RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
H3F3A-202ENST00000366814 NDUFC1O43677 76 aa6.47□□□□□ -1.37
H3F3A-202ENST00000366814 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
H3F3A-202ENST00000366814 CD164Q04900 197 aa6.46□□□□□ -1.38
H3F3A-202ENST00000366814 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
H3F3A-202ENST00000366814 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
H3F3A-202ENST00000366814 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
H3F3A-202ENST00000366814 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
H3F3A-202ENST00000366814 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
H3F3A-202ENST00000366814 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
H3F3A-202ENST00000366814 CASC2Q6XLA1 102 aa6.44□□□□□ -1.38
H3F3A-202ENST00000366814 SNURFQ9Y675 71 aa6.44□□□□□ -1.38
H3F3A-202ENST00000366814 C5orf47Q569G3 176 aa6.43□□□□□ -1.38
H3F3A-202ENST00000366814 Q96NJ1 140 aa6.43□□□□□ -1.38
H3F3A-202ENST00000366814 A0A0U1RQV1 116 aa6.4□□□□□ -1.39
H3F3A-202ENST00000366814 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.39
H3F3A-202ENST00000366814 H7BZZ5 65 aa6.4□□□□□ -1.39
H3F3A-202ENST00000366814 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
H3F3A-202ENST00000366814 KRTAP10-4P60372 401 aaPredicted RBP6.39□□□□□ -1.39
H3F3A-202ENST00000366814 FAM236DA0A1B0GTK5 79 aa6.39□□□□□ -1.39
H3F3A-202ENST00000366814 A0A1B0GVX0 72 aa6.39□□□□□ -1.39
H3F3A-202ENST00000366814 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
H3F3A-202ENST00000366814 FAM236CP0DP71 79 aa6.39□□□□□ -1.39
H3F3A-202ENST00000366814 MMP24-AS1A0A0U1RRL7 71 aa6.38□□□□□ -1.39
H3F3A-202ENST00000366814 MP68P56378 58 aa6.38□□□□□ -1.39
H3F3A-202ENST00000366814 ATP5EP56381 51 aaPredicted RBP6.37□□□□□ -1.39
H3F3A-202ENST00000366814 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
H3F3A-202ENST00000366814 A0A087X002 238 aa6.36□□□□□ -1.39
H3F3A-202ENST00000366814 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
H3F3A-202ENST00000366814 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
H3F3A-202ENST00000366814 C8orf17Q9NRJ1 99 aa6.36□□□□□ -1.39
H3F3A-202ENST00000366814 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
H3F3A-202ENST00000366814 KRTAP13-2Q52LG2 175 aa6.35□□□□□ -1.39
H3F3A-202ENST00000366814 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
H3F3A-202ENST00000366814 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
H3F3A-202ENST00000366814 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
H3F3A-202ENST00000366814 H3BPC8 53 aa6.34□□□□□ -1.39
H3F3A-202ENST00000366814 KRTAP1-4P0C5Y4 121 aa6.34□□□□□ -1.39
H3F3A-202ENST00000366814 MYCBP2O75592 4640 aa6.33□□□□□ -1.4
H3F3A-202ENST00000366814 Q5XG85 94 aa6.33□□□□□ -1.4
H3F3A-202ENST00000366814 OXTP01178 125 aa6.32□□□□□ -1.4
H3F3A-202ENST00000366814 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
H3F3A-202ENST00000366814 H0Y9P7 68 aa6.32□□□□□ -1.4
H3F3A-202ENST00000366814 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
H3F3A-202ENST00000366814 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
H3F3A-202ENST00000366814 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
H3F3A-202ENST00000366814 NDUFS5O43920 106 aa6.3□□□□□ -1.4
H3F3A-202ENST00000366814 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
H3F3A-202ENST00000366814 LINC00208Q96KT6 92 aa6.29□□□□□ -1.4
H3F3A-202ENST00000366814 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
H3F3A-202ENST00000366814 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
H3F3A-202ENST00000366814 SPINK1P00995 79 aa6.28□□□□□ -1.4
H3F3A-202ENST00000366814 HERC1Q15751 4861 aa6.28□□□□□ -1.4
H3F3A-202ENST00000366814 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
H3F3A-202ENST00000366814 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
H3F3A-202ENST00000366814 C1orf195Q5TG92 126 aa6.26□□□□□ -1.41
H3F3A-202ENST00000366814 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
H3F3A-202ENST00000366814 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
H3F3A-202ENST00000366814 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
H3F3A-202ENST00000366814 LINC00313P59037 77 aa6.24□□□□□ -1.41
H3F3A-202ENST00000366814 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
H3F3A-202ENST00000366814 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
H3F3A-202ENST00000366814 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
H3F3A-202ENST00000366814 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
H3F3A-202ENST00000366814 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
H3F3A-202ENST00000366814 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
H3F3A-202ENST00000366814 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
H3F3A-202ENST00000366814 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
H3F3A-202ENST00000366814 CYP4F30PQ9H0H9 118 aa6.17□□□□□ -1.42
H3F3A-202ENST00000366814 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
H3F3A-202ENST00000366814 LOC101927531A0A1B0GV80 90 aa6.16□□□□□ -1.42
H3F3A-202ENST00000366814 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.42
H3F3A-202ENST00000366814 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
H3F3A-202ENST00000366814 KRTAP4-12Q9BQ66 201 aa6.14□□□□□ -1.43
H3F3A-202ENST00000366814 PRR4Q16378 134 aa6.13□□□□□ -1.43
H3F3A-202ENST00000366814 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
H3F3A-202ENST00000366814 PCOTHQ58A44 107 aa6.12□□□□□ -1.43
H3F3A-202ENST00000366814 IGLV7-46A0A075B6I9 117 aa6.11□□□□□ -1.43
H3F3A-202ENST00000366814 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
H3F3A-202ENST00000366814 Q5W150 140 aa6.1□□□□□ -1.43
H3F3A-202ENST00000366814 KRTAP13-3Q3SY46 172 aa6.09□□□□□ -1.43
H3F3A-202ENST00000366814 PRO0628Q9UI54 55 aa6.08□□□□□ -1.44
H3F3A-202ENST00000366814 TNXBP22105 4242 aa6.08□□□□□ -1.44
H3F3A-202ENST00000366814 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
H3F3A-202ENST00000366814 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
H3F3A-202ENST00000366814 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
H3F3A-202ENST00000366814 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
H3F3A-202ENST00000366814 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
H3F3A-202ENST00000366814 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
H3F3A-202ENST00000366814 IGKV2-30P06310 120 aa6.02□□□□□ -1.44
H3F3A-202ENST00000366814 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
H3F3A-202ENST00000366814 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
H3F3A-202ENST00000366814 MPLKIPQ8TAP9 179 aa6.01□□□□□ -1.45
H3F3A-202ENST00000366814 COA5Q86WW8 74 aa6□□□□□ -1.45
H3F3A-202ENST00000366814 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
H3F3A-202ENST00000366814 V9GYY9 64 aa6□□□□□ -1.45
H3F3A-202ENST00000366814 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
H3F3A-202ENST00000366814 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
H3F3A-202ENST00000366814 HRES1P13985 223 aa5.98□□□□□ -1.45
H3F3A-202ENST00000366814 Q1T7F1 81 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms