RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SEC61GP60059 68 aa8.74□□□□□ -1.01
PRPF38B-202ENST00000370022 OBSCN-AS1Q96MR7 158 aa8.74□□□□□ -1.01
PRPF38B-202ENST00000370022 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
PRPF38B-202ENST00000370022 A0A087WSZ3 146 aa8.73□□□□□ -1.01
PRPF38B-202ENST00000370022 LOC110117498A0A087WWA1 95 aa8.73□□□□□ -1.01
PRPF38B-202ENST00000370022 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
PRPF38B-202ENST00000370022 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
PRPF38B-202ENST00000370022 V9GYY9 64 aa8.71□□□□□ -1.02
PRPF38B-202ENST00000370022 Q6ZQT0 140 aa8.69□□□□□ -1.02
PRPF38B-202ENST00000370022 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
PRPF38B-202ENST00000370022 A0A1B0GW54 56 aa8.69□□□□□ -1.02
PRPF38B-202ENST00000370022 SERP1Q9Y6X1 66 aa8.67□□□□□ -1.02
PRPF38B-202ENST00000370022 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.02
PRPF38B-202ENST00000370022 LRP2P98164 4655 aa8.65□□□□□ -1.02
PRPF38B-202ENST00000370022 LPAP08519 4548 aa8.61□□□□□ -1.03
PRPF38B-202ENST00000370022 SMIM26A0A096LP01 95 aa8.61□□□□□ -1.03
PRPF38B-202ENST00000370022 Q96NJ1 140 aa8.61□□□□□ -1.03
PRPF38B-202ENST00000370022 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
PRPF38B-202ENST00000370022 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
PRPF38B-202ENST00000370022 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
PRPF38B-202ENST00000370022 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
PRPF38B-202ENST00000370022 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
PRPF38B-202ENST00000370022 IGKV4-1P06312 121 aa8.55□□□□□ -1.04
PRPF38B-202ENST00000370022 ATP5EP56381 51 aaPredicted RBP8.55□□□□□ -1.04
PRPF38B-202ENST00000370022 C9orf92A6NGG3 77 aa8.53□□□□□ -1.04
PRPF38B-202ENST00000370022 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
PRPF38B-202ENST00000370022 NREPQ16612 68 aa8.52□□□□□ -1.05
PRPF38B-202ENST00000370022 XP32Q5T750 250 aa8.52□□□□□ -1.05
PRPF38B-202ENST00000370022 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
PRPF38B-202ENST00000370022 NDUFC1O43677 76 aa8.48□□□□□ -1.05
PRPF38B-202ENST00000370022 KLKP1Q107X0 134 aa8.46□□□□□ -1.06
PRPF38B-202ENST00000370022 NDUFB1O75438 58 aa8.44□□□□□ -1.06
PRPF38B-202ENST00000370022 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
PRPF38B-202ENST00000370022 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
PRPF38B-202ENST00000370022 A0A1B0GVX0 72 aa8.44□□□□□ -1.06
PRPF38B-202ENST00000370022 H7BZZ5 65 aa8.44□□□□□ -1.06
PRPF38B-202ENST00000370022 LINC00313P59037 77 aa8.43□□□□□ -1.06
PRPF38B-202ENST00000370022 Q6ZVQ6 151 aa8.43□□□□□ -1.06
PRPF38B-202ENST00000370022 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
PRPF38B-202ENST00000370022 A8MWP4 228 aa8.42□□□□□ -1.06
PRPF38B-202ENST00000370022 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
PRPF38B-202ENST00000370022 IGHV6-1A0A0B4J1U7 121 aa8.41□□□□□ -1.06
PRPF38B-202ENST00000370022 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
PRPF38B-202ENST00000370022 DSCR10P59022 87 aa8.4□□□□□ -1.06
PRPF38B-202ENST00000370022 BPY2O14599 106 aa8.39□□□□□ -1.07
PRPF38B-202ENST00000370022 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
PRPF38B-202ENST00000370022 IGKV3D-7A0A0C4DH55 119 aa8.39□□□□□ -1.07
PRPF38B-202ENST00000370022 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
PRPF38B-202ENST00000370022 Q75L30 129 aa8.38□□□□□ -1.07
PRPF38B-202ENST00000370022 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
PRPF38B-202ENST00000370022 C20orf197Q8N268 126 aa8.38□□□□□ -1.07
PRPF38B-202ENST00000370022 PMAIP1Q13794 54 aa8.37□□□□□ -1.07
PRPF38B-202ENST00000370022 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
PRPF38B-202ENST00000370022 A0A087WVE0 104 aa8.35□□□□□ -1.07
PRPF38B-202ENST00000370022 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
PRPF38B-202ENST00000370022 C20orf166-AS1Q96NR2 134 aa8.35□□□□□ -1.07
PRPF38B-202ENST00000370022 A8MUU9 505 aa8.34□□□□□ -1.07
PRPF38B-202ENST00000370022 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.07
PRPF38B-202ENST00000370022 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
PRPF38B-202ENST00000370022 K7EQZ3 153 aa8.31□□□□□ -1.08
PRPF38B-202ENST00000370022 PCOTHQ58A44 107 aa8.31□□□□□ -1.08
PRPF38B-202ENST00000370022 ATP11AUNQ6ZP68 121 aa8.31□□□□□ -1.08
PRPF38B-202ENST00000370022 A0A0U1RQV1 116 aa8.29□□□□□ -1.08
PRPF38B-202ENST00000370022 CXCL6P80162 114 aa8.28□□□□□ -1.08
PRPF38B-202ENST00000370022 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
PRPF38B-202ENST00000370022 Q8N9L7 120 aa8.24□□□□□ -1.09
PRPF38B-202ENST00000370022 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
PRPF38B-202ENST00000370022 MUC2Q02817 5179 aa8.23□□□□□ -1.09
PRPF38B-202ENST00000370022 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
PRPF38B-202ENST00000370022 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
PRPF38B-202ENST00000370022 MRPL34Q9BQ48 92 aaKnown RBP8.22□□□□□ -1.09
PRPF38B-202ENST00000370022 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
PRPF38B-202ENST00000370022 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
PRPF38B-202ENST00000370022 Q1T7F1 81 aa8.18□□□□□ -1.1
PRPF38B-202ENST00000370022 HCG22E2RYF7 251 aa8.17□□□□□ -1.1
PRPF38B-202ENST00000370022 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
PRPF38B-202ENST00000370022 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
PRPF38B-202ENST00000370022 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
PRPF38B-202ENST00000370022 NDUFS5O43920 106 aa8.12□□□□□ -1.11
PRPF38B-202ENST00000370022 MPLKIPQ8TAP9 179 aa8.1□□□□□ -1.11
PRPF38B-202ENST00000370022 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
PRPF38B-202ENST00000370022 TP53AIP1Q9HCN2 124 aa8.03□□□□□ -1.12
PRPF38B-202ENST00000370022 FAT4Q6V0I7 4981 aa8.01□□□□□ -1.13
PRPF38B-202ENST00000370022 SPINK7P58062 85 aa8□□□□□ -1.13
PRPF38B-202ENST00000370022 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
PRPF38B-202ENST00000370022 Q5W150 140 aa7.98□□□□□ -1.13
PRPF38B-202ENST00000370022 OCR1Q9BZK8 76 aa7.98□□□□□ -1.13
PRPF38B-202ENST00000370022 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
PRPF38B-202ENST00000370022 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
PRPF38B-202ENST00000370022 HRES1P13985 223 aa7.94□□□□□ -1.14
PRPF38B-202ENST00000370022 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
PRPF38B-202ENST00000370022 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
PRPF38B-202ENST00000370022 TRAV22A0A0B4J277 110 aa7.93□□□□□ -1.14
PRPF38B-202ENST00000370022 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
PRPF38B-202ENST00000370022 C7orf65Q6ZTY9 151 aa7.92□□□□□ -1.14
PRPF38B-202ENST00000370022 IGKV2D-30A0A075B6S6 120 aa7.89□□□□□ -1.15
PRPF38B-202ENST00000370022 IGKV2-30P06310 120 aa7.89□□□□□ -1.15
PRPF38B-202ENST00000370022 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
PRPF38B-202ENST00000370022 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
PRPF38B-202ENST00000370022 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms