RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
LDB3-203ENST00000372056 A0A087X002 238 aa7.6□□□□□ -1.19
LDB3-203ENST00000372056 SPAG11AQ6PDA7 123 aa7.6□□□□□ -1.19
LDB3-203ENST00000372056 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
LDB3-203ENST00000372056 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
LDB3-203ENST00000372056 KRTAP13-2Q52LG2 175 aa7.58□□□□□ -1.2
LDB3-203ENST00000372056 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
LDB3-203ENST00000372056 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
LDB3-203ENST00000372056 SPINK1P00995 79 aa7.55□□□□□ -1.2
LDB3-203ENST00000372056 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
LDB3-203ENST00000372056 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
LDB3-203ENST00000372056 NDUFB1O75438 58 aa7.55□□□□□ -1.2
LDB3-203ENST00000372056 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
LDB3-203ENST00000372056 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
LDB3-203ENST00000372056 BIRC6Q9NR09 4857 aa7.53□□□□□ -1.2
LDB3-203ENST00000372056 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
LDB3-203ENST00000372056 CASC2Q6XLA1 102 aa7.53□□□□□ -1.2
LDB3-203ENST00000372056 MMP24-AS1A0A0U1RRL7 71 aa7.51□□□□□ -1.21
LDB3-203ENST00000372056 ZCCHC13Q8WW36 166 aaKnown RBP7.51□□□□□ -1.21
LDB3-203ENST00000372056 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
LDB3-203ENST00000372056 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
LDB3-203ENST00000372056 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
LDB3-203ENST00000372056 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
LDB3-203ENST00000372056 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
LDB3-203ENST00000372056 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
LDB3-203ENST00000372056 MPLKIPQ8TAP9 179 aa7.44□□□□□ -1.22
LDB3-203ENST00000372056 FAT1Q14517 4588 aa7.43□□□□□ -1.22
LDB3-203ENST00000372056 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
LDB3-203ENST00000372056 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
LDB3-203ENST00000372056 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
LDB3-203ENST00000372056 EPPK1P58107 5090 aaKnown RBP7.42□□□□□ -1.22
LDB3-203ENST00000372056 Q1T7F1 81 aa7.42□□□□□ -1.22
LDB3-203ENST00000372056 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
LDB3-203ENST00000372056 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
LDB3-203ENST00000372056 RYR1P21817 5038 aa7.4□□□□□ -1.22
LDB3-203ENST00000372056 C1orf64Q8NEQ6 169 aa7.4□□□□□ -1.23
LDB3-203ENST00000372056 HSPG2P98160 4391 aa7.39□□□□□ -1.23
LDB3-203ENST00000372056 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
LDB3-203ENST00000372056 MP68P56378 58 aa7.38□□□□□ -1.23
LDB3-203ENST00000372056 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
LDB3-203ENST00000372056 C8orf87E5RJ46 101 aa7.36□□□□□ -1.23
LDB3-203ENST00000372056 H0Y9P7 68 aa7.36□□□□□ -1.23
LDB3-203ENST00000372056 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
LDB3-203ENST00000372056 H3BPC8 53 aa7.34□□□□□ -1.23
LDB3-203ENST00000372056 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
LDB3-203ENST00000372056 PKHD1L1Q86WI1 4243 aa7.34□□□□□ -1.23
LDB3-203ENST00000372056 NDUFS5O43920 106 aa7.33□□□□□ -1.24
LDB3-203ENST00000372056 LINC00313P59037 77 aa7.32□□□□□ -1.24
LDB3-203ENST00000372056 KIAA1109Q2LD37 5005 aa7.31□□□□□ -1.24
LDB3-203ENST00000372056 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
LDB3-203ENST00000372056 V9GYY9 64 aa7.28□□□□□ -1.24
LDB3-203ENST00000372056 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
LDB3-203ENST00000372056 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
LDB3-203ENST00000372056 Q8N9P0 234 aaPredicted RBP7.26□□□□□ -1.25
LDB3-203ENST00000372056 KRTAP13-3Q3SY46 172 aa7.24□□□□□ -1.25
LDB3-203ENST00000372056 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
LDB3-203ENST00000372056 PRR4Q16378 134 aa7.24□□□□□ -1.25
LDB3-203ENST00000372056 Q5W150 140 aa7.24□□□□□ -1.25
LDB3-203ENST00000372056 J3QL48 77 aa7.23□□□□□ -1.25
LDB3-203ENST00000372056 PSPHP1O15172 72 aa7.22□□□□□ -1.25
LDB3-203ENST00000372056 A8MUN3 132 aa7.19□□□□□ -1.26
LDB3-203ENST00000372056 Q5VV11 94 aa7.19□□□□□ -1.26
LDB3-203ENST00000372056 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
LDB3-203ENST00000372056 LOC101927531A0A1B0GV80 90 aa7.17□□□□□ -1.26
LDB3-203ENST00000372056 HERC2O95714 4834 aa7.16□□□□□ -1.26
LDB3-203ENST00000372056 PCOTHQ58A44 107 aa7.16□□□□□ -1.26
LDB3-203ENST00000372056 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
LDB3-203ENST00000372056 PMAIP1Q13794 54 aa7.15□□□□□ -1.26
LDB3-203ENST00000372056 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
LDB3-203ENST00000372056 SEC61GP60059 68 aa7.13□□□□□ -1.27
LDB3-203ENST00000372056 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
LDB3-203ENST00000372056 TNXBP22105 4242 aa7.12□□□□□ -1.27
LDB3-203ENST00000372056 PCLOQ9Y6V0 5065 aa7.12□□□□□ -1.27
LDB3-203ENST00000372056 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
LDB3-203ENST00000372056 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
LDB3-203ENST00000372056 Q75L30 129 aa7.1□□□□□ -1.27
LDB3-203ENST00000372056 COA5Q86WW8 74 aa7.09□□□□□ -1.27
LDB3-203ENST00000372056 IGKV2-30P06310 120 aa7.09□□□□□ -1.28
LDB3-203ENST00000372056 C9orf92A6NGG3 77 aa7.08□□□□□ -1.28
LDB3-203ENST00000372056 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
LDB3-203ENST00000372056 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
LDB3-203ENST00000372056 PRR15LQ9BU68 103 aa7.08□□□□□ -1.28
LDB3-203ENST00000372056 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
LDB3-203ENST00000372056 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
LDB3-203ENST00000372056 A8MU10 97 aa7.06□□□□□ -1.28
LDB3-203ENST00000372056 A8MUU9 505 aa7.05□□□□□ -1.28
LDB3-203ENST00000372056 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
LDB3-203ENST00000372056 LCA10Q71F78 164 aa7.02□□□□□ -1.28
LDB3-203ENST00000372056 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
LDB3-203ENST00000372056 HRES1P13985 223 aa7.02□□□□□ -1.29
LDB3-203ENST00000372056 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
LDB3-203ENST00000372056 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
LDB3-203ENST00000372056 A6NED7 52 aa6.97□□□□□ -1.29
LDB3-203ENST00000372056 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
LDB3-203ENST00000372056 XP32Q5T750 250 aa6.96□□□□□ -1.29
LDB3-203ENST00000372056 C7orf65Q6ZTY9 151 aa6.96□□□□□ -1.29
LDB3-203ENST00000372056 A6NN06 94 aa6.96□□□□□ -1.3
LDB3-203ENST00000372056 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.3
LDB3-203ENST00000372056 DMAC1Q96GE9 116 aa6.96□□□□□ -1.3
LDB3-203ENST00000372056 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms