29
PRPF4-202ENST00000374199 IGLV7-46A0A075B6I9 117 aa6.97□□□□□ -1.29
PRPF4-202ENST00000374199 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
PRPF4-202ENST00000374199 Q5VSD8 79 aa6.97□□□□□ -1.29
PRPF4-202ENST00000374199 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.29
PRPF4-202ENST00000374199 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
PRPF4-202ENST00000374199 Q1T7F1 81 aa6.92□□□□□ -1.3
PRPF4-202ENST00000374199 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
PRPF4-202ENST00000374199 V9GYY9 64 aa6.91□□□□□ -1.3
PRPF4-202ENST00000374199 A8MUU9 505 aa6.91□□□□□ -1.3
PRPF4-202ENST00000374199 Q8N1X5 172 aa6.91□□□□□ -1.3
PRPF4-202ENST00000374199 NDUFS5O43920 106 aa6.9□□□□□ -1.31
PRPF4-202ENST00000374199 IGKV2-30P06310 120 aa6.9□□□□□ -1.31
PRPF4-202ENST00000374199 A8MUN3 132 aa6.89□□□□□ -1.31
PRPF4-202ENST00000374199 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
PRPF4-202ENST00000374199 FLG2Q5D862 2391 aaPredicted RBP6.88□□□□□ -1.31
PRPF4-202ENST00000374199 A8MU10 97 aa6.87□□□□□ -1.31
PRPF4-202ENST00000374199 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
PRPF4-202ENST00000374199 SEC61GP60059 68 aa6.84□□□□□ -1.32
PRPF4-202ENST00000374199 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
PRPF4-202ENST00000374199 Q75L30 129 aa6.8□□□□□ -1.32
PRPF4-202ENST00000374199 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
PRPF4-202ENST00000374199 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
PRPF4-202ENST00000374199 Q5VV11 94 aa6.8□□□□□ -1.32
PRPF4-202ENST00000374199 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
PRPF4-202ENST00000374199 HRES1P13985 223 aa6.78□□□□□ -1.32
PRPF4-202ENST00000374199 PRR15LQ9BU68 103 aa6.77□□□□□ -1.33
PRPF4-202ENST00000374199 COA5Q86WW8 74 aa6.75□□□□□ -1.33
PRPF4-202ENST00000374199 HERC2O95714 4834 aa6.74□□□□□ -1.33
PRPF4-202ENST00000374199 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
PRPF4-202ENST00000374199 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
PRPF4-202ENST00000374199 C7orf65Q6ZTY9 151 aa6.71□□□□□ -1.34
PRPF4-202ENST00000374199 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
PRPF4-202ENST00000374199 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.34
PRPF4-202ENST00000374199 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
PRPF4-202ENST00000374199 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
PRPF4-202ENST00000374199 A6NED7 52 aa6.69□□□□□ -1.34
PRPF4-202ENST00000374199 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
PRPF4-202ENST00000374199 LCA10Q71F78 164 aa6.68□□□□□ -1.34
PRPF4-202ENST00000374199 ACYP2P14621 99 aa6.67□□□□□ -1.34
PRPF4-202ENST00000374199 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
PRPF4-202ENST00000374199 XP32Q5T750 250 aa6.66□□□□□ -1.34
PRPF4-202ENST00000374199 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
PRPF4-202ENST00000374199 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
PRPF4-202ENST00000374199 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
PRPF4-202ENST00000374199 ATP11AUNQ6ZP68 121 aa6.59□□□□□ -1.35
PRPF4-202ENST00000374199 SPINK7P58062 85 aa6.58□□□□□ -1.36
PRPF4-202ENST00000374199 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
PRPF4-202ENST00000374199 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms