RNA–Protein interactions for RNA: ENST00000361070.8

RFWD3-201, Transcript of ring finger and WD repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFWD3, Length 4,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-201ENST00000361070 NIPBLQ6KC79 2804 aaeCLIP7.56□□□□□ -1.2
RFWD3-201ENST00000361070 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
RFWD3-201ENST00000361070 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
RFWD3-201ENST00000361070 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
RFWD3-201ENST00000361070 NF1P21359 2839 aa7.53□□□□□ -1.2
RFWD3-201ENST00000361070 BAHCC1Q9P281 2608 aa7.53□□□□□ -1.2
RFWD3-201ENST00000361070 STAB1Q9NY15 2570 aa7.52□□□□□ -1.21
RFWD3-201ENST00000361070 CRYBG3Q68DQ2 2970 aa7.51□□□□□ -1.21
RFWD3-201ENST00000361070 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
RFWD3-201ENST00000361070 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
RFWD3-201ENST00000361070 CELSR2Q9HCU4 2923 aa7.49□□□□□ -1.21
RFWD3-201ENST00000361070 NBEAL1Q6ZS30 2694 aa7.49□□□□□ -1.21
RFWD3-201ENST00000361070 COL6A5A8TX70 2615 aa7.49□□□□□ -1.21
RFWD3-201ENST00000361070 MUC3AQ02505 3323 aa7.49□□□□□ -1.21
RFWD3-201ENST00000361070 BSNQ9UPA5 3926 aa7.48□□□□□ -1.21
RFWD3-201ENST00000361070 A0A0D9SG42 100 aa7.47□□□□□ -1.21
RFWD3-201ENST00000361070 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
RFWD3-201ENST00000361070 HIVEP1P15822 2718 aa7.44□□□□□ -1.22
RFWD3-201ENST00000361070 CELSR1Q9NYQ6 3014 aa7.4□□□□□ -1.23
RFWD3-201ENST00000361070 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
RFWD3-201ENST00000361070 H3BS24 57 aa7.38□□□□□ -1.23
RFWD3-201ENST00000361070 S4R3F8 94 aa7.38□□□□□ -1.23
RFWD3-201ENST00000361070 ROMO1P60602 79 aa7.37□□□□□ -1.23
RFWD3-201ENST00000361070 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
RFWD3-201ENST00000361070 ADM2Q7Z4H4 148 aa7.37□□□□□ -1.23
RFWD3-201ENST00000361070 SPENQ96T58 3664 aaKnown RBP7.35□□□□□ -1.23
RFWD3-201ENST00000361070 SVEP1Q4LDE5 3571 aa7.33□□□□□ -1.24
RFWD3-201ENST00000361070 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
RFWD3-201ENST00000361070 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
RFWD3-201ENST00000361070 PDZD2O15018 2839 aa7.31□□□□□ -1.24
RFWD3-201ENST00000361070 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
RFWD3-201ENST00000361070 Q6ZSA8 131 aa7.27□□□□□ -1.25
RFWD3-201ENST00000361070 A8MUU9 505 aa7.24□□□□□ -1.25
RFWD3-201ENST00000361070 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
RFWD3-201ENST00000361070 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
RFWD3-201ENST00000361070 KRTAP1-4P0C5Y4 121 aa7.23□□□□□ -1.25
RFWD3-201ENST00000361070 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
RFWD3-201ENST00000361070 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
RFWD3-201ENST00000361070 TENM1Q9UKZ4 2725 aa7.13□□□□□ -1.27
RFWD3-201ENST00000361070 VWFP04275 2813 aa7.11□□□□□ -1.27
RFWD3-201ENST00000361070 H0YAA0 97 aa7.1□□□□□ -1.27
RFWD3-201ENST00000361070 Q5VSD8 79 aa7.1□□□□□ -1.27
RFWD3-201ENST00000361070 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
RFWD3-201ENST00000361070 J3QL48 77 aa7.07□□□□□ -1.28
RFWD3-201ENST00000361070 R4GN34 69 aa7.05□□□□□ -1.28
RFWD3-201ENST00000361070 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
RFWD3-201ENST00000361070 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.29
RFWD3-201ENST00000361070 M0QZ58 72 aa7.01□□□□□ -1.29
RFWD3-201ENST00000361070 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
RFWD3-201ENST00000361070 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
RFWD3-201ENST00000361070 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
RFWD3-201ENST00000361070 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.3
RFWD3-201ENST00000361070 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
RFWD3-201ENST00000361070 VPS13CQ709C8 3753 aa6.93□□□□□ -1.3
RFWD3-201ENST00000361070 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
RFWD3-201ENST00000361070 ZFHX3Q15911 3703 aa6.91□□□□□ -1.3
RFWD3-201ENST00000361070 PKD1L1Q8TDX9 2849 aa6.88□□□□□ -1.31
RFWD3-201ENST00000361070 TGP01266 2768 aa6.86□□□□□ -1.31
RFWD3-201ENST00000361070 XP32Q5T750 250 aa6.83□□□□□ -1.32
RFWD3-201ENST00000361070 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
RFWD3-201ENST00000361070 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
RFWD3-201ENST00000361070 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
RFWD3-201ENST00000361070 CUBNO60494 3623 aa6.8□□□□□ -1.32
RFWD3-201ENST00000361070 NDUFAF8A1L188 74 aa6.79□□□□□ -1.32
RFWD3-201ENST00000361070 FLG2Q5D862 2391 aaPredicted RBP6.78□□□□□ -1.32
RFWD3-201ENST00000361070 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
RFWD3-201ENST00000361070 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
RFWD3-201ENST00000361070 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
RFWD3-201ENST00000361070 FBN1P35555 2871 aaKnown RBP6.72□□□□□ -1.33
RFWD3-201ENST00000361070 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.34
RFWD3-201ENST00000361070 P0C880 135 aa6.69□□□□□ -1.34
RFWD3-201ENST00000361070 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
RFWD3-201ENST00000361070 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
RFWD3-201ENST00000361070 KRTAP10-8P60410 259 aa6.64□□□□□ -1.35
RFWD3-201ENST00000361070 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
RFWD3-201ENST00000361070 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
RFWD3-201ENST00000361070 TENM2Q9NT68 2774 aa6.6□□□□□ -1.35
RFWD3-201ENST00000361070 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
RFWD3-201ENST00000361070 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
RFWD3-201ENST00000361070 M0R2T5 61 aa6.55□□□□□ -1.36
RFWD3-201ENST00000361070 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
RFWD3-201ENST00000361070 MEGF8Q7Z7M0 2845 aa6.54□□□□□ -1.36
RFWD3-201ENST00000361070 FBN3Q75N90 2809 aa6.51□□□□□ -1.37
RFWD3-201ENST00000361070 TNP1P09430 55 aa6.5□□□□□ -1.37
RFWD3-201ENST00000361070 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
RFWD3-201ENST00000361070 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
RFWD3-201ENST00000361070 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
RFWD3-201ENST00000361070 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.38
RFWD3-201ENST00000361070 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.39
RFWD3-201ENST00000361070 DNAH1Q9P2D7 4330 aa6.37□□□□□ -1.39
RFWD3-201ENST00000361070 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
RFWD3-201ENST00000361070 DNAH10Q8IVF4 4471 aa6.36□□□□□ -1.39
RFWD3-201ENST00000361070 DNAH3Q8TD57 4116 aa6.35□□□□□ -1.39
RFWD3-201ENST00000361070 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
RFWD3-201ENST00000361070 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
RFWD3-201ENST00000361070 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
RFWD3-201ENST00000361070 PLECQ15149 4684 aaKnown RBP6.32□□□□□ -1.4
RFWD3-201ENST00000361070 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
RFWD3-201ENST00000361070 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
RFWD3-201ENST00000361070 CSMD3Q7Z407 3707 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms