RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ADM2Q7Z4H4 148 aa3.21□□□□□ -1.9
CDC42BPA-204ENST00000366767 TEP1Q99973 2627 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-204ENST00000366767 CRYBG3Q68DQ2 2970 aa3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 KRTAP13-1Q8IUC0 172 aa3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 UTP20O75691 2785 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 ZFHX3Q15911 3703 aa3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 SMG1Q96Q15 3661 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-204ENST00000366767 S4R3F8 94 aa3.19□□□□□ -1.9
CDC42BPA-204ENST00000366767 NOTCH1P46531 2555 aa3.18□□□□□ -1.9
CDC42BPA-204ENST00000366767 A8MU10 97 aa3.17□□□□□ -1.9
CDC42BPA-204ENST00000366767 SETXQ7Z333 2677 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-204ENST00000366767 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-204ENST00000366767 KRTAP11-1Q8IUC1 163 aa3.16□□□□□ -1.9
CDC42BPA-204ENST00000366767 MUC3AQ02505 3323 aa3.16□□□□□ -1.9
CDC42BPA-204ENST00000366767 HRNRQ86YZ3 2850 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-204ENST00000366767 PANO1I0J062 215 aa3.16□□□□□ -1.9
CDC42BPA-204ENST00000366767 A0A087X002 238 aa3.16□□□□□ -1.9
CDC42BPA-204ENST00000366767 FLNBO75369 2602 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-204ENST00000366767 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-204ENST00000366767 SVEP1Q4LDE5 3571 aa3.14□□□□□ -1.91
CDC42BPA-204ENST00000366767 STAB2Q8WWQ8 2551 aa3.14□□□□□ -1.91
CDC42BPA-204ENST00000366767 UBR5O95071 2799 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-204ENST00000366767 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-204ENST00000366767 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-204ENST00000366767 IGSF10Q6WRI0 2623 aa3.11□□□□□ -1.91
CDC42BPA-204ENST00000366767 CUBNO60494 3623 aa3.1□□□□□ -1.91
CDC42BPA-204ENST00000366767 VPS13CQ709C8 3753 aa3.1□□□□□ -1.91
CDC42BPA-204ENST00000366767 A8MUU9 505 aa3.1□□□□□ -1.91
CDC42BPA-204ENST00000366767 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
CDC42BPA-204ENST00000366767 CELSR1Q9NYQ6 3014 aa3.09□□□□□ -1.91
CDC42BPA-204ENST00000366767 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
CDC42BPA-204ENST00000366767 CELSR2Q9HCU4 2923 aa3.09□□□□□ -1.91
CDC42BPA-204ENST00000366767 Q6ZSA8 131 aa3.09□□□□□ -1.91
CDC42BPA-204ENST00000366767 R4GN34 69 aa3.09□□□□□ -1.91
CDC42BPA-204ENST00000366767 KRTAP10-2P60368 255 aa3.08□□□□□ -1.92
CDC42BPA-204ENST00000366767 KRTAP3-3Q9BYR6 98 aa3.08□□□□□ -1.92
CDC42BPA-204ENST00000366767 KRTAP3-2Q9BYR7 98 aa3.08□□□□□ -1.92
CDC42BPA-204ENST00000366767 FBN2P35556 2912 aa3.07□□□□□ -1.92
CDC42BPA-204ENST00000366767 Q5VSD8 79 aa3.07□□□□□ -1.92
CDC42BPA-204ENST00000366767 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
CDC42BPA-204ENST00000366767 CSMD2Q7Z408 3487 aa3.06□□□□□ -1.92
CDC42BPA-204ENST00000366767 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
CDC42BPA-204ENST00000366767 M0QZ58 72 aa3.06□□□□□ -1.92
CDC42BPA-204ENST00000366767 DCHS2Q6V1P9 2916 aa3.05□□□□□ -1.92
CDC42BPA-204ENST00000366767 KRTAP21-3Q3LHN1 58 aa3.04□□□□□ -1.92
CDC42BPA-204ENST00000366767 KRTAP13-2Q52LG2 175 aa3.03□□□□□ -1.92
CDC42BPA-204ENST00000366767 AKAP9Q99996 3911 aa3.03□□□□□ -1.92
CDC42BPA-204ENST00000366767 NF1P21359 2839 aa3.03□□□□□ -1.93
CDC42BPA-204ENST00000366767 HIVEP1P15822 2718 aa3.02□□□□□ -1.93
CDC42BPA-204ENST00000366767 ZANQ9Y493 2812 aa3.01□□□□□ -1.93
CDC42BPA-204ENST00000366767 FLNCQ14315 2725 aa3.01□□□□□ -1.93
CDC42BPA-204ENST00000366767 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-204ENST00000366767 LCE2DQ5TA82 110 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-204ENST00000366767 NIPBLQ6KC79 2804 aaeCLIP2.99□□□□□ -1.932e-6■■■■□ 21.6
CDC42BPA-204ENST00000366767 C10orf95Q9H7T3 257 aa2.97□□□□□ -1.93
CDC42BPA-204ENST00000366767 KRTAP1-4P0C5Y4 121 aa2.97□□□□□ -1.93
CDC42BPA-204ENST00000366767 MXRA5Q9NR99 2828 aa2.96□□□□□ -1.93
CDC42BPA-204ENST00000366767 PDZD2O15018 2839 aa2.96□□□□□ -1.94
CDC42BPA-204ENST00000366767 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
CDC42BPA-204ENST00000366767 TENM1Q9UKZ4 2725 aa2.92□□□□□ -1.94
CDC42BPA-204ENST00000366767 DNAH9Q9NYC9 4486 aa2.91□□□□□ -1.94
CDC42BPA-204ENST00000366767 P0C880 135 aa2.91□□□□□ -1.94
CDC42BPA-204ENST00000366767 H0YAA0 97 aa2.9□□□□□ -1.94
CDC42BPA-204ENST00000366767 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
CDC42BPA-204ENST00000366767 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
CDC42BPA-204ENST00000366767 TNP1P09430 55 aa2.88□□□□□ -1.95
CDC42BPA-204ENST00000366767 TRRAPQ9Y4A5 3859 aa2.87□□□□□ -1.95
CDC42BPA-204ENST00000366767 TGP01266 2768 aa2.86□□□□□ -1.95
CDC42BPA-204ENST00000366767 DNAH17Q9UFH2 4485 aa2.85□□□□□ -1.95
CDC42BPA-204ENST00000366767 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
CDC42BPA-204ENST00000366767 CSMD3Q7Z407 3707 aa2.85□□□□□ -1.95
CDC42BPA-204ENST00000366767 SRRM2Q9UQ35 2752 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-204ENST00000366767 ZNF469Q96JG9 3925 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-204ENST00000366767 VPS13DQ5THJ4 4388 aa2.84□□□□□ -1.96
CDC42BPA-204ENST00000366767 A0A1B0GVY2 172 aa2.82□□□□□ -1.96
CDC42BPA-204ENST00000366767 KRTAP10-8P60410 259 aa2.82□□□□□ -1.96
CDC42BPA-204ENST00000366767 OTOGQ6ZRI0 2925 aa2.8□□□□□ -1.96
CDC42BPA-204ENST00000366767 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-204ENST00000366767 XP32Q5T750 250 aa2.79□□□□□ -1.96
CDC42BPA-204ENST00000366767 TENM4Q6N022 2769 aa2.78□□□□□ -1.96
CDC42BPA-204ENST00000366767 ALMS1Q8TCU4 4167 aa2.78□□□□□ -1.96
CDC42BPA-204ENST00000366767 TENM2Q9NT68 2774 aa2.78□□□□□ -1.96
CDC42BPA-204ENST00000366767 DYNC2H1Q8NCM8 4307 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-204ENST00000366767 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.96
CDC42BPA-204ENST00000366767 TENM3Q9P273 2699 aa2.77□□□□□ -1.97
CDC42BPA-204ENST00000366767 VWFP04275 2813 aa2.77□□□□□ -1.97
CDC42BPA-204ENST00000366767 FBN1P35555 2871 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-204ENST00000366767 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
CDC42BPA-204ENST00000366767 PKD1L1Q8TDX9 2849 aa2.76□□□□□ -1.97
CDC42BPA-204ENST00000366767 DNAH2Q9P225 4427 aa2.75□□□□□ -1.97
CDC42BPA-204ENST00000366767 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
CDC42BPA-204ENST00000366767 DNAH3Q8TD57 4116 aa2.74□□□□□ -1.97
CDC42BPA-204ENST00000366767 DNAH11Q96DT5 4516 aa2.73□□□□□ -1.97
CDC42BPA-204ENST00000366767 KRTAP3-1Q9BYR8 98 aa2.73□□□□□ -1.97
CDC42BPA-204ENST00000366767 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.97
CDC42BPA-204ENST00000366767 DNAH6Q9C0G6 4158 aa2.69□□□□□ -1.98
CDC42BPA-204ENST00000366767 CMYA5Q8N3K9 4069 aa2.69□□□□□ -1.98
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