RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
UBE3D-203ENST00000369747 A0A0U1RQV1 116 aa10.11□□□□□ -0.79
UBE3D-203ENST00000369747 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
UBE3D-203ENST00000369747 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
UBE3D-203ENST00000369747 FAT3Q8TDW7 4589 aa10.09□□□□□ -0.79
UBE3D-203ENST00000369747 CASC2Q6XLA1 102 aa10.09□□□□□ -0.79
UBE3D-203ENST00000369747 PRR26Q8N8Z3 221 aa10.09□□□□□ -0.79
UBE3D-203ENST00000369747 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
UBE3D-203ENST00000369747 MMP24-AS1A0A0U1RRL7 71 aa10.07□□□□□ -0.8
UBE3D-203ENST00000369747 NDUFC1O43677 76 aa10.07□□□□□ -0.8
UBE3D-203ENST00000369747 NDUFB1O75438 58 aa10.07□□□□□ -0.8
UBE3D-203ENST00000369747 CD164Q04900 197 aa10.05□□□□□ -0.8
UBE3D-203ENST00000369747 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
UBE3D-203ENST00000369747 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
UBE3D-203ENST00000369747 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
UBE3D-203ENST00000369747 C5orf47Q569G3 176 aa10.03□□□□□ -0.8
UBE3D-203ENST00000369747 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
UBE3D-203ENST00000369747 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
UBE3D-203ENST00000369747 TNXBP22105 4242 aa10.01□□□□□ -0.81
UBE3D-203ENST00000369747 A0A1B0GVX0 72 aa10□□□□□ -0.81
UBE3D-203ENST00000369747 hDV103S1A0JD37 113 aa9.99□□□□□ -0.81
UBE3D-203ENST00000369747 ASB16-AS1Q495Z4 193 aa9.99□□□□□ -0.81
UBE3D-203ENST00000369747 ZCCHC13Q8WW36 166 aaKnown RBP9.99□□□□□ -0.81
UBE3D-203ENST00000369747 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
UBE3D-203ENST00000369747 C8orf17Q9NRJ1 99 aa9.99□□□□□ -0.81
UBE3D-203ENST00000369747 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
UBE3D-203ENST00000369747 OXTP01178 125 aa9.95□□□□□ -0.82
UBE3D-203ENST00000369747 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
UBE3D-203ENST00000369747 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
UBE3D-203ENST00000369747 MP68P56378 58 aa9.92□□□□□ -0.82
UBE3D-203ENST00000369747 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
UBE3D-203ENST00000369747 ATP5EP56381 51 aaPredicted RBP9.92□□□□□ -0.82
UBE3D-203ENST00000369747 H0Y9P7 68 aa9.9□□□□□ -0.82
UBE3D-203ENST00000369747 Q5XG85 94 aa9.9□□□□□ -0.83
UBE3D-203ENST00000369747 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
UBE3D-203ENST00000369747 LINC00208Q96KT6 92 aa9.88□□□□□ -0.83
UBE3D-203ENST00000369747 SERP1Q9Y6X1 66 aa9.88□□□□□ -0.83
UBE3D-203ENST00000369747 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
UBE3D-203ENST00000369747 MRPL34Q9BQ48 92 aaKnown RBP9.87□□□□□ -0.83
UBE3D-203ENST00000369747 H3BPC8 53 aa9.86□□□□□ -0.83
UBE3D-203ENST00000369747 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
UBE3D-203ENST00000369747 TRAV22A0A0B4J277 110 aa9.85□□□□□ -0.83
UBE3D-203ENST00000369747 C1orf195Q5TG92 126 aa9.85□□□□□ -0.83
UBE3D-203ENST00000369747 C4orf48Q5BLP8 95 aa9.84□□□□□ -0.83
UBE3D-203ENST00000369747 NDUFS5O43920 106 aa9.82□□□□□ -0.84
UBE3D-203ENST00000369747 SPINK1P00995 79 aa9.82□□□□□ -0.84
UBE3D-203ENST00000369747 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
UBE3D-203ENST00000369747 SPAG11AQ6PDA7 123 aa9.8□□□□□ -0.84
UBE3D-203ENST00000369747 C1orf64Q8NEQ6 169 aa9.8□□□□□ -0.84
UBE3D-203ENST00000369747 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
UBE3D-203ENST00000369747 J3QL48 77 aa9.76□□□□□ -0.85
UBE3D-203ENST00000369747 LINC00313P59037 77 aa9.74□□□□□ -0.85
UBE3D-203ENST00000369747 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
UBE3D-203ENST00000369747 CYP4F30PQ9H0H9 118 aa9.72□□□□□ -0.85
UBE3D-203ENST00000369747 PRR4Q16378 134 aa9.71□□□□□ -0.86
UBE3D-203ENST00000369747 HERC1Q15751 4861 aa9.7□□□□□ -0.86
UBE3D-203ENST00000369747 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
UBE3D-203ENST00000369747 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
UBE3D-203ENST00000369747 Q5W150 140 aa9.69□□□□□ -0.86
UBE3D-203ENST00000369747 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
UBE3D-203ENST00000369747 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
UBE3D-203ENST00000369747 Q8N9P0 234 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-203ENST00000369747 SMIM26A0A096LP01 95 aa9.66□□□□□ -0.86
UBE3D-203ENST00000369747 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
UBE3D-203ENST00000369747 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
UBE3D-203ENST00000369747 IGLV7-46A0A075B6I9 117 aa9.6□□□□□ -0.87
UBE3D-203ENST00000369747 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
UBE3D-203ENST00000369747 C4orf26Q17RF5 130 aa9.59□□□□□ -0.87
UBE3D-203ENST00000369747 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
UBE3D-203ENST00000369747 LPAP08519 4548 aa9.48□□□□□ -0.89
UBE3D-203ENST00000369747 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
UBE3D-203ENST00000369747 COA5Q86WW8 74 aa9.45□□□□□ -0.9
UBE3D-203ENST00000369747 HMCN2Q8NDA2 5059 aa9.44□□□□□ -0.9
UBE3D-203ENST00000369747 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
UBE3D-203ENST00000369747 HRES1P13985 223 aa9.41□□□□□ -0.9
UBE3D-203ENST00000369747 Q1T7F1 81 aa9.41□□□□□ -0.9
UBE3D-203ENST00000369747 LRP2P98164 4655 aa9.39□□□□□ -0.91
UBE3D-203ENST00000369747 IGKV2D-30A0A075B6S6 120 aa9.37□□□□□ -0.91
UBE3D-203ENST00000369747 A8MUU9 505 aa9.35□□□□□ -0.91
UBE3D-203ENST00000369747 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
UBE3D-203ENST00000369747 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
UBE3D-203ENST00000369747 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
UBE3D-203ENST00000369747 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
UBE3D-203ENST00000369747 DMAC1Q96GE9 116 aa9.32□□□□□ -0.92
UBE3D-203ENST00000369747 V9GYY9 64 aa9.29□□□□□ -0.92
UBE3D-203ENST00000369747 ACYP2P14621 99 aa9.29□□□□□ -0.92
UBE3D-203ENST00000369747 XP32Q5T750 250 aa9.28□□□□□ -0.92
UBE3D-203ENST00000369747 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
UBE3D-203ENST00000369747 PSPHP1O15172 72 aa9.26□□□□□ -0.93
UBE3D-203ENST00000369747 A8MUN3 132 aa9.23□□□□□ -0.93
UBE3D-203ENST00000369747 Q75L30 129 aa9.21□□□□□ -0.94
UBE3D-203ENST00000369747 Q5VV11 94 aa9.18□□□□□ -0.94
UBE3D-203ENST00000369747 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
UBE3D-203ENST00000369747 LINC01558Q9Y6Z2 57 aa9.16□□□□□ -0.94
UBE3D-203ENST00000369747 CHKB-CPT1BH3BT56 60 aa9.15□□□□□ -0.94
UBE3D-203ENST00000369747 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
UBE3D-203ENST00000369747 SVIPQ8NHG7 77 aa9.15□□□□□ -0.95
UBE3D-203ENST00000369747 BRK1Q8WUW1 75 aa9.13□□□□□ -0.95
UBE3D-203ENST00000369747 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
UBE3D-203ENST00000369747 SPINK7P58062 85 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms