RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 A0A087X002 238 aa6.94□□□□□ -1.3
CDC42BPA-202ENST00000366764 A0A0D9SG42 100 aa6.94□□□□□ -1.3
CDC42BPA-202ENST00000366764 KRTAP13-1Q8IUC0 172 aa6.93□□□□□ -1.3
CDC42BPA-202ENST00000366764 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-202ENST00000366764 TENM2Q9NT68 2774 aa6.92□□□□□ -1.3
CDC42BPA-202ENST00000366764 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
CDC42BPA-202ENST00000366764 KRTAP7-1Q8IUC3 87 aa6.91□□□□□ -1.3
CDC42BPA-202ENST00000366764 A6NN06 94 aa6.91□□□□□ -1.3
CDC42BPA-202ENST00000366764 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
CDC42BPA-202ENST00000366764 PKD1L1Q8TDX9 2849 aa6.9□□□□□ -1.3
CDC42BPA-202ENST00000366764 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-202ENST00000366764 PANO1I0J062 215 aa6.87□□□□□ -1.31
CDC42BPA-202ENST00000366764 FBN1P35555 2871 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-202ENST00000366764 S4R3F8 94 aa6.86□□□□□ -1.31
CDC42BPA-202ENST00000366764 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
CDC42BPA-202ENST00000366764 WDFY3Q8IZQ1 3526 aa6.85□□□□□ -1.31
CDC42BPA-202ENST00000366764 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
CDC42BPA-202ENST00000366764 LUZP6Q538Z0 58 aa6.85□□□□□ -1.31
CDC42BPA-202ENST00000366764 RPL37P61927 97 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-202ENST00000366764 Q6ZSA8 131 aa6.84□□□□□ -1.32
CDC42BPA-202ENST00000366764 J3QL48 77 aa6.83□□□□□ -1.32
CDC42BPA-202ENST00000366764 ROMO1P60602 79 aa6.82□□□□□ -1.32
CDC42BPA-202ENST00000366764 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
CDC42BPA-202ENST00000366764 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
CDC42BPA-202ENST00000366764 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
CDC42BPA-202ENST00000366764 H3BS24 57 aa6.77□□□□□ -1.32
CDC42BPA-202ENST00000366764 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
CDC42BPA-202ENST00000366764 LAMA5O15230 3695 aa6.7□□□□□ -1.34
CDC42BPA-202ENST00000366764 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
CDC42BPA-202ENST00000366764 R4GN34 69 aa6.67□□□□□ -1.34
CDC42BPA-202ENST00000366764 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
CDC42BPA-202ENST00000366764 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
CDC42BPA-202ENST00000366764 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-202ENST00000366764 SRRM2Q9UQ35 2752 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-202ENST00000366764 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
CDC42BPA-202ENST00000366764 DCHS1Q96JQ0 3298 aa6.63□□□□□ -1.35
CDC42BPA-202ENST00000366764 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-202ENST00000366764 M0QZ58 72 aa6.6□□□□□ -1.35
CDC42BPA-202ENST00000366764 A8MUU9 505 aa6.6□□□□□ -1.35
CDC42BPA-202ENST00000366764 A8MU10 97 aa6.59□□□□□ -1.35
CDC42BPA-202ENST00000366764 Q5VSD8 79 aa6.59□□□□□ -1.35
CDC42BPA-202ENST00000366764 A0A0A0MQY5 61 aa6.59□□□□□ -1.36
CDC42BPA-202ENST00000366764 RELNP78509 3460 aa6.58□□□□□ -1.36
CDC42BPA-202ENST00000366764 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
CDC42BPA-202ENST00000366764 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
CDC42BPA-202ENST00000366764 DMDP11532 3685 aa6.56□□□□□ -1.36
CDC42BPA-202ENST00000366764 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
CDC42BPA-202ENST00000366764 COL7A1Q02388 2944 aa6.56□□□□□ -1.36
CDC42BPA-202ENST00000366764 ZFHX4Q86UP3 3567 aa6.54□□□□□ -1.36
CDC42BPA-202ENST00000366764 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
CDC42BPA-202ENST00000366764 SMG1Q96Q15 3661 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-202ENST00000366764 ASPMQ8IZT6 3477 aa6.45□□□□□ -1.38
CDC42BPA-202ENST00000366764 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
CDC42BPA-202ENST00000366764 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
CDC42BPA-202ENST00000366764 ZFHX3Q15911 3703 aa6.42□□□□□ -1.38
CDC42BPA-202ENST00000366764 CSMD1Q96PZ7 3565 aa6.4□□□□□ -1.39
CDC42BPA-202ENST00000366764 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.39
CDC42BPA-202ENST00000366764 KRTAP16-1A8MUX0 517 aa6.39□□□□□ -1.39
CDC42BPA-202ENST00000366764 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
CDC42BPA-202ENST00000366764 H0YAA0 97 aa6.35□□□□□ -1.39
CDC42BPA-202ENST00000366764 M0R2T5 61 aa6.34□□□□□ -1.39
CDC42BPA-202ENST00000366764 TRRAPQ9Y4A5 3859 aa6.34□□□□□ -1.4
CDC42BPA-202ENST00000366764 MUC3AQ02505 3323 aa6.33□□□□□ -1.4
CDC42BPA-202ENST00000366764 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
CDC42BPA-202ENST00000366764 SVEP1Q4LDE5 3571 aa6.26□□□□□ -1.41
CDC42BPA-202ENST00000366764 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
CDC42BPA-202ENST00000366764 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
CDC42BPA-202ENST00000366764 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
CDC42BPA-202ENST00000366764 XP32Q5T750 250 aa6.2□□□□□ -1.42
CDC42BPA-202ENST00000366764 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
CDC42BPA-202ENST00000366764 TPRXLQ17RH7 258 aa6.15□□□□□ -1.43
CDC42BPA-202ENST00000366764 TNP1P09430 55 aa6.15□□□□□ -1.43
CDC42BPA-202ENST00000366764 AKAP9Q99996 3911 aa6.13□□□□□ -1.43
CDC42BPA-202ENST00000366764 P0C880 135 aa6.11□□□□□ -1.43
CDC42BPA-202ENST00000366764 CUBNO60494 3623 aa6.09□□□□□ -1.44
CDC42BPA-202ENST00000366764 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
CDC42BPA-202ENST00000366764 KRTAP10-8P60410 259 aa5.94□□□□□ -1.46
CDC42BPA-202ENST00000366764 A0A1B0GVY2 172 aa5.91□□□□□ -1.46
CDC42BPA-202ENST00000366764 KRTAP3-1Q9BYR8 98 aa5.86□□□□□ -1.47
CDC42BPA-202ENST00000366764 CSMD2Q7Z408 3487 aa5.86□□□□□ -1.47
CDC42BPA-202ENST00000366764 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
CDC42BPA-202ENST00000366764 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
CDC42BPA-202ENST00000366764 ZNF469Q96JG9 3925 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-202ENST00000366764 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
CDC42BPA-202ENST00000366764 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-202ENST00000366764 ANK3Q12955 4377 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-202ENST00000366764 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
CDC42BPA-202ENST00000366764 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
CDC42BPA-202ENST00000366764 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
CDC42BPA-202ENST00000366764 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
CDC42BPA-202ENST00000366764 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
CDC42BPA-202ENST00000366764 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CDC42BPA-202ENST00000366764 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-202ENST00000366764 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
CDC42BPA-202ENST00000366764 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
CDC42BPA-202ENST00000366764 HECTD4Q9Y4D8 3996 aa5.45□□□□□ -1.54
CDC42BPA-202ENST00000366764 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
CDC42BPA-202ENST00000366764 HUWE1Q7Z6Z7 4374 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-202ENST00000366764 DNAH3Q8TD57 4116 aa5.39□□□□□ -1.55
CDC42BPA-202ENST00000366764 LYSTQ99698 3801 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 1552.8 ms