RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 ITSN1Q15811 1721 aa-4.89□□□□□ -3.19
RNU4-40P-201ENST00000364351 KRTAP19-2Q3LHN2 52 aa-4.89□□□□□ -3.19
RNU4-40P-201ENST00000364351 DDX60LQ5H9U9 1706 aaKnown RBP-4.89□□□□□ -3.19
RNU4-40P-201ENST00000364351 DOT1LQ8TEK3 1739 aa-4.89□□□□□ -3.19
RNU4-40P-201ENST00000364351 CDH23Q9H251 3354 aa-4.9□□□□□ -3.19
RNU4-40P-201ENST00000364351 MYH4Q9Y623 1939 aa-4.9□□□□□ -3.19
RNU4-40P-201ENST00000364351 NEXMIFQ5QGS0 1516 aa-4.91□□□□□ -3.2
RNU4-40P-201ENST00000364351 MRPL33O75394 65 aaKnown RBP-4.91□□□□□ -3.2
RNU4-40P-201ENST00000364351 C20orf78Q9BR46 151 aa-4.91□□□□□ -3.2
RNU4-40P-201ENST00000364351 KTN1Q86UP2 1357 aaKnown RBP-4.91□□□□□ -3.2
RNU4-40P-201ENST00000364351 UQCRHP07919 91 aa-4.92□□□□□ -3.2
RNU4-40P-201ENST00000364351 PREX2Q70Z35 1606 aa-4.93□□□□□ -3.2
RNU4-40P-201ENST00000364351 LZICQ8WZA0 190 aa-4.93□□□□□ -3.2
RNU4-40P-201ENST00000364351 FAM24AA6NFZ4 105 aa-4.94□□□□□ -3.2
RNU4-40P-201ENST00000364351 CYB5AP00167 134 aa-4.94□□□□□ -3.2
RNU4-40P-201ENST00000364351 KRTDAPP60985 99 aa-4.94□□□□□ -3.2
RNU4-40P-201ENST00000364351 ETDBQ3ZM63 59 aa-4.94□□□□□ -3.2
RNU4-40P-201ENST00000364351 CLASP1Q7Z460 1538 aa-4.94□□□□□ -3.2
RNU4-40P-201ENST00000364351 MAP3K4Q9Y6R4 1608 aa-4.94□□□□□ -3.2
RNU4-40P-201ENST00000364351 FAM25AB3EWG3 89 aa-4.95□□□□□ -3.2
RNU4-40P-201ENST00000364351 FAM25CB3EWG5 89 aa-4.95□□□□□ -3.2
RNU4-40P-201ENST00000364351 FAM25GB3EWG6 89 aa-4.95□□□□□ -3.2
RNU4-40P-201ENST00000364351 RAPGEF2Q9Y4G8 1499 aa-4.95□□□□□ -3.2
RNU4-40P-201ENST00000364351 MPC2O95563 127 aa-4.96□□□□□ -3.2
RNU4-40P-201ENST00000364351 RPL13AP3Q6NVV1 102 aa-4.96□□□□□ -3.2
RNU4-40P-201ENST00000364351 KIF14Q15058 1648 aa-4.97□□□□□ -3.21
RNU4-40P-201ENST00000364351 CC2D2AQ9P2K1 1620 aa-4.97□□□□□ -3.21
RNU4-40P-201ENST00000364351 DIP2BQ9P265 1576 aa-4.98□□□□□ -3.21
RNU4-40P-201ENST00000364351 NDUFA4O00483 81 aa-4.98□□□□□ -3.21
RNU4-40P-201ENST00000364351 IFI27P40305 119 aaPredicted RBP-4.98□□□□□ -3.21
RNU4-40P-201ENST00000364351 PLGLAQ15195 96 aa-4.98□□□□□ -3.21
RNU4-40P-201ENST00000364351 NAIPQ13075 1403 aa-4.98□□□□□ -3.21
RNU4-40P-201ENST00000364351 LTN1O94822 1766 aa-4.99□□□□□ -3.21
RNU4-40P-201ENST00000364351 FOCADQ5VW36 1801 aa-4.99□□□□□ -3.21
RNU4-40P-201ENST00000364351 NDUFB1O75438 58 aa-4.99□□□□□ -3.21
RNU4-40P-201ENST00000364351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-4.99□□□□□ -3.21
RNU4-40P-201ENST00000364351 CRIP1P50238 77 aa-5□□□□□ -3.21
RNU4-40P-201ENST00000364351 ZNF720Q7Z2F6 126 aa-5□□□□□ -3.21
RNU4-40P-201ENST00000364351 ARHGAP5Q13017 1502 aa-5.01□□□□□ -3.21
RNU4-40P-201ENST00000364351 S100A8P05109 93 aa-5.01□□□□□ -3.21
RNU4-40P-201ENST00000364351 PPLO60437 1756 aa-5.01□□□□□ -3.21
RNU4-40P-201ENST00000364351 ROCK2O75116 1388 aaKnown RBP-5.02□□□□□ -3.21
RNU4-40P-201ENST00000364351 NRXN1Q9ULB1 1477 aa-5.02□□□□□ -3.21
RNU4-40P-201ENST00000364351 BRCA2P51587 3418 aa-5.03□□□□□ -3.21
RNU4-40P-201ENST00000364351 UACAQ9BZF9 1416 aa-5.04□□□□□ -3.22
RNU4-40P-201ENST00000364351 NRAPQ86VF7 1730 aa-5.05□□□□□ -3.22
RNU4-40P-201ENST00000364351 PAIP2BQ9ULR5 123 aaKnown RBP-5.05□□□□□ -3.22
RNU4-40P-201ENST00000364351 NRXN3Q9Y4C0 1643 aa-5.05□□□□□ -3.22
RNU4-40P-201ENST00000364351 TJP1Q07157 1748 aa-5.06□□□□□ -3.22
RNU4-40P-201ENST00000364351 MYOM2P54296 1465 aa-5.06□□□□□ -3.22
RNU4-40P-201ENST00000364351 LINC00470Q9BZP3 86 aa-5.06□□□□□ -3.22
RNU4-40P-201ENST00000364351 ABRACLQ9P1F3 81 aa-5.06□□□□□ -3.22
RNU4-40P-201ENST00000364351 XIRP2A4UGR9 3374 aa-5.07□□□□□ -3.22
RNU4-40P-201ENST00000364351 H3BQ15 152 aa-5.07□□□□□ -3.22
RNU4-40P-201ENST00000364351 GNG7O60262 68 aa-5.07□□□□□ -3.22
RNU4-40P-201ENST00000364351 LINC00032P0C843 101 aa-5.07□□□□□ -3.22
RNU4-40P-201ENST00000364351 CCDC88BA6NC98 1476 aa-5.07□□□□□ -3.22
RNU4-40P-201ENST00000364351 VPS13AQ96RL7 3174 aa-5.08□□□□□ -3.22
RNU4-40P-201ENST00000364351 hADV29S1A0JD25 119 aa-5.08□□□□□ -3.22
RNU4-40P-201ENST00000364351 DPY30Q9C005 99 aa-5.08□□□□□ -3.22
RNU4-40P-201ENST00000364351 INO80Q9ULG1 1556 aaPredicted RBP-5.08□□□□□ -3.22
RNU4-40P-201ENST00000364351 POLR2KP53803 58 aaKnown RBP-5.09□□□□□ -3.22
RNU4-40P-201ENST00000364351 SELENOWP63302 87 aa-5.09□□□□□ -3.22
RNU4-40P-201ENST00000364351 FAM107BQ9H098 131 aa-5.09□□□□□ -3.22
RNU4-40P-201ENST00000364351 KAAG1Q9UBP8 84 aa-5.09□□□□□ -3.22
RNU4-40P-201ENST00000364351 RICTORQ6R327 1708 aa-5.09□□□□□ -3.22
RNU4-40P-201ENST00000364351 AKAIN1P0CW23 69 aa-5.12□□□□□ -3.23
RNU4-40P-201ENST00000364351 UMAD1C9J7I0 102 aa-5.13□□□□□ -3.23
RNU4-40P-201ENST00000364351 ATOX1O00244 68 aa-5.13□□□□□ -3.23
RNU4-40P-201ENST00000364351 KCNQ1DNQ9H478 68 aa-5.13□□□□□ -3.23
RNU4-40P-201ENST00000364351 FAM208AQ9UK61 1670 aaKnown RBP-5.13□□□□□ -3.23
RNU4-40P-201ENST00000364351 HFM1A2PYH4 1435 aa-5.14□□□□□ -3.23
RNU4-40P-201ENST00000364351 UBL5Q9BZL1 73 aa-5.14□□□□□ -3.23
RNU4-40P-201ENST00000364351 PYDC1Q8WXC3 89 aa-5.16□□□□□ -3.24
RNU4-40P-201ENST00000364351 ARHGAP35Q9NRY4 1499 aa-5.17□□□□□ -3.24
RNU4-40P-201ENST00000364351 HMGA1P17096 107 aaKnown RBP-5.17□□□□□ -3.24
RNU4-40P-201ENST00000364351 SVBPQ8N300 66 aa-5.17□□□□□ -3.24
RNU4-40P-201ENST00000364351 RNF17Q9BXT8 1623 aaKnown RBP-5.17□□□□□ -3.24
RNU4-40P-201ENST00000364351 ARFGEF2Q9Y6D5 1785 aa-5.17□□□□□ -3.24
RNU4-40P-201ENST00000364351 FANCAO15360 1455 aa-5.18□□□□□ -3.24
RNU4-40P-201ENST00000364351 ABCA3Q99758 1704 aa-5.18□□□□□ -3.24
RNU4-40P-201ENST00000364351 ANKRD26Q9UPS8 1709 aa-5.19□□□□□ -3.24
RNU4-40P-201ENST00000364351 HMGN2P05204 90 aaKnown RBP-5.19□□□□□ -3.24
RNU4-40P-201ENST00000364351 NRKQ7Z2Y5 1582 aa-5.21□□□□□ -3.24
RNU4-40P-201ENST00000364351 MYO5CQ9NQX4 1742 aa-5.22□□□□□ -3.24
RNU4-40P-201ENST00000364351 UQCRHLA0A096LP55 91 aa-5.22□□□□□ -3.25
RNU4-40P-201ENST00000364351 PMCHL2Q9BQD1 86 aa-5.22□□□□□ -3.25
RNU4-40P-201ENST00000364351 RRBP1Q9P2E9 1410 aaKnown RBP-5.23□□□□□ -3.25
RNU4-40P-201ENST00000364351 RBP2P50120 134 aa-5.23□□□□□ -3.25
RNU4-40P-201ENST00000364351 SNAPC5O75971 98 aa-5.24□□□□□ -3.25
RNU4-40P-201ENST00000364351 SARNPP82979 210 aaKnown RBP-5.24□□□□□ -3.25
RNU4-40P-201ENST00000364351 URB2Q14146 1524 aaKnown RBP-5.24□□□□□ -3.25
RNU4-40P-201ENST00000364351 NREPQ16612 68 aa-5.25□□□□□ -3.25
RNU4-40P-201ENST00000364351 ETDCA0A1B0GVM5 59 aa-5.26□□□□□ -3.25
RNU4-40P-201ENST00000364351 GNGT2O14610 69 aa-5.27□□□□□ -3.25
RNU4-40P-201ENST00000364351 SMIM27A0A1W2PRY6 76 aa-5.28□□□□□ -3.25
RNU4-40P-201ENST00000364351 IER3IP1Q9Y5U9 82 aa-5.28□□□□□ -3.25
RNU4-40P-201ENST00000364351 RALGAPBQ86X10 1494 aa-5.28□□□□□ -3.25
RNU4-40P-201ENST00000364351 EPRSP07814 1512 aaKnown RBP-5.28□□□□□ -3.26
RNU4-40P-201ENST00000364351 TTC37Q6PGP7 1564 aa-5.29□□□□□ -3.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms