RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 PKD1P98161 4303 aa0.1□□□□□ -2.39
RNU6-1249P-201ENST00000363237 CREBBPQ92793 2442 aa0.1□□□□□ -2.39
RNU6-1249P-201ENST00000363237 HECTD1Q9ULT8 2610 aa0.1□□□□□ -2.39
RNU6-1249P-201ENST00000363237 LRP2P98164 4655 aa0.08□□□□□ -2.4
RNU6-1249P-201ENST00000363237 VPS13BQ7Z7G8 4022 aa0.08□□□□□ -2.4
RNU6-1249P-201ENST00000363237 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
RNU6-1249P-201ENST00000363237 NOP10Q9NPE3 64 aaKnown RBP0.08□□□□□ -2.4
RNU6-1249P-201ENST00000363237 CMC2Q9NRP2 79 aa0.08□□□□□ -2.4
RNU6-1249P-201ENST00000363237 SPTBN4Q9H254 2564 aa0.08□□□□□ -2.4
RNU6-1249P-201ENST00000363237 KIF21BO75037 1637 aa0.07□□□□□ -2.4
RNU6-1249P-201ENST00000363237 IGLV5-48A0A075B6I7 105 aa0.07□□□□□ -2.4
RNU6-1249P-201ENST00000363237 PKHD1P08F94 4074 aa0.07□□□□□ -2.4
RNU6-1249P-201ENST00000363237 FLNAP21333 2647 aaKnown RBP0.06□□□□□ -2.4
RNU6-1249P-201ENST00000363237 CEP290O15078 2479 aa0.06□□□□□ -2.4
RNU6-1249P-201ENST00000363237 FAM208AQ9UK61 1670 aaKnown RBP0.06□□□□□ -2.4
RNU6-1249P-201ENST00000363237 ABRACLQ9P1F3 81 aa0.06□□□□□ -2.4
RNU6-1249P-201ENST00000363237 DDX60Q8IY21 1712 aaKnown RBP0.06□□□□□ -2.4
RNU6-1249P-201ENST00000363237 IQGAP1P46940 1657 aa0.05□□□□□ -2.4
RNU6-1249P-201ENST00000363237 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
RNU6-1249P-201ENST00000363237 SPRR2EP22531 72 aa0.04□□□□□ -2.4
RNU6-1249P-201ENST00000363237 SVEP1Q4LDE5 3571 aa0.03□□□□□ -2.4
RNU6-1249P-201ENST00000363237 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1249P-201ENST00000363237 TENM2Q9NT68 2774 aa0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 NF1P21359 2839 aa0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 PKD1L2Q7Z442 2459 aa0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 SMIM27A0A1W2PRY6 76 aa0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 SETD2Q9BYW2 2564 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 ZZEF1O43149 2961 aa0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 SONP18583 2426 aaKnown RBP0.01□□□□□ -2.41
RNU6-1249P-201ENST00000363237 SNRPGP15A8MWD9 76 aa0.01□□□□□ -2.41
RNU6-1249P-201ENST00000363237 PKHD1L1Q86WI1 4243 aa0.01□□□□□ -2.41
RNU6-1249P-201ENST00000363237 CUBNO60494 3623 aa0□□□□□ -2.41
RNU6-1249P-201ENST00000363237 MT1AP04731 61 aa0□□□□□ -2.41
RNU6-1249P-201ENST00000363237 MMP24-AS1A0A0U1RRL7 71 aa-0.01□□□□□ -2.41
RNU6-1249P-201ENST00000363237 KAAG1Q9UBP8 84 aa-0.01□□□□□ -2.41
RNU6-1249P-201ENST00000363237 DNAH3Q8TD57 4116 aa-0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 SACSQ9NZJ4 4579 aa-0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 PDZD2O15018 2839 aa-0.02□□□□□ -2.41
RNU6-1249P-201ENST00000363237 MAP1AP78559 2803 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-1249P-201ENST00000363237 STAB1Q9NY15 2570 aa-0.03□□□□□ -2.41
RNU6-1249P-201ENST00000363237 ANK3Q12955 4377 aaKnown RBP-0.03□□□□□ -2.42
RNU6-1249P-201ENST00000363237 DEFB110Q30KQ9 67 aa-0.04□□□□□ -2.42
RNU6-1249P-201ENST00000363237 WFDC10BQ8IUB3 73 aa-0.04□□□□□ -2.42
RNU6-1249P-201ENST00000363237 FAT3Q8TDW7 4589 aa-0.04□□□□□ -2.42
RNU6-1249P-201ENST00000363237 DMXL1Q9Y485 3027 aa-0.05□□□□□ -2.42
RNU6-1249P-201ENST00000363237 LINC01546A6NGU7 62 aa-0.05□□□□□ -2.42
RNU6-1249P-201ENST00000363237 M0QY20 66 aa-0.05□□□□□ -2.42
RNU6-1249P-201ENST00000363237 SPRR2FQ96RM1 72 aa-0.05□□□□□ -2.42
RNU6-1249P-201ENST00000363237 GCN1Q92616 2671 aaKnown RBP-0.05□□□□□ -2.42
RNU6-1249P-201ENST00000363237 SPG11Q96JI7 2443 aa-0.06□□□□□ -2.42
RNU6-1249P-201ENST00000363237 AKAP9Q99996 3911 aa-0.06□□□□□ -2.42
RNU6-1249P-201ENST00000363237 IQGAP2Q13576 1575 aa-0.06□□□□□ -2.42
RNU6-1249P-201ENST00000363237 MTORP42345 2549 aa-0.07□□□□□ -2.42
RNU6-1249P-201ENST00000363237 TNP1P09430 55 aa-0.07□□□□□ -2.42
RNU6-1249P-201ENST00000363237 A0A0C4DFX4 3053 aa-0.07□□□□□ -2.42
RNU6-1249P-201ENST00000363237 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
RNU6-1249P-201ENST00000363237 A8MTW9 85 aa-0.08□□□□□ -2.42
RNU6-1249P-201ENST00000363237 HTTP42858 3142 aa-0.08□□□□□ -2.42
RNU6-1249P-201ENST00000363237 TGP01266 2768 aa-0.08□□□□□ -2.42
RNU6-1249P-201ENST00000363237 TFF3Q07654 80 aa-0.09□□□□□ -2.42
RNU6-1249P-201ENST00000363237 TACC2O95359 2948 aa-0.09□□□□□ -2.42
RNU6-1249P-201ENST00000363237 SMIM2Q9BVW6 85 aa-0.1□□□□□ -2.43
RNU6-1249P-201ENST00000363237 ANKRD11Q6UB99 2663 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-1249P-201ENST00000363237 CLTCL1P53675 1640 aa-0.1□□□□□ -2.43
RNU6-1249P-201ENST00000363237 NFAT5O94916 1531 aa-0.11□□□□□ -2.43
RNU6-1249P-201ENST00000363237 DEFB131AP59861 70 aa-0.11□□□□□ -2.43
RNU6-1249P-201ENST00000363237 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
RNU6-1249P-201ENST00000363237 TEP1Q99973 2627 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1249P-201ENST00000363237 STAB2Q8WWQ8 2551 aa-0.12□□□□□ -2.43
RNU6-1249P-201ENST00000363237 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
RNU6-1249P-201ENST00000363237 M0QZ58 72 aa-0.12□□□□□ -2.43
RNU6-1249P-201ENST00000363237 SRRM2Q9UQ35 2752 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1249P-201ENST00000363237 TRPM2O94759 1503 aa-0.13□□□□□ -2.43
RNU6-1249P-201ENST00000363237 APOBP04114 4563 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1249P-201ENST00000363237 DNAH2Q9P225 4427 aa-0.14□□□□□ -2.43
RNU6-1249P-201ENST00000363237 KRTAP19-7Q3SYF9 63 aa-0.14□□□□□ -2.43
RNU6-1249P-201ENST00000363237 HIVEP1P15822 2718 aa-0.14□□□□□ -2.43
RNU6-1249P-201ENST00000363237 FAM186AA6NE01 2351 aa-0.14□□□□□ -2.43
RNU6-1249P-201ENST00000363237 DNAH6Q9C0G6 4158 aa-0.15□□□□□ -2.43
RNU6-1249P-201ENST00000363237 LRRK2Q5S007 2527 aa-0.15□□□□□ -2.43
RNU6-1249P-201ENST00000363237 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.16□□□□□ -2.43
RNU6-1249P-201ENST00000363237 SPENQ96T58 3664 aaKnown RBP-0.16□□□□□ -2.43
RNU6-1249P-201ENST00000363237 MUC2Q02817 5179 aa-0.16□□□□□ -2.44
RNU6-1249P-201ENST00000363237 KALRNO60229 2985 aa-0.16□□□□□ -2.44
RNU6-1249P-201ENST00000363237 ACACAQ13085 2346 aa-0.16□□□□□ -2.44
RNU6-1249P-201ENST00000363237 LAMA5O15230 3695 aa-0.17□□□□□ -2.44
RNU6-1249P-201ENST00000363237 GPR98Q8WXG9 6306 aa-0.17□□□□□ -2.44
RNU6-1249P-201ENST00000363237 ACACBO00763 2458 aa-0.17□□□□□ -2.44
RNU6-1249P-201ENST00000363237 NBEAL2Q6ZNJ1 2754 aa-0.17□□□□□ -2.44
RNU6-1249P-201ENST00000363237 RANBP2P49792 3224 aaKnown RBP-0.17□□□□□ -2.44
RNU6-1249P-201ENST00000363237 NBPF19A0A087WUL8 3843 aa-0.18□□□□□ -2.44
RNU6-1249P-201ENST00000363237 EPG5Q9HCE0 2579 aa-0.18□□□□□ -2.44
RNU6-1249P-201ENST00000363237 CLPSL2Q6UWE3 100 aa-0.19□□□□□ -2.44
RNU6-1249P-201ENST00000363237 NBEAQ8NFP9 2946 aa-0.19□□□□□ -2.44
RNU6-1249P-201ENST00000363237 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
RNU6-1249P-201ENST00000363237 VPS13DQ5THJ4 4388 aa-0.2□□□□□ -2.44
RNU6-1249P-201ENST00000363237 FASNP49327 2511 aaKnown RBP-0.2□□□□□ -2.44
RNU6-1249P-201ENST00000363237 TRIOO75962 3097 aa-0.2□□□□□ -2.44
RNU6-1249P-201ENST00000363237 DNAH11Q96DT5 4516 aa-0.2□□□□□ -2.44
RNU6-1249P-201ENST00000363237 SSPOA2VEC9 5147 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms