RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CD164Q04900 197 aa5.22□□□□□ -1.57
SNX27-201ENST00000368838 LINC00846Q9NV44 126 aa5.22□□□□□ -1.57
SNX27-201ENST00000368838 A0A1W2PNM2 257 aa5.21□□□□□ -1.58
SNX27-201ENST00000368838 IGFL1Q6UW32 110 aa5.21□□□□□ -1.58
SNX27-201ENST00000368838 C3orf22Q8N5N4 141 aa5.21□□□□□ -1.58
SNX27-201ENST00000368838 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
SNX27-201ENST00000368838 LPAP08519 4548 aa5.21□□□□□ -1.58
SNX27-201ENST00000368838 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
SNX27-201ENST00000368838 KRTAP1-4P0C5Y4 121 aa5.19□□□□□ -1.58
SNX27-201ENST00000368838 CXCL6P80162 114 aa5.18□□□□□ -1.58
SNX27-201ENST00000368838 Q5XG85 94 aa5.18□□□□□ -1.58
SNX27-201ENST00000368838 Q6ZVQ6 151 aa5.17□□□□□ -1.58
SNX27-201ENST00000368838 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
SNX27-201ENST00000368838 SMIM20Q8N5G0 67 aa5.16□□□□□ -1.58
SNX27-201ENST00000368838 RPS29P62273 56 aaKnown RBP5.15□□□□□ -1.59
SNX27-201ENST00000368838 SS18L2Q9UHA2 77 aa5.15□□□□□ -1.59
SNX27-201ENST00000368838 NREPQ16612 68 aa5.14□□□□□ -1.59
SNX27-201ENST00000368838 MT-ATP8P03928 68 aa5.13□□□□□ -1.59
SNX27-201ENST00000368838 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
SNX27-201ENST00000368838 A0A087X002 238 aa5.11□□□□□ -1.59
SNX27-201ENST00000368838 J3KT08 172 aa5.11□□□□□ -1.59
SNX27-201ENST00000368838 MOBPQ13875 183 aa5.11□□□□□ -1.59
SNX27-201ENST00000368838 C9orf153Q5TBE3 101 aa5.11□□□□□ -1.59
SNX27-201ENST00000368838 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
SNX27-201ENST00000368838 LINC00472Q9H8W2 130 aa5.11□□□□□ -1.59
SNX27-201ENST00000368838 A0A087WSZ3 146 aa5.1□□□□□ -1.59
SNX27-201ENST00000368838 IGLV9-49A0A0B4J1Y8 123 aa5.1□□□□□ -1.59
SNX27-201ENST00000368838 KRTAP13-2Q52LG2 175 aa5.1□□□□□ -1.59
SNX27-201ENST00000368838 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
SNX27-201ENST00000368838 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
SNX27-201ENST00000368838 SPINK1P00995 79 aa5.09□□□□□ -1.59
SNX27-201ENST00000368838 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
SNX27-201ENST00000368838 BPY2O14599 106 aa5.08□□□□□ -1.6
SNX27-201ENST00000368838 HIST1H4AP62805 103 aaKnown RBP5.08□□□□□ -1.6
SNX27-201ENST00000368838 ANAPC11Q9NYG5 84 aa5.08□□□□□ -1.6
SNX27-201ENST00000368838 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
SNX27-201ENST00000368838 DSCR10P59022 87 aa5.06□□□□□ -1.6
SNX27-201ENST00000368838 C1orf195Q5TG92 126 aa5.06□□□□□ -1.6
SNX27-201ENST00000368838 PRR4Q16378 134 aa5.05□□□□□ -1.6
SNX27-201ENST00000368838 TYMSOSQ8TAI1 123 aa5.05□□□□□ -1.6
SNX27-201ENST00000368838 Q96NJ1 140 aa5.05□□□□□ -1.6
SNX27-201ENST00000368838 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
SNX27-201ENST00000368838 IGKV3D-7A0A0C4DH55 119 aa5.04□□□□□ -1.6
SNX27-201ENST00000368838 A0A0G2JQZ4 141 aa5.04□□□□□ -1.6
SNX27-201ENST00000368838 A8MWP4 228 aa5.04□□□□□ -1.6
SNX27-201ENST00000368838 IGKV4-1P06312 121 aa5.02□□□□□ -1.61
SNX27-201ENST00000368838 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
SNX27-201ENST00000368838 PRR15Q8IV56 129 aa5.02□□□□□ -1.61
SNX27-201ENST00000368838 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
SNX27-201ENST00000368838 MUC2Q02817 5179 aa5.01□□□□□ -1.61
SNX27-201ENST00000368838 NDUFB1O75438 58 aa5□□□□□ -1.61
SNX27-201ENST00000368838 ATOX1O00244 68 aa4.99□□□□□ -1.61
SNX27-201ENST00000368838 KRTAP5-3Q6L8H2 238 aa4.99□□□□□ -1.61
SNX27-201ENST00000368838 FAM236AA0A1B0GUQ0 79 aa4.98□□□□□ -1.61
SNX27-201ENST00000368838 FAM236BA0A1B0GV22 79 aa4.98□□□□□ -1.61
SNX27-201ENST00000368838 K7EQZ3 153 aa4.98□□□□□ -1.61
SNX27-201ENST00000368838 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
SNX27-201ENST00000368838 A0A087WVE0 104 aa4.97□□□□□ -1.61
SNX27-201ENST00000368838 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
SNX27-201ENST00000368838 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
SNX27-201ENST00000368838 C8orf87E5RJ46 101 aa4.97□□□□□ -1.61
SNX27-201ENST00000368838 HRCT1Q6UXD1 115 aa4.96□□□□□ -1.62
SNX27-201ENST00000368838 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
SNX27-201ENST00000368838 ANAPC13Q9BS18 74 aa4.96□□□□□ -1.62
SNX27-201ENST00000368838 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
SNX27-201ENST00000368838 Q8N9L7 120 aa4.94□□□□□ -1.62
SNX27-201ENST00000368838 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
SNX27-201ENST00000368838 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
SNX27-201ENST00000368838 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
SNX27-201ENST00000368838 OCR1Q9BZK8 76 aa4.93□□□□□ -1.62
SNX27-201ENST00000368838 MUC17Q685J3 4493 aa4.92□□□□□ -1.62
SNX27-201ENST00000368838 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
SNX27-201ENST00000368838 DEFB116Q30KQ4 102 aa4.92□□□□□ -1.62
SNX27-201ENST00000368838 TMEM254Q8TBM7 123 aa4.92□□□□□ -1.62
SNX27-201ENST00000368838 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
SNX27-201ENST00000368838 UQCRQO14949 82 aa4.91□□□□□ -1.62
SNX27-201ENST00000368838 COX7CP15954 63 aa4.91□□□□□ -1.62
SNX27-201ENST00000368838 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
SNX27-201ENST00000368838 FP248Q71RG6 208 aaPredicted RBP4.91□□□□□ -1.62
SNX27-201ENST00000368838 TP53AIP1Q9HCN2 124 aa4.91□□□□□ -1.62
SNX27-201ENST00000368838 hDV103S1A0JD37 113 aa4.9□□□□□ -1.63
SNX27-201ENST00000368838 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
SNX27-201ENST00000368838 MRPL34Q9BQ48 92 aaKnown RBP4.89□□□□□ -1.63
SNX27-201ENST00000368838 FAM236DA0A1B0GTK5 79 aa4.88□□□□□ -1.63
SNX27-201ENST00000368838 FAM236CP0DP71 79 aa4.88□□□□□ -1.63
SNX27-201ENST00000368838 LINC00313P59037 77 aa4.88□□□□□ -1.63
SNX27-201ENST00000368838 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
SNX27-201ENST00000368838 IGHV6-1A0A0B4J1U7 121 aa4.87□□□□□ -1.63
SNX27-201ENST00000368838 H3BPC8 53 aa4.87□□□□□ -1.63
SNX27-201ENST00000368838 KRTAP16-1A8MUX0 517 aa4.86□□□□□ -1.63
SNX27-201ENST00000368838 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
SNX27-201ENST00000368838 IGLV7-46A0A075B6I9 117 aa4.85□□□□□ -1.63
SNX27-201ENST00000368838 KLKP1Q107X0 134 aa4.85□□□□□ -1.63
SNX27-201ENST00000368838 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
SNX27-201ENST00000368838 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.63
SNX27-201ENST00000368838 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
SNX27-201ENST00000368838 NDUFC1O43677 76 aa4.81□□□□□ -1.64
SNX27-201ENST00000368838 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
SNX27-201ENST00000368838 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
SNX27-201ENST00000368838 A8MUU9 505 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms