RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CEND1Q8N111 149 aa10.15□□□□□ -0.78
CD47-202ENST00000361309 A8MWP4 228 aa10.14□□□□□ -0.79
CD47-202ENST00000361309 H3BQ85 93 aa10.12□□□□□ -0.79
CD47-202ENST00000361309 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
CD47-202ENST00000361309 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
CD47-202ENST00000361309 TMEM256-PLSCR3K7ERE1 68 aa10.11□□□□□ -0.79
CD47-202ENST00000361309 FXYD2P54710 66 aa10.1□□□□□ -0.79
CD47-202ENST00000361309 SPATA45Q537H7 98 aa10.1□□□□□ -0.79
CD47-202ENST00000361309 KRTAP6-3Q3LI67 103 aa10.09□□□□□ -0.79
CD47-202ENST00000361309 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
CD47-202ENST00000361309 VPS25Q9BRG1 176 aa10.07□□□□□ -0.8
CD47-202ENST00000361309 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
CD47-202ENST00000361309 PSMB2P49721 201 aa10.04□□□□□ -0.8
CD47-202ENST00000361309 UBE2V1Q13404 147 aa10.03□□□□□ -0.8
CD47-202ENST00000361309 VAMP8Q9BV40 100 aa10.01□□□□□ -0.81
CD47-202ENST00000361309 J3KT08 172 aa9.99□□□□□ -0.81
CD47-202ENST00000361309 COX6CP09669 75 aa9.98□□□□□ -0.81
CD47-202ENST00000361309 K7ERJ3 54 aa9.97□□□□□ -0.81
CD47-202ENST00000361309 S100A1P23297 94 aa9.97□□□□□ -0.81
CD47-202ENST00000361309 RBM3P98179 157 aaKnown RBP9.97□□□□□ -0.81
CD47-202ENST00000361309 LYRM7Q5U5X0 104 aa9.96□□□□□ -0.82
CD47-202ENST00000361309 DSCR8Q96T75 97 aa9.95□□□□□ -0.82
CD47-202ENST00000361309 NDUFB1O75438 58 aa9.93□□□□□ -0.82
CD47-202ENST00000361309 C8orf17Q9NRJ1 99 aa9.91□□□□□ -0.82
CD47-202ENST00000361309 Q6ZQT0 140 aa9.9□□□□□ -0.82
CD47-202ENST00000361309 C21orf62-AS1Q17RA5 79 aa9.89□□□□□ -0.83
CD47-202ENST00000361309 HSD52Q0P140 79 aa9.88□□□□□ -0.83
CD47-202ENST00000361309 C9JAW5 83 aa9.87□□□□□ -0.83
CD47-202ENST00000361309 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
CD47-202ENST00000361309 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
CD47-202ENST00000361309 Q6ZVQ6 151 aa9.83□□□□□ -0.84
CD47-202ENST00000361309 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
CD47-202ENST00000361309 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
CD47-202ENST00000361309 NEBP20929 6669 aa9.78□□□□□ -0.84
CD47-202ENST00000361309 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
CD47-202ENST00000361309 MRPL34Q9BQ48 92 aaKnown RBP9.71□□□□□ -0.86
CD47-202ENST00000361309 MUC12Q9UKN1 5478 aa9.7□□□□□ -0.86
CD47-202ENST00000361309 A0A1B0GW54 56 aa9.7□□□□□ -0.86
CD47-202ENST00000361309 TMEM254Q8TBM7 123 aa9.7□□□□□ -0.86
CD47-202ENST00000361309 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
CD47-202ENST00000361309 LOC110117498A0A087WWA1 95 aa9.68□□□□□ -0.86
CD47-202ENST00000361309 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
CD47-202ENST00000361309 A6NN06 94 aa9.66□□□□□ -0.86
CD47-202ENST00000361309 PYY3Q5JQD4 70 aa9.66□□□□□ -0.86
CD47-202ENST00000361309 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
CD47-202ENST00000361309 NDUFS5O43920 106 aa9.65□□□□□ -0.86
CD47-202ENST00000361309 IGKV2-30P06310 120 aa9.65□□□□□ -0.86
CD47-202ENST00000361309 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
CD47-202ENST00000361309 hDV103S1A0JD37 113 aa9.62□□□□□ -0.87
CD47-202ENST00000361309 PDE6GP18545 87 aa9.62□□□□□ -0.87
CD47-202ENST00000361309 NREPQ16612 68 aa9.62□□□□□ -0.87
CD47-202ENST00000361309 C14orf132Q9NPU4 83 aa9.6□□□□□ -0.87
CD47-202ENST00000361309 MT1BP07438 61 aa9.59□□□□□ -0.87
CD47-202ENST00000361309 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
CD47-202ENST00000361309 C7orf65Q6ZTY9 151 aa9.59□□□□□ -0.87
CD47-202ENST00000361309 KRTAP20-1Q3LI63 56 aa9.57□□□□□ -0.88
CD47-202ENST00000361309 Q5W150 140 aa9.57□□□□□ -0.88
CD47-202ENST00000361309 FAM236AA0A1B0GUQ0 79 aa9.56□□□□□ -0.88
CD47-202ENST00000361309 FAM236BA0A1B0GV22 79 aa9.56□□□□□ -0.88
CD47-202ENST00000361309 K7EQZ3 153 aa9.56□□□□□ -0.88
CD47-202ENST00000361309 Q5VV11 94 aa9.54□□□□□ -0.88
CD47-202ENST00000361309 C4orf26Q17RF5 130 aa9.53□□□□□ -0.88
CD47-202ENST00000361309 C5orf47Q569G3 176 aa9.53□□□□□ -0.88
CD47-202ENST00000361309 NAA38Q9BRA0 125 aaKnown RBP9.53□□□□□ -0.88
CD47-202ENST00000361309 KRTAP19-8Q3LI54 63 aa9.48□□□□□ -0.89
CD47-202ENST00000361309 KRTAP10-5P60370 271 aa9.46□□□□□ -0.9
CD47-202ENST00000361309 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
CD47-202ENST00000361309 KRTAP5-9P26371 169 aa9.43□□□□□ -0.9
CD47-202ENST00000361309 HCG22E2RYF7 251 aa9.4□□□□□ -0.9
CD47-202ENST00000361309 BPY2O14599 106 aa9.4□□□□□ -0.9
CD47-202ENST00000361309 S4R3F8 94 aa9.39□□□□□ -0.91
CD47-202ENST00000361309 KMT2DO14686 5537 aa9.39□□□□□ -0.91
CD47-202ENST00000361309 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
CD47-202ENST00000361309 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
CD47-202ENST00000361309 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
CD47-202ENST00000361309 MDN1Q9NU22 5596 aa9.37□□□□□ -0.91
CD47-202ENST00000361309 M0R143 59 aa9.35□□□□□ -0.91
CD47-202ENST00000361309 Q8N9L7 120 aa9.35□□□□□ -0.91
CD47-202ENST00000361309 LCA10Q71F78 164 aa9.33□□□□□ -0.92
CD47-202ENST00000361309 CXCL6P80162 114 aa9.32□□□□□ -0.92
CD47-202ENST00000361309 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
CD47-202ENST00000361309 C1orf64Q8NEQ6 169 aa9.28□□□□□ -0.92
CD47-202ENST00000361309 LOC100996750A0A140TA64 210 aa9.25□□□□□ -0.93
CD47-202ENST00000361309 KRTAP4-6Q9BYQ5 205 aa9.25□□□□□ -0.93
CD47-202ENST00000361309 IMUPQ9GZP8 106 aa9.23□□□□□ -0.93
CD47-202ENST00000361309 H3BT86 120 aa9.22□□□□□ -0.93
CD47-202ENST00000361309 TMA7Q9Y2S6 64 aaKnown RBP9.22□□□□□ -0.93
CD47-202ENST00000361309 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
CD47-202ENST00000361309 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
CD47-202ENST00000361309 TSTD3H0UI37 97 aa9.17□□□□□ -0.94
CD47-202ENST00000361309 BATFQ16520 125 aa9.1□□□□□ -0.95
CD47-202ENST00000361309 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
CD47-202ENST00000361309 SPRR2FQ96RM1 72 aa9.06□□□□□ -0.96
CD47-202ENST00000361309 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
CD47-202ENST00000361309 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
CD47-202ENST00000361309 SPRR2EP22531 72 aa9.04□□□□□ -0.96
CD47-202ENST00000361309 SPRR2BP35325 72 aa9.04□□□□□ -0.96
CD47-202ENST00000361309 SPRR2AP35326 72 aa9.04□□□□□ -0.96
CD47-202ENST00000361309 A0A087WVE0 104 aa9.02□□□□□ -0.97
CD47-202ENST00000361309 UBL5Q9BZL1 73 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms