RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 DNHD1Q96M86 4753 aa7.77□□□□□ -1.17
CHD1L-202ENST00000369258 LOC101927531A0A1B0GV80 90 aa7.76□□□□□ -1.17
CHD1L-202ENST00000369258 RETNLBQ9BQ08 111 aa7.76□□□□□ -1.17
CHD1L-202ENST00000369258 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
CHD1L-202ENST00000369258 LCA10Q71F78 164 aa7.75□□□□□ -1.17
CHD1L-202ENST00000369258 ALMS1Q8TCU4 4167 aa7.75□□□□□ -1.17
CHD1L-202ENST00000369258 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
CHD1L-202ENST00000369258 Q6ZR54 194 aa7.74□□□□□ -1.17
CHD1L-202ENST00000369258 NBDYA0A0U1RRE5 68 aa7.72□□□□□ -1.17
CHD1L-202ENST00000369258 ATP11AUNQ6ZP68 121 aa7.72□□□□□ -1.17
CHD1L-202ENST00000369258 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.17
CHD1L-202ENST00000369258 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.18
CHD1L-202ENST00000369258 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
CHD1L-202ENST00000369258 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
CHD1L-202ENST00000369258 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
CHD1L-202ENST00000369258 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
CHD1L-202ENST00000369258 HRES1P13985 223 aa7.69□□□□□ -1.18
CHD1L-202ENST00000369258 LINC00483Q53H64 154 aa7.68□□□□□ -1.18
CHD1L-202ENST00000369258 ZNF706Q9Y5V0 76 aaPredicted RBP7.68□□□□□ -1.18
CHD1L-202ENST00000369258 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
CHD1L-202ENST00000369258 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
CHD1L-202ENST00000369258 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
CHD1L-202ENST00000369258 Q5W150 140 aa7.67□□□□□ -1.18
CHD1L-202ENST00000369258 WWC2-AS2Q96NR7 200 aa7.67□□□□□ -1.18
CHD1L-202ENST00000369258 DNAH5Q8TE73 4624 aa7.66□□□□□ -1.18
CHD1L-202ENST00000369258 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
CHD1L-202ENST00000369258 CIRBP-AS1Q8TBR5 109 aa7.66□□□□□ -1.18
CHD1L-202ENST00000369258 PLAC8Q9NZF1 115 aa7.65□□□□□ -1.19
CHD1L-202ENST00000369258 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
CHD1L-202ENST00000369258 A6NN06 94 aa7.62□□□□□ -1.19
CHD1L-202ENST00000369258 RTL8CO15255 209 aa7.62□□□□□ -1.19
CHD1L-202ENST00000369258 SPINK7P58062 85 aa7.62□□□□□ -1.19
CHD1L-202ENST00000369258 A0A087WTM6 91 aa7.62□□□□□ -1.19
CHD1L-202ENST00000369258 VPS13BQ7Z7G8 4022 aa7.6□□□□□ -1.19
CHD1L-202ENST00000369258 IGLV5-52A0A0A0MRZ9 124 aa7.6□□□□□ -1.19
CHD1L-202ENST00000369258 ZNF861PO60384 105 aa7.6□□□□□ -1.19
CHD1L-202ENST00000369258 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
CHD1L-202ENST00000369258 PKHD1P08F94 4074 aa7.56□□□□□ -1.2
CHD1L-202ENST00000369258 NUPR2A6NF83 97 aa7.56□□□□□ -1.2
CHD1L-202ENST00000369258 ACYP2P14621 99 aa7.54□□□□□ -1.2
CHD1L-202ENST00000369258 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
CHD1L-202ENST00000369258 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
CHD1L-202ENST00000369258 LY6G6CO95867 125 aa7.49□□□□□ -1.21
CHD1L-202ENST00000369258 C8orf87E5RJ46 101 aa7.48□□□□□ -1.21
CHD1L-202ENST00000369258 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
CHD1L-202ENST00000369258 IGLV7-43P04211 117 aa7.47□□□□□ -1.21
CHD1L-202ENST00000369258 LINC00313P59037 77 aa7.45□□□□□ -1.22
CHD1L-202ENST00000369258 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
CHD1L-202ENST00000369258 PKD1P98161 4303 aa7.44□□□□□ -1.22
CHD1L-202ENST00000369258 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
CHD1L-202ENST00000369258 FAM229AH3BQW9 127 aa7.44□□□□□ -1.22
CHD1L-202ENST00000369258 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
CHD1L-202ENST00000369258 A0A1B0GU69 56 aa7.42□□□□□ -1.22
CHD1L-202ENST00000369258 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
CHD1L-202ENST00000369258 FAT1Q14517 4588 aa7.41□□□□□ -1.22
CHD1L-202ENST00000369258 IGKV2D-30A0A075B6S6 120 aa7.41□□□□□ -1.22
CHD1L-202ENST00000369258 IGKV2-30P06310 120 aa7.41□□□□□ -1.22
CHD1L-202ENST00000369258 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
CHD1L-202ENST00000369258 C1orf134Q5TEV5 83 aa7.39□□□□□ -1.23
CHD1L-202ENST00000369258 SPINK1P00995 79 aa7.38□□□□□ -1.23
CHD1L-202ENST00000369258 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
CHD1L-202ENST00000369258 KRTAP10-1P60331 282 aa7.32□□□□□ -1.24
CHD1L-202ENST00000369258 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
CHD1L-202ENST00000369258 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
CHD1L-202ENST00000369258 Q8N1X5 172 aa7.31□□□□□ -1.24
CHD1L-202ENST00000369258 UQCR11O14957 56 aa7.3□□□□□ -1.24
CHD1L-202ENST00000369258 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
CHD1L-202ENST00000369258 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
CHD1L-202ENST00000369258 PLA2G1BP04054 148 aaKnown RBP7.27□□□□□ -1.25
CHD1L-202ENST00000369258 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
CHD1L-202ENST00000369258 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
CHD1L-202ENST00000369258 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
CHD1L-202ENST00000369258 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
CHD1L-202ENST00000369258 C9orf92A6NGG3 77 aa7.2□□□□□ -1.26
CHD1L-202ENST00000369258 DYNC1H1Q14204 4646 aaKnown RBP7.18□□□□□ -1.26
CHD1L-202ENST00000369258 SACSQ9NZJ4 4579 aa7.17□□□□□ -1.26
CHD1L-202ENST00000369258 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
CHD1L-202ENST00000369258 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
CHD1L-202ENST00000369258 TYMSOSQ8TAI1 123 aa7.15□□□□□ -1.26
CHD1L-202ENST00000369258 Q6ZSA8 131 aa7.12□□□□□ -1.27
CHD1L-202ENST00000369258 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
CHD1L-202ENST00000369258 HSPG2P98160 4391 aa7.07□□□□□ -1.28
CHD1L-202ENST00000369258 KMT2CQ8NEZ4 4911 aaKnown RBP7.06□□□□□ -1.28
CHD1L-202ENST00000369258 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
CHD1L-202ENST00000369258 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
CHD1L-202ENST00000369258 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.28
CHD1L-202ENST00000369258 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
CHD1L-202ENST00000369258 H0YAA0 97 aa6.99□□□□□ -1.29
CHD1L-202ENST00000369258 LPAP08519 4548 aa6.99□□□□□ -1.29
CHD1L-202ENST00000369258 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
CHD1L-202ENST00000369258 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
CHD1L-202ENST00000369258 A0A1B0GU33 70 aa6.96□□□□□ -1.29
CHD1L-202ENST00000369258 A8MUU9 505 aa6.94□□□□□ -1.3
CHD1L-202ENST00000369258 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
CHD1L-202ENST00000369258 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
CHD1L-202ENST00000369258 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.3
CHD1L-202ENST00000369258 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
CHD1L-202ENST00000369258 K7ERS5 55 aa6.82□□□□□ -1.32
CHD1L-202ENST00000369258 TNXBP22105 4242 aa6.81□□□□□ -1.32
CHD1L-202ENST00000369258 A0A0D9SG42 100 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms