RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 NDUFS5O43920 106 aa12.92□□□□□ -0.34
CNN3-201ENST00000370206 DNAH5Q8TE73 4624 aa12.92□□□□□ -0.34
CNN3-201ENST00000370206 KRTAP10-1P60331 282 aa12.91□□□□□ -0.34
CNN3-201ENST00000370206 DNAH11Q96DT5 4516 aa12.91□□□□□ -0.34
CNN3-201ENST00000370206 Q1T7F1 81 aa12.9□□□□□ -0.34
CNN3-201ENST00000370206 SPINK6Q6UWN8 80 aa12.9□□□□□ -0.34
CNN3-201ENST00000370206 ALMS1Q8TCU4 4167 aa12.88□□□□□ -0.35
CNN3-201ENST00000370206 IGLV7-46A0A075B6I9 117 aa12.86□□□□□ -0.35
CNN3-201ENST00000370206 PCOTHQ58A44 107 aa12.83□□□□□ -0.36
CNN3-201ENST00000370206 PRO0628Q9UI54 55 aa12.82□□□□□ -0.36
CNN3-201ENST00000370206 KRTAP13-2Q52LG2 175 aa12.81□□□□□ -0.36
CNN3-201ENST00000370206 C8orf87E5RJ46 101 aa12.78□□□□□ -0.36
CNN3-201ENST00000370206 PKD1P98161 4303 aa12.75□□□□□ -0.37
CNN3-201ENST00000370206 BRK1Q8WUW1 75 aa12.74□□□□□ -0.37
CNN3-201ENST00000370206 V9GYY9 64 aa12.74□□□□□ -0.37
CNN3-201ENST00000370206 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
CNN3-201ENST00000370206 KRTAP21-3Q3LHN1 58 aa12.73□□□□□ -0.37
CNN3-201ENST00000370206 KRTAP13-3Q3SY46 172 aa12.73□□□□□ -0.37
CNN3-201ENST00000370206 KRTAP1-4P0C5Y4 121 aa12.72□□□□□ -0.37
CNN3-201ENST00000370206 COA5Q86WW8 74 aa12.72□□□□□ -0.37
CNN3-201ENST00000370206 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.37
CNN3-201ENST00000370206 LOC101927531A0A1B0GV80 90 aa12.71□□□□□ -0.37
CNN3-201ENST00000370206 Q5W150 140 aa12.71□□□□□ -0.37
CNN3-201ENST00000370206 C1orf195Q5TG92 126 aa12.7□□□□□ -0.38
CNN3-201ENST00000370206 PSPHP1O15172 72 aa12.69□□□□□ -0.38
CNN3-201ENST00000370206 HYDINQ4G0P3 5121 aa12.67□□□□□ -0.38
CNN3-201ENST00000370206 LINC00313P59037 77 aa12.67□□□□□ -0.38
CNN3-201ENST00000370206 Q8N9P0 234 aaPredicted RBP12.67□□□□□ -0.38
CNN3-201ENST00000370206 A8MUN3 132 aa12.62□□□□□ -0.39
CNN3-201ENST00000370206 LIMD2Q9BT23 127 aa12.62□□□□□ -0.39
CNN3-201ENST00000370206 PLA2G1BP04054 148 aaKnown RBP12.56□□□□□ -0.4
CNN3-201ENST00000370206 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
CNN3-201ENST00000370206 HRES1P13985 223 aa12.56□□□□□ -0.4
CNN3-201ENST00000370206 Q5VV11 94 aa12.56□□□□□ -0.4
CNN3-201ENST00000370206 KRTAP16-1A8MUX0 517 aa12.54□□□□□ -0.4
CNN3-201ENST00000370206 TYMSOSQ8TAI1 123 aa12.53□□□□□ -0.4
CNN3-201ENST00000370206 VPS13BQ7Z7G8 4022 aa12.52□□□□□ -0.4
CNN3-201ENST00000370206 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.41
CNN3-201ENST00000370206 PRR15LQ9BU68 103 aa12.5□□□□□ -0.41
CNN3-201ENST00000370206 SPINK1P00995 79 aa12.48□□□□□ -0.41
CNN3-201ENST00000370206 RETNLBQ9BQ08 111 aa12.45□□□□□ -0.42
CNN3-201ENST00000370206 IGKV2-30P06310 120 aa12.45□□□□□ -0.42
CNN3-201ENST00000370206 LINC01558Q9Y6Z2 57 aa12.42□□□□□ -0.42
CNN3-201ENST00000370206 CHKB-CPT1BH3BT56 60 aa12.42□□□□□ -0.42
CNN3-201ENST00000370206 SPAG11AQ6PDA7 123 aa12.41□□□□□ -0.42
CNN3-201ENST00000370206 Q75L30 129 aa12.41□□□□□ -0.42
CNN3-201ENST00000370206 SACSQ9NZJ4 4579 aa12.39□□□□□ -0.43
CNN3-201ENST00000370206 ACYP2P14621 99 aa12.39□□□□□ -0.43
CNN3-201ENST00000370206 PRR26Q8N8Z3 221 aa12.38□□□□□ -0.43
CNN3-201ENST00000370206 DMAC1Q96GE9 116 aa12.38□□□□□ -0.43
CNN3-201ENST00000370206 RPS29P62273 56 aaKnown RBP12.37□□□□□ -0.43
CNN3-201ENST00000370206 LINC00304Q8N9R0 145 aa12.36□□□□□ -0.43
CNN3-201ENST00000370206 PKHD1P08F94 4074 aa12.36□□□□□ -0.43
CNN3-201ENST00000370206 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
CNN3-201ENST00000370206 SMR3BP02814 79 aaPredicted RBP12.32□□□□□ -0.44
CNN3-201ENST00000370206 A8MU10 97 aa12.28□□□□□ -0.44
CNN3-201ENST00000370206 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.45
CNN3-201ENST00000370206 IGKV2D-30A0A075B6S6 120 aa12.26□□□□□ -0.45
CNN3-201ENST00000370206 A6NED7 52 aa12.25□□□□□ -0.45
CNN3-201ENST00000370206 KRTAP10-4P60372 401 aaPredicted RBP12.23□□□□□ -0.45
CNN3-201ENST00000370206 LCA10Q71F78 164 aa12.2□□□□□ -0.46
CNN3-201ENST00000370206 CDC42SE1Q9NRR8 79 aa12.13□□□□□ -0.47
CNN3-201ENST00000370206 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
CNN3-201ENST00000370206 SPINK7P58062 85 aa12.11□□□□□ -0.47
CNN3-201ENST00000370206 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
CNN3-201ENST00000370206 PKHD1L1Q86WI1 4243 aa12.08□□□□□ -0.48
CNN3-201ENST00000370206 FAT1Q14517 4588 aa12.08□□□□□ -0.48
CNN3-201ENST00000370206 ATP11AUNQ6ZP68 121 aa12.07□□□□□ -0.48
CNN3-201ENST00000370206 C20orf166-AS1Q96NR2 134 aa12.04□□□□□ -0.48
CNN3-201ENST00000370206 A8MUU9 505 aa12.03□□□□□ -0.48
CNN3-201ENST00000370206 PMAIP1Q13794 54 aa12.03□□□□□ -0.48
CNN3-201ENST00000370206 C9orf92A6NGG3 77 aa12.03□□□□□ -0.48
CNN3-201ENST00000370206 SPTSSBQ8NFR3 76 aa12.03□□□□□ -0.48
CNN3-201ENST00000370206 RYR2Q92736 4967 aa12□□□□□ -0.49
CNN3-201ENST00000370206 A0A1B0GU69 56 aa11.99□□□□□ -0.49
CNN3-201ENST00000370206 Q8N1X5 172 aa11.95□□□□□ -0.5
CNN3-201ENST00000370206 A6NN06 94 aa11.88□□□□□ -0.51
CNN3-201ENST00000370206 FLG2Q5D862 2391 aaPredicted RBP11.84□□□□□ -0.51
CNN3-201ENST00000370206 KMT2CQ8NEZ4 4911 aaKnown RBP11.81□□□□□ -0.52
CNN3-201ENST00000370206 SPATA8Q6RVD6 105 aa11.77□□□□□ -0.53
CNN3-201ENST00000370206 KRTAP10-8P60410 259 aa11.77□□□□□ -0.53
CNN3-201ENST00000370206 KTN1-AS1Q86SY8 53 aa11.77□□□□□ -0.53
CNN3-201ENST00000370206 UQCR11O14957 56 aa11.75□□□□□ -0.53
CNN3-201ENST00000370206 KRTAP3-1Q9BYR8 98 aa11.75□□□□□ -0.53
CNN3-201ENST00000370206 Q5VSD8 79 aa11.74□□□□□ -0.53
CNN3-201ENST00000370206 MIR22HGQ0VDD5 57 aa11.71□□□□□ -0.54
CNN3-201ENST00000370206 SEC61GP60059 68 aa11.65□□□□□ -0.54
CNN3-201ENST00000370206 TNXBP22105 4242 aa11.65□□□□□ -0.54
CNN3-201ENST00000370206 HSPG2P98160 4391 aa11.64□□□□□ -0.55
CNN3-201ENST00000370206 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
CNN3-201ENST00000370206 LRP1Q07954 4544 aaKnown RBP11.61□□□□□ -0.55
CNN3-201ENST00000370206 COX6B2Q6YFQ2 88 aa11.6□□□□□ -0.55
CNN3-201ENST00000370206 RPL37P61927 97 aaKnown RBP11.53□□□□□ -0.56
CNN3-201ENST00000370206 KRTAP17-1Q9BYP8 105 aa11.52□□□□□ -0.56
CNN3-201ENST00000370206 RYR1P21817 5038 aa11.48□□□□□ -0.57
CNN3-201ENST00000370206 XP32Q5T750 250 aa11.48□□□□□ -0.57
CNN3-201ENST00000370206 DMBT1Q9UGM3 2413 aaPredicted RBP11.45□□□□□ -0.58
CNN3-201ENST00000370206 RYR3Q15413 4870 aa11.44□□□□□ -0.58
CNN3-201ENST00000370206 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
CNN3-201ENST00000370206 H0YAA0 97 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms