RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 SACSQ9NZJ4 4579 aa10.25□□□□□ -0.77
LMNA-205ENST00000368299 LRP1BQ9NZR2 4599 aa10.25□□□□□ -0.77
LMNA-205ENST00000368299 SEC61GP60059 68 aa10.24□□□□□ -0.77
LMNA-205ENST00000368299 A0A087X002 238 aa10.24□□□□□ -0.77
LMNA-205ENST00000368299 PRR4Q16378 134 aa10.24□□□□□ -0.77
LMNA-205ENST00000368299 ASB16-AS1Q495Z4 193 aa10.24□□□□□ -0.77
LMNA-205ENST00000368299 C8orf17Q9NRJ1 99 aa10.24□□□□□ -0.77
LMNA-205ENST00000368299 Q1T7F1 81 aa10.23□□□□□ -0.77
LMNA-205ENST00000368299 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
LMNA-205ENST00000368299 IGHV6-1A0A0B4J1U7 121 aa10.22□□□□□ -0.77
LMNA-205ENST00000368299 SPANXA2-OT1Q8N9U9 137 aa10.22□□□□□ -0.77
LMNA-205ENST00000368299 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.78
LMNA-205ENST00000368299 BRK1Q8WUW1 75 aa10.21□□□□□ -0.78
LMNA-205ENST00000368299 A0A1B0GVY2 172 aa10.18□□□□□ -0.78
LMNA-205ENST00000368299 TP53AIP1Q9HCN2 124 aa10.18□□□□□ -0.78
LMNA-205ENST00000368299 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
LMNA-205ENST00000368299 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
LMNA-205ENST00000368299 VPS13BQ7Z7G8 4022 aa10.14□□□□□ -0.79
LMNA-205ENST00000368299 MRPL34Q9BQ48 92 aaKnown RBP10.13□□□□□ -0.79
LMNA-205ENST00000368299 LIMD2Q9BT23 127 aa10.12□□□□□ -0.79
LMNA-205ENST00000368299 C8orf87E5RJ46 101 aa10.1□□□□□ -0.79
LMNA-205ENST00000368299 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
LMNA-205ENST00000368299 V9GYY9 64 aa10.09□□□□□ -0.79
LMNA-205ENST00000368299 NDUFS5O43920 106 aa10.08□□□□□ -0.8
LMNA-205ENST00000368299 NOTCH2NLQ7Z3S9 236 aa10.08□□□□□ -0.8
LMNA-205ENST00000368299 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
LMNA-205ENST00000368299 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
LMNA-205ENST00000368299 C1orf195Q5TG92 126 aa10.07□□□□□ -0.8
LMNA-205ENST00000368299 PSPHP1O15172 72 aa10.05□□□□□ -0.8
LMNA-205ENST00000368299 IGLV7-46A0A075B6I9 117 aa10.05□□□□□ -0.8
LMNA-205ENST00000368299 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
LMNA-205ENST00000368299 SPINK1P00995 79 aa10.04□□□□□ -0.8
LMNA-205ENST00000368299 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
LMNA-205ENST00000368299 RYR2Q92736 4967 aa10.02□□□□□ -0.8
LMNA-205ENST00000368299 LINC00313P59037 77 aa10□□□□□ -0.81
LMNA-205ENST00000368299 A8MUN3 132 aa9.99□□□□□ -0.81
LMNA-205ENST00000368299 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
LMNA-205ENST00000368299 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
LMNA-205ENST00000368299 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
LMNA-205ENST00000368299 SPAG11AQ6PDA7 123 aa9.98□□□□□ -0.81
LMNA-205ENST00000368299 COA5Q86WW8 74 aa9.97□□□□□ -0.81
LMNA-205ENST00000368299 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
LMNA-205ENST00000368299 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
LMNA-205ENST00000368299 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
LMNA-205ENST00000368299 Q5VV11 94 aa9.95□□□□□ -0.82
LMNA-205ENST00000368299 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
LMNA-205ENST00000368299 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
LMNA-205ENST00000368299 LOC101927531A0A1B0GV80 90 aa9.9□□□□□ -0.82
LMNA-205ENST00000368299 KRTAP13-3Q3SY46 172 aa9.89□□□□□ -0.83
LMNA-205ENST00000368299 Q5W150 140 aa9.87□□□□□ -0.83
LMNA-205ENST00000368299 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
LMNA-205ENST00000368299 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
LMNA-205ENST00000368299 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
LMNA-205ENST00000368299 CHKB-CPT1BH3BT56 60 aa9.84□□□□□ -0.83
LMNA-205ENST00000368299 FAT1Q14517 4588 aa9.82□□□□□ -0.84
LMNA-205ENST00000368299 Q75L30 129 aa9.82□□□□□ -0.84
LMNA-205ENST00000368299 HRES1P13985 223 aa9.8□□□□□ -0.84
LMNA-205ENST00000368299 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
LMNA-205ENST00000368299 A8MU10 97 aa9.76□□□□□ -0.85
LMNA-205ENST00000368299 A6NED7 52 aa9.71□□□□□ -0.86
LMNA-205ENST00000368299 IGKV2-30P06310 120 aa9.71□□□□□ -0.86
LMNA-205ENST00000368299 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
LMNA-205ENST00000368299 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
LMNA-205ENST00000368299 PMAIP1Q13794 54 aa9.69□□□□□ -0.86
LMNA-205ENST00000368299 Q5VSD8 79 aa9.69□□□□□ -0.86
LMNA-205ENST00000368299 LCA10Q71F78 164 aa9.69□□□□□ -0.86
LMNA-205ENST00000368299 ACYP2P14621 99 aa9.65□□□□□ -0.86
LMNA-205ENST00000368299 RYR3Q15413 4870 aa9.64□□□□□ -0.87
LMNA-205ENST00000368299 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
LMNA-205ENST00000368299 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
LMNA-205ENST00000368299 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
LMNA-205ENST00000368299 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
LMNA-205ENST00000368299 IGKV2D-30A0A075B6S6 120 aa9.59□□□□□ -0.87
LMNA-205ENST00000368299 C20orf166-AS1Q96NR2 134 aa9.59□□□□□ -0.87
LMNA-205ENST00000368299 SPTSSBQ8NFR3 76 aa9.58□□□□□ -0.88
LMNA-205ENST00000368299 Q8N1X5 172 aa9.58□□□□□ -0.88
LMNA-205ENST00000368299 HSPG2P98160 4391 aa9.58□□□□□ -0.88
LMNA-205ENST00000368299 C9orf92A6NGG3 77 aa9.57□□□□□ -0.88
LMNA-205ENST00000368299 A8MUU9 505 aa9.57□□□□□ -0.88
LMNA-205ENST00000368299 SPINK7P58062 85 aa9.56□□□□□ -0.88
LMNA-205ENST00000368299 RYR1P21817 5038 aa9.55□□□□□ -0.88
LMNA-205ENST00000368299 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
LMNA-205ENST00000368299 FLG2Q5D862 2391 aaPredicted RBP9.53□□□□□ -0.88
LMNA-205ENST00000368299 A6NN06 94 aa9.49□□□□□ -0.89
LMNA-205ENST00000368299 KTN1-AS1Q86SY8 53 aa9.47□□□□□ -0.89
LMNA-205ENST00000368299 TNXBP22105 4242 aa9.47□□□□□ -0.89
LMNA-205ENST00000368299 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
LMNA-205ENST00000368299 KRTAP17-1Q9BYP8 105 aa9.44□□□□□ -0.9
LMNA-205ENST00000368299 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
LMNA-205ENST00000368299 A0A1B0GU69 56 aa9.4□□□□□ -0.9
LMNA-205ENST00000368299 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
LMNA-205ENST00000368299 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
LMNA-205ENST00000368299 H3BS24 57 aa9.33□□□□□ -0.92
LMNA-205ENST00000368299 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
LMNA-205ENST00000368299 EPPK1P58107 5090 aaKnown RBP9.28□□□□□ -0.92
LMNA-205ENST00000368299 SPATA8Q6RVD6 105 aa9.28□□□□□ -0.92
LMNA-205ENST00000368299 RPL37P61927 97 aaKnown RBP9.27□□□□□ -0.93
LMNA-205ENST00000368299 UQCR11O14957 56 aa9.25□□□□□ -0.93
LMNA-205ENST00000368299 XP32Q5T750 250 aa9.24□□□□□ -0.93
LMNA-205ENST00000368299 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms