RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 LYRM7Q5U5X0 104 aa10.15□□□□□ -0.78
CHPF-202ENST00000373891 SIGMAR1Q99720 223 aa10.15□□□□□ -0.78
CHPF-202ENST00000373891 VPS25Q9BRG1 176 aa10.12□□□□□ -0.79
CHPF-202ENST00000373891 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
CHPF-202ENST00000373891 IGKV4-1P06312 121 aa10.11□□□□□ -0.79
CHPF-202ENST00000373891 KRTAP10-10P60014 251 aa10.11□□□□□ -0.79
CHPF-202ENST00000373891 C21orf62-AS1Q17RA5 79 aa10.11□□□□□ -0.79
CHPF-202ENST00000373891 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
CHPF-202ENST00000373891 C9JAW5 83 aa10.1□□□□□ -0.79
CHPF-202ENST00000373891 KRTAP9-3Q9BYQ3 159 aa10.1□□□□□ -0.79
CHPF-202ENST00000373891 BATFQ16520 125 aa10.09□□□□□ -0.79
CHPF-202ENST00000373891 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
CHPF-202ENST00000373891 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
CHPF-202ENST00000373891 MACF1Q9UPN3 7388 aaKnown RBP10.07□□□□□ -0.8
CHPF-202ENST00000373891 LINC00472Q9H8W2 130 aa10.06□□□□□ -0.8
CHPF-202ENST00000373891 LINC00313P59037 77 aa10.05□□□□□ -0.8
CHPF-202ENST00000373891 SYNE2Q8WXH0 6885 aaKnown RBP10.05□□□□□ -0.8
CHPF-202ENST00000373891 HRES1P13985 223 aa10.02□□□□□ -0.81
CHPF-202ENST00000373891 PDE6GP18545 87 aa10.02□□□□□ -0.81
CHPF-202ENST00000373891 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
CHPF-202ENST00000373891 RBM12B-AS1Q9P1G2 102 aa10.02□□□□□ -0.81
CHPF-202ENST00000373891 A0A1B0GW54 56 aa10□□□□□ -0.81
CHPF-202ENST00000373891 J3KT08 172 aa9.99□□□□□ -0.81
CHPF-202ENST00000373891 MPLKIPQ8TAP9 179 aa9.99□□□□□ -0.81
CHPF-202ENST00000373891 LOC110117498A0A087WWA1 95 aa9.98□□□□□ -0.81
CHPF-202ENST00000373891 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
CHPF-202ENST00000373891 C9orf118A6NHY6 69 aa9.97□□□□□ -0.81
CHPF-202ENST00000373891 Q6ZQT0 140 aa9.97□□□□□ -0.81
CHPF-202ENST00000373891 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
CHPF-202ENST00000373891 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
CHPF-202ENST00000373891 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
CHPF-202ENST00000373891 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
CHPF-202ENST00000373891 C14orf132Q9NPU4 83 aa9.92□□□□□ -0.82
CHPF-202ENST00000373891 TAX1BP3O14907 124 aa9.91□□□□□ -0.82
CHPF-202ENST00000373891 NDUFB1O75438 58 aa9.91□□□□□ -0.82
CHPF-202ENST00000373891 H3BT86 120 aa9.9□□□□□ -0.82
CHPF-202ENST00000373891 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
CHPF-202ENST00000373891 KRTAP19-6Q3LI70 58 aa9.85□□□□□ -0.83
CHPF-202ENST00000373891 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
CHPF-202ENST00000373891 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
CHPF-202ENST00000373891 NREPQ16612 68 aa9.83□□□□□ -0.84
CHPF-202ENST00000373891 A8MWP4 228 aa9.82□□□□□ -0.84
CHPF-202ENST00000373891 MTURNQ8N3F0 131 aa9.8□□□□□ -0.84
CHPF-202ENST00000373891 SPCS1Q9Y6A9 102 aa9.8□□□□□ -0.84
CHPF-202ENST00000373891 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
CHPF-202ENST00000373891 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
CHPF-202ENST00000373891 IGKV3D-7A0A0C4DH55 119 aa9.74□□□□□ -0.85
CHPF-202ENST00000373891 SPINK7P58062 85 aa9.73□□□□□ -0.85
CHPF-202ENST00000373891 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
CHPF-202ENST00000373891 ZCCHC13Q8WW36 166 aaKnown RBP9.73□□□□□ -0.85
CHPF-202ENST00000373891 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
CHPF-202ENST00000373891 Q6ZVQ6 151 aa9.69□□□□□ -0.86
CHPF-202ENST00000373891 KRTAP6-3Q3LI67 103 aa9.67□□□□□ -0.86
CHPF-202ENST00000373891 BPY2O14599 106 aa9.66□□□□□ -0.86
CHPF-202ENST00000373891 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
CHPF-202ENST00000373891 K7EP34 96 aa9.64□□□□□ -0.87
CHPF-202ENST00000373891 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
CHPF-202ENST00000373891 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
CHPF-202ENST00000373891 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
CHPF-202ENST00000373891 hDV103S1A0JD37 113 aa9.61□□□□□ -0.87
CHPF-202ENST00000373891 K7EQZ3 153 aa9.61□□□□□ -0.87
CHPF-202ENST00000373891 GTF2H5Q6ZYL4 71 aa9.61□□□□□ -0.87
CHPF-202ENST00000373891 MRPL34Q9BQ48 92 aaKnown RBP9.61□□□□□ -0.87
CHPF-202ENST00000373891 PRO0461Q9UI25 63 aa9.59□□□□□ -0.87
CHPF-202ENST00000373891 PCP4L1A6NKN8 68 aa9.58□□□□□ -0.88
CHPF-202ENST00000373891 NDUFS5O43920 106 aa9.56□□□□□ -0.88
CHPF-202ENST00000373891 UBL5Q9BZL1 73 aa9.56□□□□□ -0.88
CHPF-202ENST00000373891 F8W1H4 67 aa9.51□□□□□ -0.89
CHPF-202ENST00000373891 CASC2Q6XLA1 102 aa9.48□□□□□ -0.89
CHPF-202ENST00000373891 Q8N9L7 120 aa9.48□□□□□ -0.89
CHPF-202ENST00000373891 NEBP20929 6669 aa9.44□□□□□ -0.9
CHPF-202ENST00000373891 ETDBQ3ZM63 59 aa9.41□□□□□ -0.9
CHPF-202ENST00000373891 H1FX-AS1Q4G0G2 97 aa9.41□□□□□ -0.9
CHPF-202ENST00000373891 HCG22E2RYF7 251 aa9.4□□□□□ -0.9
CHPF-202ENST00000373891 CXCL6P80162 114 aa9.38□□□□□ -0.91
CHPF-202ENST00000373891 C7orf65Q6ZTY9 151 aa9.37□□□□□ -0.91
CHPF-202ENST00000373891 IGKV2D-30A0A075B6S6 120 aa9.36□□□□□ -0.91
CHPF-202ENST00000373891 IGKV2-30P06310 120 aa9.36□□□□□ -0.91
CHPF-202ENST00000373891 MUC12Q9UKN1 5478 aa9.34□□□□□ -0.91
CHPF-202ENST00000373891 Q5W150 140 aa9.34□□□□□ -0.91
CHPF-202ENST00000373891 A6NN06 94 aa9.28□□□□□ -0.92
CHPF-202ENST00000373891 ACYP1P07311 99 aa9.27□□□□□ -0.93
CHPF-202ENST00000373891 TP53AIP1Q9HCN2 124 aa9.26□□□□□ -0.93
CHPF-202ENST00000373891 KRTAP20-1Q3LI63 56 aa9.23□□□□□ -0.93
CHPF-202ENST00000373891 FAM240AA0A1B0GVK7 77 aa9.21□□□□□ -0.94
CHPF-202ENST00000373891 MT1BP07438 61 aa9.2□□□□□ -0.94
CHPF-202ENST00000373891 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
CHPF-202ENST00000373891 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
CHPF-202ENST00000373891 ATP5EP2Q5VTU8 51 aa9.18□□□□□ -0.94
CHPF-202ENST00000373891 C4orf26Q17RF5 130 aa9.16□□□□□ -0.94
CHPF-202ENST00000373891 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
CHPF-202ENST00000373891 Q5VV11 94 aa9.14□□□□□ -0.95
CHPF-202ENST00000373891 HIST1H4AP62805 103 aaKnown RBP9.08□□□□□ -0.96
CHPF-202ENST00000373891 KRTAP10-5P60370 271 aa9.06□□□□□ -0.96
CHPF-202ENST00000373891 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
CHPF-202ENST00000373891 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
CHPF-202ENST00000373891 C1orf64Q8NEQ6 169 aa9.04□□□□□ -0.96
CHPF-202ENST00000373891 A0A1B0GV90 55 aa9.03□□□□□ -0.96
CHPF-202ENST00000373891 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
CHPF-202ENST00000373891 KRTAP5-9P26371 169 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms