RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 DNAH8Q96JB1 4490 aa10.32□□□□□ -0.76
TRIM11-202ENST00000366699 MRPL34Q9BQ48 92 aaKnown RBP10.32□□□□□ -0.76
TRIM11-202ENST00000366699 V9GYY9 64 aa10.32□□□□□ -0.76
TRIM11-202ENST00000366699 NDUFS5O43920 106 aa10.31□□□□□ -0.76
TRIM11-202ENST00000366699 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
TRIM11-202ENST00000366699 HYDINQ4G0P3 5121 aa10.3□□□□□ -0.76
TRIM11-202ENST00000366699 Q6ZSA8 131 aa10.3□□□□□ -0.76
TRIM11-202ENST00000366699 DNAH6Q9C0G6 4158 aa10.28□□□□□ -0.76
TRIM11-202ENST00000366699 A8MUN3 132 aa10.28□□□□□ -0.76
TRIM11-202ENST00000366699 KRTAP10-1P60331 282 aa10.25□□□□□ -0.77
TRIM11-202ENST00000366699 PCOTHQ58A44 107 aa10.25□□□□□ -0.77
TRIM11-202ENST00000366699 A0A087X002 238 aa10.25□□□□□ -0.77
TRIM11-202ENST00000366699 NOTCH2NLQ7Z3S9 236 aa10.25□□□□□ -0.77
TRIM11-202ENST00000366699 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
TRIM11-202ENST00000366699 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
TRIM11-202ENST00000366699 DNAH11Q96DT5 4516 aa10.21□□□□□ -0.78
TRIM11-202ENST00000366699 Q5VV11 94 aa10.21□□□□□ -0.78
TRIM11-202ENST00000366699 COA5Q86WW8 74 aa10.21□□□□□ -0.78
TRIM11-202ENST00000366699 ALMS1Q8TCU4 4167 aa10.2□□□□□ -0.78
TRIM11-202ENST00000366699 Q8N9P0 234 aaPredicted RBP10.19□□□□□ -0.78
TRIM11-202ENST00000366699 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
TRIM11-202ENST00000366699 C8orf87E5RJ46 101 aa10.17□□□□□ -0.78
TRIM11-202ENST00000366699 FAT2Q9NYQ8 4349 aa10.16□□□□□ -0.78
TRIM11-202ENST00000366699 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
TRIM11-202ENST00000366699 PRR15LQ9BU68 103 aa10.14□□□□□ -0.79
TRIM11-202ENST00000366699 CHKB-CPT1BH3BT56 60 aa10.14□□□□□ -0.79
TRIM11-202ENST00000366699 A8MU10 97 aa10.13□□□□□ -0.79
TRIM11-202ENST00000366699 PKD1P98161 4303 aa10.13□□□□□ -0.79
TRIM11-202ENST00000366699 PMAIP1Q13794 54 aa10.13□□□□□ -0.79
TRIM11-202ENST00000366699 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
TRIM11-202ENST00000366699 KRTAP13-3Q3SY46 172 aa10.1□□□□□ -0.79
TRIM11-202ENST00000366699 Q5W150 140 aa10.1□□□□□ -0.79
TRIM11-202ENST00000366699 LINC00313P59037 77 aa10.08□□□□□ -0.8
TRIM11-202ENST00000366699 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
TRIM11-202ENST00000366699 SACSQ9NZJ4 4579 aa10.06□□□□□ -0.8
TRIM11-202ENST00000366699 HRES1P13985 223 aa10.05□□□□□ -0.8
TRIM11-202ENST00000366699 SEC61GP60059 68 aa10.04□□□□□ -0.8
TRIM11-202ENST00000366699 C4orf48Q5BLP8 95 aa10.04□□□□□ -0.8
TRIM11-202ENST00000366699 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
TRIM11-202ENST00000366699 Q75L30 129 aa10.03□□□□□ -0.8
TRIM11-202ENST00000366699 LRP1BQ9NZR2 4599 aa10.02□□□□□ -0.81
TRIM11-202ENST00000366699 A6NED7 52 aa10.01□□□□□ -0.81
TRIM11-202ENST00000366699 FAM229AH3BQW9 127 aa10□□□□□ -0.81
TRIM11-202ENST00000366699 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
TRIM11-202ENST00000366699 LINC01558Q9Y6Z2 57 aa9.99□□□□□ -0.81
TRIM11-202ENST00000366699 SPAG11AQ6PDA7 123 aa9.98□□□□□ -0.81
TRIM11-202ENST00000366699 PKHD1P08F94 4074 aa9.98□□□□□ -0.81
TRIM11-202ENST00000366699 SPINK1P00995 79 aa9.98□□□□□ -0.81
TRIM11-202ENST00000366699 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
TRIM11-202ENST00000366699 LCA10Q71F78 164 aa9.97□□□□□ -0.81
TRIM11-202ENST00000366699 ACYP2P14621 99 aa9.94□□□□□ -0.82
TRIM11-202ENST00000366699 KRTAP16-1A8MUX0 517 aa9.91□□□□□ -0.82
TRIM11-202ENST00000366699 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
TRIM11-202ENST00000366699 VPS13BQ7Z7G8 4022 aa9.9□□□□□ -0.82
TRIM11-202ENST00000366699 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
TRIM11-202ENST00000366699 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
TRIM11-202ENST00000366699 DMAC1Q96GE9 116 aa9.89□□□□□ -0.83
TRIM11-202ENST00000366699 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
TRIM11-202ENST00000366699 CDC42SE1Q9NRR8 79 aa9.88□□□□□ -0.83
TRIM11-202ENST00000366699 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
TRIM11-202ENST00000366699 LINC00304Q8N9R0 145 aa9.86□□□□□ -0.83
TRIM11-202ENST00000366699 KTN1-AS1Q86SY8 53 aa9.85□□□□□ -0.83
TRIM11-202ENST00000366699 KMT2CQ8NEZ4 4911 aaKnown RBP9.84□□□□□ -0.83
TRIM11-202ENST00000366699 A0A1B0GVY2 172 aa9.82□□□□□ -0.84
TRIM11-202ENST00000366699 SMR3BP02814 79 aaPredicted RBP9.81□□□□□ -0.84
TRIM11-202ENST00000366699 SPINK7P58062 85 aa9.8□□□□□ -0.84
TRIM11-202ENST00000366699 DYNC1H1Q14204 4646 aaKnown RBP9.8□□□□□ -0.84
TRIM11-202ENST00000366699 A6NN06 94 aa9.8□□□□□ -0.84
TRIM11-202ENST00000366699 RYR2Q92736 4967 aa9.79□□□□□ -0.84
TRIM11-202ENST00000366699 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
TRIM11-202ENST00000366699 KRTAP10-4P60372 401 aaPredicted RBP9.68□□□□□ -0.86
TRIM11-202ENST00000366699 FAT1Q14517 4588 aa9.68□□□□□ -0.86
TRIM11-202ENST00000366699 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
TRIM11-202ENST00000366699 APOBP04114 4563 aaKnown RBP9.67□□□□□ -0.86
TRIM11-202ENST00000366699 C7orf65Q6ZTY9 151 aa9.65□□□□□ -0.86
TRIM11-202ENST00000366699 A0A1B0GU69 56 aa9.64□□□□□ -0.87
TRIM11-202ENST00000366699 RYR3Q15413 4870 aa9.57□□□□□ -0.88
TRIM11-202ENST00000366699 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
TRIM11-202ENST00000366699 A8MUU9 505 aa9.55□□□□□ -0.88
TRIM11-202ENST00000366699 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
TRIM11-202ENST00000366699 Q8N1X5 172 aa9.49□□□□□ -0.89
TRIM11-202ENST00000366699 UQCR11O14957 56 aa9.48□□□□□ -0.89
TRIM11-202ENST00000366699 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
TRIM11-202ENST00000366699 PKHD1L1Q86WI1 4243 aa9.47□□□□□ -0.89
TRIM11-202ENST00000366699 MIR22HGQ0VDD5 57 aa9.43□□□□□ -0.9
TRIM11-202ENST00000366699 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
TRIM11-202ENST00000366699 Q5VSD8 79 aa9.39□□□□□ -0.91
TRIM11-202ENST00000366699 HSPG2P98160 4391 aa9.38□□□□□ -0.91
TRIM11-202ENST00000366699 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
TRIM11-202ENST00000366699 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
TRIM11-202ENST00000366699 LRP1Q07954 4544 aaKnown RBP9.33□□□□□ -0.92
TRIM11-202ENST00000366699 KRTAP3-1Q9BYR8 98 aa9.3□□□□□ -0.92
TRIM11-202ENST00000366699 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
TRIM11-202ENST00000366699 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
TRIM11-202ENST00000366699 RYR1P21817 5038 aa9.28□□□□□ -0.92
TRIM11-202ENST00000366699 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
TRIM11-202ENST00000366699 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
TRIM11-202ENST00000366699 TNXBP22105 4242 aa9.22□□□□□ -0.93
TRIM11-202ENST00000366699 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
TRIM11-202ENST00000366699 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms