RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 UBL5Q9BZL1 73 aa8.79□□□□□ -1
HDHD3-202ENST00000374180 Q6ZQT0 140 aa8.78□□□□□ -1
HDHD3-202ENST00000374180 ATOX1O00244 68 aa8.77□□□□□ -1
HDHD3-202ENST00000374180 XP32Q5T750 250 aa8.77□□□□□ -1
HDHD3-202ENST00000374180 IGKV3D-7A0A0C4DH55 119 aa8.76□□□□□ -1.01
HDHD3-202ENST00000374180 CCDC179H3BU77 68 aa8.76□□□□□ -1.01
HDHD3-202ENST00000374180 HIST1H4AP62805 103 aaKnown RBP8.76□□□□□ -1.01
HDHD3-202ENST00000374180 MUC2Q02817 5179 aa8.74□□□□□ -1.01
HDHD3-202ENST00000374180 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
HDHD3-202ENST00000374180 UQCRQO14949 82 aa8.72□□□□□ -1.01
HDHD3-202ENST00000374180 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
HDHD3-202ENST00000374180 A0A1B0GW54 56 aa8.71□□□□□ -1.01
HDHD3-202ENST00000374180 Q96NJ1 140 aa8.7□□□□□ -1.02
HDHD3-202ENST00000374180 COX7CP15954 63 aa8.69□□□□□ -1.02
HDHD3-202ENST00000374180 CXCL6P80162 114 aa8.65□□□□□ -1.02
HDHD3-202ENST00000374180 Q6ZVQ6 151 aa8.65□□□□□ -1.02
HDHD3-202ENST00000374180 IGKV4-1P06312 121 aa8.64□□□□□ -1.03
HDHD3-202ENST00000374180 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
HDHD3-202ENST00000374180 LINC00472Q9H8W2 130 aa8.64□□□□□ -1.03
HDHD3-202ENST00000374180 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
HDHD3-202ENST00000374180 A0A087WVE0 104 aa8.62□□□□□ -1.03
HDHD3-202ENST00000374180 RPL37P61927 97 aaKnown RBP8.6□□□□□ -1.03
HDHD3-202ENST00000374180 PCOTHQ58A44 107 aa8.6□□□□□ -1.03
HDHD3-202ENST00000374180 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
HDHD3-202ENST00000374180 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
HDHD3-202ENST00000374180 KRTAP4-1Q9BYQ7 146 aa8.57□□□□□ -1.04
HDHD3-202ENST00000374180 DSCR10P59022 87 aa8.56□□□□□ -1.04
HDHD3-202ENST00000374180 J3KT08 172 aa8.55□□□□□ -1.04
HDHD3-202ENST00000374180 LINC00313P59037 77 aa8.55□□□□□ -1.04
HDHD3-202ENST00000374180 NREPQ16612 68 aa8.54□□□□□ -1.04
HDHD3-202ENST00000374180 Q75L30 129 aa8.54□□□□□ -1.04
HDHD3-202ENST00000374180 IGHV6-1A0A0B4J1U7 121 aa8.53□□□□□ -1.04
HDHD3-202ENST00000374180 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
HDHD3-202ENST00000374180 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
HDHD3-202ENST00000374180 A0A1B0GVX0 72 aa8.5□□□□□ -1.05
HDHD3-202ENST00000374180 C20orf166-AS1Q96NR2 134 aa8.5□□□□□ -1.05
HDHD3-202ENST00000374180 A8MUU9 505 aa8.49□□□□□ -1.05
HDHD3-202ENST00000374180 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
HDHD3-202ENST00000374180 BPY2O14599 106 aa8.48□□□□□ -1.05
HDHD3-202ENST00000374180 NDUFB1O75438 58 aa8.48□□□□□ -1.05
HDHD3-202ENST00000374180 TMEM258P61165 79 aa8.48□□□□□ -1.05
HDHD3-202ENST00000374180 C8orf87E5RJ46 101 aa8.46□□□□□ -1.05
HDHD3-202ENST00000374180 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
HDHD3-202ENST00000374180 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
HDHD3-202ENST00000374180 A8MWP4 228 aa8.45□□□□□ -1.06
HDHD3-202ENST00000374180 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
HDHD3-202ENST00000374180 C20orf197Q8N268 126 aa8.4□□□□□ -1.06
HDHD3-202ENST00000374180 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
HDHD3-202ENST00000374180 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
HDHD3-202ENST00000374180 NDUFC1O43677 76 aa8.37□□□□□ -1.07
HDHD3-202ENST00000374180 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
HDHD3-202ENST00000374180 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
HDHD3-202ENST00000374180 K7EQZ3 153 aa8.33□□□□□ -1.08
HDHD3-202ENST00000374180 Q8N9L7 120 aa8.33□□□□□ -1.08
HDHD3-202ENST00000374180 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
HDHD3-202ENST00000374180 Q8N9P0 234 aaPredicted RBP8.31□□□□□ -1.08
HDHD3-202ENST00000374180 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
HDHD3-202ENST00000374180 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
HDHD3-202ENST00000374180 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
HDHD3-202ENST00000374180 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
HDHD3-202ENST00000374180 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
HDHD3-202ENST00000374180 H7BZZ5 65 aa8.28□□□□□ -1.08
HDHD3-202ENST00000374180 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
HDHD3-202ENST00000374180 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
HDHD3-202ENST00000374180 TMEM254Q8TBM7 123 aa8.27□□□□□ -1.09
HDHD3-202ENST00000374180 hDV103S1A0JD37 113 aa8.26□□□□□ -1.09
HDHD3-202ENST00000374180 ZCCHC13Q8WW36 166 aaKnown RBP8.26□□□□□ -1.09
HDHD3-202ENST00000374180 SNURFQ9Y675 71 aa8.26□□□□□ -1.09
HDHD3-202ENST00000374180 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
HDHD3-202ENST00000374180 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
HDHD3-202ENST00000374180 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
HDHD3-202ENST00000374180 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
HDHD3-202ENST00000374180 NDUFS5O43920 106 aa8.2□□□□□ -1.1
HDHD3-202ENST00000374180 C5orf47Q569G3 176 aa8.19□□□□□ -1.1
HDHD3-202ENST00000374180 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
HDHD3-202ENST00000374180 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
HDHD3-202ENST00000374180 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
HDHD3-202ENST00000374180 MT1HP80294 61 aa8.17□□□□□ -1.1
HDHD3-202ENST00000374180 SPINK7P58062 85 aa8.14□□□□□ -1.11
HDHD3-202ENST00000374180 HRES1P13985 223 aa8.13□□□□□ -1.11
HDHD3-202ENST00000374180 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
HDHD3-202ENST00000374180 MP68P56378 58 aa8.11□□□□□ -1.11
HDHD3-202ENST00000374180 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
HDHD3-202ENST00000374180 H3BPC8 53 aa8.1□□□□□ -1.11
HDHD3-202ENST00000374180 M0R2T5 61 aa8.1□□□□□ -1.11
HDHD3-202ENST00000374180 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
HDHD3-202ENST00000374180 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
HDHD3-202ENST00000374180 Q5W150 140 aa8.06□□□□□ -1.12
HDHD3-202ENST00000374180 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
HDHD3-202ENST00000374180 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
HDHD3-202ENST00000374180 H0Y9P7 68 aa8□□□□□ -1.13
HDHD3-202ENST00000374180 IGKV2-30P06310 120 aa8□□□□□ -1.13
HDHD3-202ENST00000374180 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
HDHD3-202ENST00000374180 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
HDHD3-202ENST00000374180 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
HDHD3-202ENST00000374180 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
HDHD3-202ENST00000374180 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
HDHD3-202ENST00000374180 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
HDHD3-202ENST00000374180 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
HDHD3-202ENST00000374180 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms