RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
CTSD-202ENST00000367196 A0A1B0GV72 72 aa7.52□□□□□ -1.21
CTSD-202ENST00000367196 CCKP06307 115 aa7.52□□□□□ -1.21
CTSD-202ENST00000367196 RBM12B-AS1Q9P1G2 102 aa7.52□□□□□ -1.21
CTSD-202ENST00000367196 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
CTSD-202ENST00000367196 C9JAW5 83 aa7.5□□□□□ -1.21
CTSD-202ENST00000367196 UBE2V1Q13404 147 aa7.49□□□□□ -1.21
CTSD-202ENST00000367196 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
CTSD-202ENST00000367196 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
CTSD-202ENST00000367196 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
CTSD-202ENST00000367196 C8orf87E5RJ46 101 aa7.46□□□□□ -1.22
CTSD-202ENST00000367196 C21orf62-AS1Q17RA5 79 aa7.46□□□□□ -1.22
CTSD-202ENST00000367196 DEFB116Q30KQ4 102 aa7.46□□□□□ -1.22
CTSD-202ENST00000367196 MTURNQ8N3F0 131 aa7.46□□□□□ -1.22
CTSD-202ENST00000367196 H3BT86 120 aa7.45□□□□□ -1.22
CTSD-202ENST00000367196 BAALC-AS2P0C853 105 aa7.45□□□□□ -1.22
CTSD-202ENST00000367196 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
CTSD-202ENST00000367196 VPS25Q9BRG1 176 aa7.45□□□□□ -1.22
CTSD-202ENST00000367196 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
CTSD-202ENST00000367196 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
CTSD-202ENST00000367196 F8W1H4 67 aa7.43□□□□□ -1.22
CTSD-202ENST00000367196 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
CTSD-202ENST00000367196 J3KT08 172 aa7.42□□□□□ -1.22
CTSD-202ENST00000367196 HRES1P13985 223 aa7.42□□□□□ -1.22
CTSD-202ENST00000367196 MPLKIPQ8TAP9 179 aa7.42□□□□□ -1.22
CTSD-202ENST00000367196 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
CTSD-202ENST00000367196 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
CTSD-202ENST00000367196 NDUFB1O75438 58 aa7.37□□□□□ -1.23
CTSD-202ENST00000367196 MT2AP02795 61 aa7.37□□□□□ -1.23
CTSD-202ENST00000367196 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
CTSD-202ENST00000367196 JMJD7-PLA2G4BH0Y9G9 81 aa7.35□□□□□ -1.23
CTSD-202ENST00000367196 USH2AO75445 5202 aa7.33□□□□□ -1.24
CTSD-202ENST00000367196 ETDBQ3ZM63 59 aa7.33□□□□□ -1.24
CTSD-202ENST00000367196 A0A1B0GW54 56 aa7.32□□□□□ -1.24
CTSD-202ENST00000367196 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
CTSD-202ENST00000367196 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
CTSD-202ENST00000367196 Q6ZQT0 140 aa7.32□□□□□ -1.24
CTSD-202ENST00000367196 MT1FP04733 61 aa7.31□□□□□ -1.24
CTSD-202ENST00000367196 SSPOA2VEC9 5147 aa7.31□□□□□ -1.24
CTSD-202ENST00000367196 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
CTSD-202ENST00000367196 SPINK7P58062 85 aa7.3□□□□□ -1.24
CTSD-202ENST00000367196 Q8N9P0 234 aaPredicted RBP7.29□□□□□ -1.24
CTSD-202ENST00000367196 PDE6GP18545 87 aa7.28□□□□□ -1.24
CTSD-202ENST00000367196 C14orf132Q9NPU4 83 aa7.28□□□□□ -1.24
CTSD-202ENST00000367196 A8MWP4 228 aa7.27□□□□□ -1.25
CTSD-202ENST00000367196 LOC110117498A0A087WWA1 95 aa7.26□□□□□ -1.25
CTSD-202ENST00000367196 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
CTSD-202ENST00000367196 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
CTSD-202ENST00000367196 LCE2BO14633 110 aa7.24□□□□□ -1.25
CTSD-202ENST00000367196 WFDC13Q8IUB5 93 aa7.23□□□□□ -1.25
CTSD-202ENST00000367196 Q6ZVQ6 151 aa7.21□□□□□ -1.26
CTSD-202ENST00000367196 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
CTSD-202ENST00000367196 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
CTSD-202ENST00000367196 J3QR89 54 aa7.2□□□□□ -1.26
CTSD-202ENST00000367196 K7ERU9 68 aa7.2□□□□□ -1.26
CTSD-202ENST00000367196 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
CTSD-202ENST00000367196 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
CTSD-202ENST00000367196 NREPQ16612 68 aa7.17□□□□□ -1.26
CTSD-202ENST00000367196 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
CTSD-202ENST00000367196 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.26
CTSD-202ENST00000367196 FAM240AA0A1B0GVK7 77 aa7.14□□□□□ -1.27
CTSD-202ENST00000367196 ACYP1P07311 99 aa7.14□□□□□ -1.27
CTSD-202ENST00000367196 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
CTSD-202ENST00000367196 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
CTSD-202ENST00000367196 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
CTSD-202ENST00000367196 NDUFS5O43920 106 aa7.1□□□□□ -1.27
CTSD-202ENST00000367196 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
CTSD-202ENST00000367196 UBL5Q9BZL1 73 aa7.09□□□□□ -1.27
CTSD-202ENST00000367196 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
CTSD-202ENST00000367196 K7EQZ3 153 aa7.06□□□□□ -1.28
CTSD-202ENST00000367196 KRTAP19-6Q3LI70 58 aa7.06□□□□□ -1.28
CTSD-202ENST00000367196 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
CTSD-202ENST00000367196 BPY2O14599 106 aa7.03□□□□□ -1.28
CTSD-202ENST00000367196 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
CTSD-202ENST00000367196 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
CTSD-202ENST00000367196 LINC00643Q86TS7 51 aa7□□□□□ -1.29
CTSD-202ENST00000367196 ATP5EP2Q5VTU8 51 aa6.99□□□□□ -1.29
CTSD-202ENST00000367196 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.3
CTSD-202ENST00000367196 CXCL6P80162 114 aa6.96□□□□□ -1.3
CTSD-202ENST00000367196 CASC2Q6XLA1 102 aa6.96□□□□□ -1.3
CTSD-202ENST00000367196 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
CTSD-202ENST00000367196 Q5W150 140 aa6.94□□□□□ -1.3
CTSD-202ENST00000367196 Q8N9L7 120 aa6.9□□□□□ -1.3
CTSD-202ENST00000367196 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
CTSD-202ENST00000367196 MT-ATP8P03928 68 aa6.87□□□□□ -1.31
CTSD-202ENST00000367196 HIST1H4AP62805 103 aaKnown RBP6.87□□□□□ -1.31
CTSD-202ENST00000367196 FAM236AA0A1B0GUQ0 79 aa6.84□□□□□ -1.31
CTSD-202ENST00000367196 FAM236BA0A1B0GV22 79 aa6.84□□□□□ -1.31
CTSD-202ENST00000367196 SCGB1A1P11684 91 aa6.84□□□□□ -1.31
CTSD-202ENST00000367196 IMUPQ9GZP8 106 aa6.84□□□□□ -1.31
CTSD-202ENST00000367196 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
CTSD-202ENST00000367196 C5orf47Q569G3 176 aa6.82□□□□□ -1.32
CTSD-202ENST00000367196 S4R3F8 94 aa6.81□□□□□ -1.32
CTSD-202ENST00000367196 A0A087WVE0 104 aa6.8□□□□□ -1.32
CTSD-202ENST00000367196 PCP4P48539 62 aa6.8□□□□□ -1.32
CTSD-202ENST00000367196 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
CTSD-202ENST00000367196 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
CTSD-202ENST00000367196 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
CTSD-202ENST00000367196 Q5VV11 94 aa6.74□□□□□ -1.33
CTSD-202ENST00000367196 A6NN06 94 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms