RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 PRR4Q16378 134 aa8□□□□□ -1.13
A1CF-204ENST00000373997 RYR2Q92736 4967 aa7.98□□□□□ -1.13
A1CF-204ENST00000373997 MMP24-AS1A0A0U1RRL7 71 aa7.98□□□□□ -1.13
A1CF-204ENST00000373997 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
A1CF-204ENST00000373997 PKHD1P08F94 4074 aa7.97□□□□□ -1.13
A1CF-204ENST00000373997 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
A1CF-204ENST00000373997 ZNF861PO60384 105 aa7.96□□□□□ -1.13
A1CF-204ENST00000373997 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
A1CF-204ENST00000373997 MOBPQ13875 183 aa7.94□□□□□ -1.14
A1CF-204ENST00000373997 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
A1CF-204ENST00000373997 ASB16-AS1Q495Z4 193 aa7.93□□□□□ -1.14
A1CF-204ENST00000373997 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
A1CF-204ENST00000373997 Q96NJ1 140 aa7.92□□□□□ -1.14
A1CF-204ENST00000373997 ZNF706Q9Y5V0 76 aaPredicted RBP7.92□□□□□ -1.14
A1CF-204ENST00000373997 IGLV9-49A0A0B4J1Y8 123 aa7.9□□□□□ -1.14
A1CF-204ENST00000373997 PSPHP1O15172 72 aa7.9□□□□□ -1.14
A1CF-204ENST00000373997 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
A1CF-204ENST00000373997 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
A1CF-204ENST00000373997 J3QL48 77 aa7.89□□□□□ -1.15
A1CF-204ENST00000373997 LRP1BQ9NZR2 4599 aa7.88□□□□□ -1.15
A1CF-204ENST00000373997 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
A1CF-204ENST00000373997 LIMD2Q9BT23 127 aa7.88□□□□□ -1.15
A1CF-204ENST00000373997 DYNC1H1Q14204 4646 aaKnown RBP7.87□□□□□ -1.15
A1CF-204ENST00000373997 A8MUN3 132 aa7.86□□□□□ -1.15
A1CF-204ENST00000373997 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
A1CF-204ENST00000373997 A0A1B0GVX0 72 aa7.85□□□□□ -1.15
A1CF-204ENST00000373997 CDK2AP2O75956 126 aa7.84□□□□□ -1.16
A1CF-204ENST00000373997 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.16
A1CF-204ENST00000373997 Q5VV11 94 aa7.84□□□□□ -1.16
A1CF-204ENST00000373997 COA5Q86WW8 74 aa7.83□□□□□ -1.16
A1CF-204ENST00000373997 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
A1CF-204ENST00000373997 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
A1CF-204ENST00000373997 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
A1CF-204ENST00000373997 RYR3Q15413 4870 aa7.79□□□□□ -1.16
A1CF-204ENST00000373997 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
A1CF-204ENST00000373997 NDUFS5O43920 106 aa7.78□□□□□ -1.16
A1CF-204ENST00000373997 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.17
A1CF-204ENST00000373997 LOC101927531A0A1B0GV80 90 aa7.77□□□□□ -1.17
A1CF-204ENST00000373997 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
A1CF-204ENST00000373997 CHKB-CPT1BH3BT56 60 aa7.76□□□□□ -1.17
A1CF-204ENST00000373997 Q75L30 129 aa7.75□□□□□ -1.17
A1CF-204ENST00000373997 A0A087X002 238 aa7.75□□□□□ -1.17
A1CF-204ENST00000373997 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
A1CF-204ENST00000373997 C8orf87E5RJ46 101 aa7.72□□□□□ -1.17
A1CF-204ENST00000373997 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
A1CF-204ENST00000373997 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
A1CF-204ENST00000373997 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
A1CF-204ENST00000373997 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
A1CF-204ENST00000373997 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
A1CF-204ENST00000373997 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
A1CF-204ENST00000373997 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
A1CF-204ENST00000373997 SSBP3-AS1Q7Z2R9 100 aa7.68□□□□□ -1.18
A1CF-204ENST00000373997 HRES1P13985 223 aa7.67□□□□□ -1.18
A1CF-204ENST00000373997 KRTAP13-3Q3SY46 172 aa7.66□□□□□ -1.18
A1CF-204ENST00000373997 FAT1Q14517 4588 aa7.66□□□□□ -1.18
A1CF-204ENST00000373997 A6NED7 52 aa7.66□□□□□ -1.18
A1CF-204ENST00000373997 A8MU10 97 aa7.64□□□□□ -1.19
A1CF-204ENST00000373997 SPAG11AQ6PDA7 123 aa7.64□□□□□ -1.19
A1CF-204ENST00000373997 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
A1CF-204ENST00000373997 Q5W150 140 aa7.63□□□□□ -1.19
A1CF-204ENST00000373997 LCA10Q71F78 164 aa7.63□□□□□ -1.19
A1CF-204ENST00000373997 TYMSOSQ8TAI1 123 aa7.63□□□□□ -1.19
A1CF-204ENST00000373997 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
A1CF-204ENST00000373997 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
A1CF-204ENST00000373997 Q5VSD8 79 aa7.6□□□□□ -1.19
A1CF-204ENST00000373997 HSPG2P98160 4391 aa7.58□□□□□ -1.2
A1CF-204ENST00000373997 ACYP2P14621 99 aa7.58□□□□□ -1.2
A1CF-204ENST00000373997 LINC00313P59037 77 aa7.56□□□□□ -1.2
A1CF-204ENST00000373997 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
A1CF-204ENST00000373997 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
A1CF-204ENST00000373997 KTN1-AS1Q86SY8 53 aa7.54□□□□□ -1.2
A1CF-204ENST00000373997 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
A1CF-204ENST00000373997 LINC00304Q8N9R0 145 aa7.53□□□□□ -1.2
A1CF-204ENST00000373997 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.2
A1CF-204ENST00000373997 RYR1P21817 5038 aa7.52□□□□□ -1.21
A1CF-204ENST00000373997 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
A1CF-204ENST00000373997 A6NN06 94 aa7.51□□□□□ -1.21
A1CF-204ENST00000373997 SPINK7P58062 85 aa7.51□□□□□ -1.21
A1CF-204ENST00000373997 SPINK1P00995 79 aa7.49□□□□□ -1.21
A1CF-204ENST00000373997 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
A1CF-204ENST00000373997 KIAA1109Q2LD37 5005 aa7.47□□□□□ -1.21
A1CF-204ENST00000373997 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
A1CF-204ENST00000373997 Q8N1X5 172 aa7.45□□□□□ -1.22
A1CF-204ENST00000373997 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
A1CF-204ENST00000373997 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
A1CF-204ENST00000373997 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
A1CF-204ENST00000373997 LRP1Q07954 4544 aaKnown RBP7.41□□□□□ -1.22
A1CF-204ENST00000373997 C7orf65Q6ZTY9 151 aa7.39□□□□□ -1.23
A1CF-204ENST00000373997 A0A1B0GU69 56 aa7.39□□□□□ -1.23
A1CF-204ENST00000373997 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
A1CF-204ENST00000373997 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
A1CF-204ENST00000373997 TNXBP22105 4242 aa7.35□□□□□ -1.23
A1CF-204ENST00000373997 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
A1CF-204ENST00000373997 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
A1CF-204ENST00000373997 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
A1CF-204ENST00000373997 KRTAP4-5Q9BYR2 181 aa7.31□□□□□ -1.24
A1CF-204ENST00000373997 MYCBP2O75592 4640 aa7.29□□□□□ -1.24
A1CF-204ENST00000373997 UQCR11O14957 56 aa7.28□□□□□ -1.24
A1CF-204ENST00000373997 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
A1CF-204ENST00000373997 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms