RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 TNP1P09430 55 aa5.22□□□□□ -1.57
PTPRT-206ENST00000373198 A6NN06 94 aa5.22□□□□□ -1.57
PTPRT-206ENST00000373198 VWFP04275 2813 aa5.2□□□□□ -1.58
PTPRT-206ENST00000373198 PKD1L1Q8TDX9 2849 aa5.18□□□□□ -1.58
PTPRT-206ENST00000373198 MKI67P46013 3256 aaKnown RBP5.18□□□□□ -1.58
PTPRT-206ENST00000373198 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
PTPRT-206ENST00000373198 NOTCH2NLQ7Z3S9 236 aa5.16□□□□□ -1.58
PTPRT-206ENST00000373198 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.59
PTPRT-206ENST00000373198 ATMQ13315 3056 aa5.15□□□□□ -1.59
PTPRT-206ENST00000373198 DCHS2Q6V1P9 2916 aa5.14□□□□□ -1.59
PTPRT-206ENST00000373198 BOD1L1Q8NFC6 3051 aa5.14□□□□□ -1.59
PTPRT-206ENST00000373198 COL6A3P12111 3177 aa5.13□□□□□ -1.59
PTPRT-206ENST00000373198 TENM4Q6N022 2769 aa5.13□□□□□ -1.59
PTPRT-206ENST00000373198 CFAP47Q6ZTR5 3102 aa5.13□□□□□ -1.59
PTPRT-206ENST00000373198 P0C880 135 aa5.12□□□□□ -1.59
PTPRT-206ENST00000373198 ADGRG4Q8IZF6 3080 aa5.11□□□□□ -1.59
PTPRT-206ENST00000373198 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
PTPRT-206ENST00000373198 NBEAQ8NFP9 2946 aa5.1□□□□□ -1.59
PTPRT-206ENST00000373198 LAMA3Q16787 3333 aa5.09□□□□□ -1.59
PTPRT-206ENST00000373198 KRTAP29-1A8MX34 341 aaPredicted RBP5.08□□□□□ -1.6
PTPRT-206ENST00000373198 TGP01266 2768 aa5.08□□□□□ -1.6
PTPRT-206ENST00000373198 DNAH14Q0VDD8 3507 aa5.07□□□□□ -1.6
PTPRT-206ENST00000373198 DMXL1Q9Y485 3027 aa5.05□□□□□ -1.6
PTPRT-206ENST00000373198 VCANP13611 3396 aa5.05□□□□□ -1.6
PTPRT-206ENST00000373198 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
PTPRT-206ENST00000373198 ZANQ9Y493 2812 aa5.03□□□□□ -1.6
PTPRT-206ENST00000373198 UNC80Q8N2C7 3258 aa5.03□□□□□ -1.6
PTPRT-206ENST00000373198 SRRM2Q9UQ35 2752 aaKnown RBP5.03□□□□□ -1.6
PTPRT-206ENST00000373198 SPEGQ15772 3267 aa5.03□□□□□ -1.6
PTPRT-206ENST00000373198 KRTAP11-1Q8IUC1 163 aa5.01□□□□□ -1.61
PTPRT-206ENST00000373198 FBN2P35556 2912 aa4.99□□□□□ -1.61
PTPRT-206ENST00000373198 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
PTPRT-206ENST00000373198 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
PTPRT-206ENST00000373198 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
PTPRT-206ENST00000373198 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
PTPRT-206ENST00000373198 Q6ZRN7 208 aaPredicted RBP4.93□□□□□ -1.62
PTPRT-206ENST00000373198 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
PTPRT-206ENST00000373198 BRCA2P51587 3418 aa4.9□□□□□ -1.63
PTPRT-206ENST00000373198 USP34Q70CQ2 3546 aa4.86□□□□□ -1.63
PTPRT-206ENST00000373198 TENM2Q9NT68 2774 aa4.86□□□□□ -1.63
PTPRT-206ENST00000373198 COL7A1Q02388 2944 aa4.86□□□□□ -1.63
PTPRT-206ENST00000373198 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
PTPRT-206ENST00000373198 H0YAA0 97 aa4.82□□□□□ -1.64
PTPRT-206ENST00000373198 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
PTPRT-206ENST00000373198 ZFHX4Q86UP3 3567 aa4.81□□□□□ -1.64
PTPRT-206ENST00000373198 XP32Q5T750 250 aa4.8□□□□□ -1.64
PTPRT-206ENST00000373198 NBPF19A0A087WUL8 3843 aa4.8□□□□□ -1.64
PTPRT-206ENST00000373198 SZT2Q5T011 3432 aa4.79□□□□□ -1.64
PTPRT-206ENST00000373198 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
PTPRT-206ENST00000373198 EYSQ5T1H1 3165 aa4.78□□□□□ -1.64
PTPRT-206ENST00000373198 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
PTPRT-206ENST00000373198 SPTBN5Q9NRC6 3674 aaKnown RBP4.73□□□□□ -1.65
PTPRT-206ENST00000373198 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
PTPRT-206ENST00000373198 CDH23Q9H251 3354 aa4.66□□□□□ -1.66
PTPRT-206ENST00000373198 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
PTPRT-206ENST00000373198 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
PTPRT-206ENST00000373198 HRNRQ86YZ3 2850 aaPredicted RBP4.64□□□□□ -1.67
PTPRT-206ENST00000373198 MYO15AQ9UKN7 3530 aa4.64□□□□□ -1.67
PTPRT-206ENST00000373198 LOC400499M0QZD8 3231 aa4.62□□□□□ -1.67
PTPRT-206ENST00000373198 WDFY3Q8IZQ1 3526 aa4.59□□□□□ -1.67
PTPRT-206ENST00000373198 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
PTPRT-206ENST00000373198 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
PTPRT-206ENST00000373198 LAMA5O15230 3695 aa4.56□□□□□ -1.68
PTPRT-206ENST00000373198 ASPMQ8IZT6 3477 aa4.55□□□□□ -1.68
PTPRT-206ENST00000373198 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
PTPRT-206ENST00000373198 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
PTPRT-206ENST00000373198 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
PTPRT-206ENST00000373198 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
PTPRT-206ENST00000373198 DMDP11532 3685 aa4.52□□□□□ -1.69
PTPRT-206ENST00000373198 KRTAP21-3Q3LHN1 58 aa4.52□□□□□ -1.69
PTPRT-206ENST00000373198 SMG1Q96Q15 3661 aaKnown RBP4.48□□□□□ -1.69
PTPRT-206ENST00000373198 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
PTPRT-206ENST00000373198 OTOGQ6ZRI0 2925 aa4.44□□□□□ -1.7
PTPRT-206ENST00000373198 SPENQ96T58 3664 aaKnown RBP4.42□□□□□ -1.7
PTPRT-206ENST00000373198 DCHS1Q96JQ0 3298 aa4.37□□□□□ -1.71
PTPRT-206ENST00000373198 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
PTPRT-206ENST00000373198 CSMD1Q96PZ7 3565 aa4.32□□□□□ -1.72
PTPRT-206ENST00000373198 TRRAPQ9Y4A5 3859 aa4.31□□□□□ -1.72
PTPRT-206ENST00000373198 RELNP78509 3460 aa4.3□□□□□ -1.72
PTPRT-206ENST00000373198 VPS13CQ709C8 3753 aa4.29□□□□□ -1.72
PTPRT-206ENST00000373198 AKAP9Q99996 3911 aa4.26□□□□□ -1.73
PTPRT-206ENST00000373198 INE1O15225 51 aa4.24□□□□□ -1.73
PTPRT-206ENST00000373198 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
PTPRT-206ENST00000373198 CSMD3Q7Z407 3707 aa4.17□□□□□ -1.74
PTPRT-206ENST00000373198 CUBNO60494 3623 aa4.14□□□□□ -1.75
PTPRT-206ENST00000373198 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
PTPRT-206ENST00000373198 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
PTPRT-206ENST00000373198 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
PTPRT-206ENST00000373198 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
PTPRT-206ENST00000373198 LYSTQ99698 3801 aa4.05□□□□□ -1.76
PTPRT-206ENST00000373198 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
PTPRT-206ENST00000373198 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
PTPRT-206ENST00000373198 MUC3AQ02505 3323 aa4.02□□□□□ -1.77
PTPRT-206ENST00000373198 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
PTPRT-206ENST00000373198 CSMD2Q7Z408 3487 aa3.98□□□□□ -1.77
PTPRT-206ENST00000373198 DNAH1Q9P2D7 4330 aa3.97□□□□□ -1.77
PTPRT-206ENST00000373198 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
PTPRT-206ENST00000373198 SVEP1Q4LDE5 3571 aa3.96□□□□□ -1.78
PTPRT-206ENST00000373198 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
PTPRT-206ENST00000373198 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms