RNA–Protein interactions for RNA: ENST00000361227.2

MT-ND3-201, Transcript of mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3, humanhuman

APPRIS P1 BASIC

Gene MT-ND3, Length 346 nt, Biotype protein coding, Subcellular localisation Cytosol, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3-201ENST00000361227 GCN1Q92616 2671 aaKnown RBP1.09□□□□□ -2.24
MT-ND3-201ENST00000361227 ACACAQ13085 2346 aa1.09□□□□□ -2.24
MT-ND3-201ENST00000361227 FLNCQ14315 2725 aa1.09□□□□□ -2.24
MT-ND3-201ENST00000361227 CREBBPQ92793 2442 aa1.08□□□□□ -2.24
MT-ND3-201ENST00000361227 SETD2Q9BYW2 2564 aaPredicted RBP1.08□□□□□ -2.24
MT-ND3-201ENST00000361227 USP24Q9UPU5 2620 aa1.08□□□□□ -2.24
MT-ND3-201ENST00000361227 BSNQ9UPA5 3926 aa1.08□□□□□ -2.24
MT-ND3-201ENST00000361227 PKD1L1Q8TDX9 2849 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 ZZEF1O43149 2961 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 KRTAP2-3P0C7H8 128 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 KRTAP2-4Q9BYR9 128 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 VPS13BQ7Z7G8 4022 aa1.07□□□□□ -2.24
MT-ND3-201ENST00000361227 TACC2O95359 2948 aa1.06□□□□□ -2.24
MT-ND3-201ENST00000361227 TNP1P09430 55 aa1.06□□□□□ -2.24
MT-ND3-201ENST00000361227 USP9YO00507 2555 aaPredicted RBP1.06□□□□□ -2.24
MT-ND3-201ENST00000361227 SACSQ9NZJ4 4579 aa1.06□□□□□ -2.24
MT-ND3-201ENST00000361227 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
MT-ND3-201ENST00000361227 TNXBP22105 4242 aa1.05□□□□□ -2.24
MT-ND3-201ENST00000361227 CHD8Q9HCK8 2581 aa1.04□□□□□ -2.24
MT-ND3-201ENST00000361227 ZNF469Q96JG9 3925 aaPredicted RBP1.04□□□□□ -2.24
MT-ND3-201ENST00000361227 C9orf92A6NGG3 77 aa1.03□□□□□ -2.24
MT-ND3-201ENST00000361227 H3BNG1 76 aa1.03□□□□□ -2.24
MT-ND3-201ENST00000361227 DMXL1Q9Y485 3027 aa1.03□□□□□ -2.24
MT-ND3-201ENST00000361227 NBASA2RRP1 2371 aa1.03□□□□□ -2.25
MT-ND3-201ENST00000361227 DMBT1Q9UGM3 2413 aaPredicted RBP1.03□□□□□ -2.25
MT-ND3-201ENST00000361227 KMT2AQ03164 3969 aa1.02□□□□□ -2.25
MT-ND3-201ENST00000361227 SETXQ7Z333 2677 aaKnown RBP1.02□□□□□ -2.25
MT-ND3-201ENST00000361227 MYCBP2O75592 4640 aa1.02□□□□□ -2.25
MT-ND3-201ENST00000361227 VPS13DQ5THJ4 4388 aa1.01□□□□□ -2.25
MT-ND3-201ENST00000361227 APELAP0DMC3 54 aa1.01□□□□□ -2.25
MT-ND3-201ENST00000361227 U3KQA8 63 aa1.01□□□□□ -2.25
MT-ND3-201ENST00000361227 KALRNO60229 2985 aa1.01□□□□□ -2.25
MT-ND3-201ENST00000361227 NBPF19A0A087WUL8 3843 aa1.01□□□□□ -2.25
MT-ND3-201ENST00000361227 FAT2Q9NYQ8 4349 aa1.01□□□□□ -2.25
MT-ND3-201ENST00000361227 PRM1P04553 51 aa1□□□□□ -2.25
MT-ND3-201ENST00000361227 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
MT-ND3-201ENST00000361227 CFAP54Q96N23 3096 aa1□□□□□ -2.25
MT-ND3-201ENST00000361227 MAP1BP46821 2468 aaKnown RBP0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 SPENQ96T58 3664 aaKnown RBP0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 UNC79Q9P2D8 2635 aa0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 H3BUX3 64 aa0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 FRAS1Q86XX4 4008 aa0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 ZFHX4Q86UP3 3567 aa0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 NBEAL2Q6ZNJ1 2754 aa0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 COL12A1Q99715 3063 aa0.99□□□□□ -2.25
MT-ND3-201ENST00000361227 HIVEP3Q5T1R4 2406 aa0.98□□□□□ -2.25
MT-ND3-201ENST00000361227 HIVEP1P15822 2718 aa0.98□□□□□ -2.25
MT-ND3-201ENST00000361227 NSD1Q96L73 2696 aaPredicted RBP0.97□□□□□ -2.25
MT-ND3-201ENST00000361227 DEFB1P60022 68 aa0.97□□□□□ -2.25
MT-ND3-201ENST00000361227 DEFB110Q30KQ9 67 aa0.97□□□□□ -2.25
MT-ND3-201ENST00000361227 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
MT-ND3-201ENST00000361227 EPG5Q9HCE0 2579 aa0.97□□□□□ -2.25
MT-ND3-201ENST00000361227 ANKRD11Q6UB99 2663 aaPredicted RBP0.96□□□□□ -2.26
MT-ND3-201ENST00000361227 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
MT-ND3-201ENST00000361227 APC2O95996 2303 aa0.95□□□□□ -2.26
MT-ND3-201ENST00000361227 LRBAP50851 2863 aa0.95□□□□□ -2.26
MT-ND3-201ENST00000361227 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
MT-ND3-201ENST00000361227 NBEAQ8NFP9 2946 aa0.95□□□□□ -2.26
MT-ND3-201ENST00000361227 RHPN1-AS1Q9BWJ2 59 aa0.95□□□□□ -2.26
MT-ND3-201ENST00000361227 RIF1Q5UIP0 2472 aaKnown RBP0.94□□□□□ -2.26
MT-ND3-201ENST00000361227 UTP20O75691 2785 aaKnown RBP0.94□□□□□ -2.26
MT-ND3-201ENST00000361227 LRRK2Q5S007 2527 aa0.94□□□□□ -2.26
MT-ND3-201ENST00000361227 RANBP2P49792 3224 aaKnown RBP0.94□□□□□ -2.26
MT-ND3-201ENST00000361227 CELSR3Q9NYQ7 3312 aa0.94□□□□□ -2.26
MT-ND3-201ENST00000361227 A0A096LNI7 61 aa0.93□□□□□ -2.26
MT-ND3-201ENST00000361227 HTN1P15515 57 aa0.93□□□□□ -2.26
MT-ND3-201ENST00000361227 STAB1Q9NY15 2570 aa0.93□□□□□ -2.26
MT-ND3-201ENST00000361227 ACANP16112 2415 aa0.93□□□□□ -2.26
MT-ND3-201ENST00000361227 DNAH8Q96JB1 4490 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 FRYLO94915 3013 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 FLNBO75369 2602 aaKnown RBP0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 WDR87Q6ZQQ6 2873 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 DEFB136Q30KP8 78 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 PKD1P98161 4303 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 ZANQ9Y493 2812 aa0.92□□□□□ -2.26
MT-ND3-201ENST00000361227 MTORP42345 2549 aa0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 ZFYVE26Q68DK2 2539 aa0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 HECTD4Q9Y4D8 3996 aa0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 AKAP9Q99996 3911 aa0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 DNAH3Q8TD57 4116 aa0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 ITPR1Q14643 2758 aa0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 DYNC2H1Q8NCM8 4307 aaKnown RBP0.91□□□□□ -2.26
MT-ND3-201ENST00000361227 RELNP78509 3460 aa0.9□□□□□ -2.26
MT-ND3-201ENST00000361227 PTPN13Q12923 2485 aa0.9□□□□□ -2.27
MT-ND3-201ENST00000361227 STATHP02808 62 aa0.9□□□□□ -2.27
MT-ND3-201ENST00000361227 CACNA1AO00555 2505 aa0.9□□□□□ -2.27
MT-ND3-201ENST00000361227 HUWE1Q7Z6Z7 4374 aaKnown RBP0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 ATMQ13315 3056 aa0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 PRUNE2Q8WUY3 3088 aa0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 DMXL2Q8TDJ6 3036 aa0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 FLGP20930 4061 aaPredicted RBP0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 FAM186AA6NE01 2351 aa0.89□□□□□ -2.27
MT-ND3-201ENST00000361227 DNAH7Q8WXX0 4024 aa0.88□□□□□ -2.27
MT-ND3-201ENST00000361227 DNAH12Q6ZR08 3092 aa0.88□□□□□ -2.27
MT-ND3-201ENST00000361227 DNAH2Q9P225 4427 aa0.88□□□□□ -2.27
MT-ND3-201ENST00000361227 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms