RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 PRO0628Q9UI54 55 aa14.29□□□□□ -0.12
CROCCP2-201ENST00000362058 IGLV7-46A0A075B6I9 117 aa14.25□□□□□ -0.13
CROCCP2-201ENST00000362058 SPINK6Q6UWN8 80 aa14.25□□□□□ -0.13
CROCCP2-201ENST00000362058 A0A087X002 238 aa14.24□□□□□ -0.13
CROCCP2-201ENST00000362058 NOTCH2NLQ7Z3S9 236 aa14.24□□□□□ -0.13
CROCCP2-201ENST00000362058 Q6ZSA8 131 aa14.22□□□□□ -0.13
CROCCP2-201ENST00000362058 V9GYY9 64 aa14.22□□□□□ -0.13
CROCCP2-201ENST00000362058 DNAH5Q8TE73 4624 aa14.2□□□□□ -0.14
CROCCP2-201ENST00000362058 PCOTHQ58A44 107 aa14.19□□□□□ -0.14
CROCCP2-201ENST00000362058 BRK1Q8WUW1 75 aa14.19□□□□□ -0.14
CROCCP2-201ENST00000362058 C8orf87E5RJ46 101 aa14.17□□□□□ -0.14
CROCCP2-201ENST00000362058 KRTAP10-1P60331 282 aa14.17□□□□□ -0.14
CROCCP2-201ENST00000362058 ALMS1Q8TCU4 4167 aa14.15□□□□□ -0.14
CROCCP2-201ENST00000362058 DNAH11Q96DT5 4516 aa14.15□□□□□ -0.14
CROCCP2-201ENST00000362058 C1orf195Q5TG92 126 aa14.11□□□□□ -0.15
CROCCP2-201ENST00000362058 COA5Q86WW8 74 aa14.1□□□□□ -0.15
CROCCP2-201ENST00000362058 LOC101927531A0A1B0GV80 90 aa14.1□□□□□ -0.15
CROCCP2-201ENST00000362058 KRTAP21-3Q3LHN1 58 aa14.1□□□□□ -0.15
CROCCP2-201ENST00000362058 KRTAP13-2Q52LG2 175 aa14.09□□□□□ -0.15
CROCCP2-201ENST00000362058 PSPHP1O15172 72 aa14.08□□□□□ -0.16
CROCCP2-201ENST00000362058 LIMD2Q9BT23 127 aa14.05□□□□□ -0.16
CROCCP2-201ENST00000362058 Q8N9P0 234 aaPredicted RBP14.04□□□□□ -0.16
CROCCP2-201ENST00000362058 LINC00313P59037 77 aa14.02□□□□□ -0.16
CROCCP2-201ENST00000362058 KRTAP13-3Q3SY46 172 aa14.02□□□□□ -0.16
CROCCP2-201ENST00000362058 Q5W150 140 aa14.02□□□□□ -0.16
CROCCP2-201ENST00000362058 PKD1P98161 4303 aa14.01□□□□□ -0.17
CROCCP2-201ENST00000362058 A8MUN3 132 aa13.99□□□□□ -0.17
CROCCP2-201ENST00000362058 KRTAP1-4P0C5Y4 121 aa13.97□□□□□ -0.17
CROCCP2-201ENST00000362058 FAT2Q9NYQ8 4349 aa13.93□□□□□ -0.18
CROCCP2-201ENST00000362058 FAM229AH3BQW9 127 aa13.92□□□□□ -0.18
CROCCP2-201ENST00000362058 Q5VV11 94 aa13.92□□□□□ -0.18
CROCCP2-201ENST00000362058 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
CROCCP2-201ENST00000362058 HYDINQ4G0P3 5121 aa13.91□□□□□ -0.18
CROCCP2-201ENST00000362058 HRES1P13985 223 aa13.9□□□□□ -0.18
CROCCP2-201ENST00000362058 PRR15LQ9BU68 103 aa13.89□□□□□ -0.19
CROCCP2-201ENST00000362058 C4orf48Q5BLP8 95 aa13.88□□□□□ -0.19
CROCCP2-201ENST00000362058 PLA2G1BP04054 148 aaKnown RBP13.86□□□□□ -0.19
CROCCP2-201ENST00000362058 TYMSOSQ8TAI1 123 aa13.83□□□□□ -0.2
CROCCP2-201ENST00000362058 KRTAP16-1A8MUX0 517 aa13.81□□□□□ -0.2
CROCCP2-201ENST00000362058 CHKB-CPT1BH3BT56 60 aa13.81□□□□□ -0.2
CROCCP2-201ENST00000362058 SPINK1P00995 79 aa13.8□□□□□ -0.2
CROCCP2-201ENST00000362058 LINC01558Q9Y6Z2 57 aa13.8□□□□□ -0.2
CROCCP2-201ENST00000362058 Q75L30 129 aa13.79□□□□□ -0.2
CROCCP2-201ENST00000362058 ACYP2P14621 99 aa13.78□□□□□ -0.2
CROCCP2-201ENST00000362058 SPAG11AQ6PDA7 123 aa13.77□□□□□ -0.21
CROCCP2-201ENST00000362058 IGKV2-30P06310 120 aa13.76□□□□□ -0.21
CROCCP2-201ENST00000362058 VPS13BQ7Z7G8 4022 aa13.75□□□□□ -0.21
CROCCP2-201ENST00000362058 RETNLBQ9BQ08 111 aa13.74□□□□□ -0.21
CROCCP2-201ENST00000362058 DMAC1Q96GE9 116 aa13.71□□□□□ -0.21
CROCCP2-201ENST00000362058 RPS29P62273 56 aaKnown RBP13.68□□□□□ -0.22
CROCCP2-201ENST00000362058 LINC00304Q8N9R0 145 aa13.65□□□□□ -0.22
CROCCP2-201ENST00000362058 A6NED7 52 aa13.64□□□□□ -0.23
CROCCP2-201ENST00000362058 PRR26Q8N8Z3 221 aa13.63□□□□□ -0.23
CROCCP2-201ENST00000362058 IGKV2D-30A0A075B6S6 120 aa13.56□□□□□ -0.24
CROCCP2-201ENST00000362058 SACSQ9NZJ4 4579 aa13.55□□□□□ -0.24
CROCCP2-201ENST00000362058 A8MU10 97 aa13.54□□□□□ -0.24
CROCCP2-201ENST00000362058 SMR3BP02814 79 aaPredicted RBP13.52□□□□□ -0.24
CROCCP2-201ENST00000362058 LCA10Q71F78 164 aa13.52□□□□□ -0.25
CROCCP2-201ENST00000362058 A0A1B0GVY2 172 aa13.51□□□□□ -0.25
CROCCP2-201ENST00000362058 CDC42SE1Q9NRR8 79 aa13.51□□□□□ -0.25
CROCCP2-201ENST00000362058 PKHD1P08F94 4074 aa13.49□□□□□ -0.25
CROCCP2-201ENST00000362058 DYNC1H1Q14204 4646 aaKnown RBP13.46□□□□□ -0.26
CROCCP2-201ENST00000362058 ATP11AUNQ6ZP68 121 aa13.46□□□□□ -0.26
CROCCP2-201ENST00000362058 PMAIP1Q13794 54 aa13.42□□□□□ -0.26
CROCCP2-201ENST00000362058 C7orf65Q6ZTY9 151 aa13.42□□□□□ -0.26
CROCCP2-201ENST00000362058 SPINK7P58062 85 aa13.41□□□□□ -0.26
CROCCP2-201ENST00000362058 KRTAP10-4P60372 401 aaPredicted RBP13.39□□□□□ -0.27
CROCCP2-201ENST00000362058 SPTSSBQ8NFR3 76 aa13.39□□□□□ -0.27
CROCCP2-201ENST00000362058 A0A1B0GU69 56 aa13.33□□□□□ -0.28
CROCCP2-201ENST00000362058 C20orf166-AS1Q96NR2 134 aa13.29□□□□□ -0.28
CROCCP2-201ENST00000362058 APOBP04114 4563 aaKnown RBP13.28□□□□□ -0.28
CROCCP2-201ENST00000362058 A8MUU9 505 aa13.28□□□□□ -0.28
CROCCP2-201ENST00000362058 C9orf92A6NGG3 77 aa13.26□□□□□ -0.29
CROCCP2-201ENST00000362058 PKHD1L1Q86WI1 4243 aa13.24□□□□□ -0.29
CROCCP2-201ENST00000362058 FAT1Q14517 4588 aa13.2□□□□□ -0.3
CROCCP2-201ENST00000362058 Q8N1X5 172 aa13.19□□□□□ -0.3
CROCCP2-201ENST00000362058 A6NN06 94 aa13.18□□□□□ -0.3
CROCCP2-201ENST00000362058 RYR2Q92736 4967 aa13.16□□□□□ -0.3
CROCCP2-201ENST00000362058 KTN1-AS1Q86SY8 53 aa13.12□□□□□ -0.31
CROCCP2-201ENST00000362058 UQCR11O14957 56 aa13.08□□□□□ -0.31
CROCCP2-201ENST00000362058 SPATA8Q6RVD6 105 aa13.07□□□□□ -0.32
CROCCP2-201ENST00000362058 MIR22HGQ0VDD5 57 aa13.01□□□□□ -0.33
CROCCP2-201ENST00000362058 FLG2Q5D862 2391 aaPredicted RBP13□□□□□ -0.33
CROCCP2-201ENST00000362058 SEC61GP60059 68 aa13□□□□□ -0.33
CROCCP2-201ENST00000362058 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
CROCCP2-201ENST00000362058 KRTAP10-8P60410 259 aa12.92□□□□□ -0.34
CROCCP2-201ENST00000362058 KRTAP3-1Q9BYR8 98 aa12.92□□□□□ -0.34
CROCCP2-201ENST00000362058 Q5VSD8 79 aa12.89□□□□□ -0.35
CROCCP2-201ENST00000362058 COX6B2Q6YFQ2 88 aa12.83□□□□□ -0.36
CROCCP2-201ENST00000362058 FAT3Q8TDW7 4589 aa12.81□□□□□ -0.36
CROCCP2-201ENST00000362058 TNXBP22105 4242 aa12.77□□□□□ -0.37
CROCCP2-201ENST00000362058 RPL37P61927 97 aaKnown RBP12.72□□□□□ -0.37
CROCCP2-201ENST00000362058 LRP1Q07954 4544 aaKnown RBP12.71□□□□□ -0.38
CROCCP2-201ENST00000362058 HSPG2P98160 4391 aa12.69□□□□□ -0.38
CROCCP2-201ENST00000362058 RBM12B-AS1Q9P1G2 102 aa12.68□□□□□ -0.38
CROCCP2-201ENST00000362058 RYR3Q15413 4870 aa12.65□□□□□ -0.38
CROCCP2-201ENST00000362058 A0A1B0GU33 70 aa12.64□□□□□ -0.39
CROCCP2-201ENST00000362058 XP32Q5T750 250 aa12.64□□□□□ -0.39
CROCCP2-201ENST00000362058 RYR1P21817 5038 aa12.62□□□□□ -0.39
CROCCP2-201ENST00000362058 H1FX-AS1Q4G0G2 97 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms