RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 FAM218AQ96MZ4 157 aa6.6□□□□□ -1.35
VPS29-201ENST00000360579 A0A1B0GX51 115 aa6.59□□□□□ -1.35
VPS29-201ENST00000360579 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
VPS29-201ENST00000360579 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
VPS29-201ENST00000360579 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
VPS29-201ENST00000360579 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
VPS29-201ENST00000360579 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
VPS29-201ENST00000360579 ANKRD29Q8N6D5 301 aa6.58□□□□□ -1.36
VPS29-201ENST00000360579 RAB37Q96AX2 223 aa6.58□□□□□ -1.36
VPS29-201ENST00000360579 A0A1B0GVX0 72 aa6.54□□□□□ -1.36
VPS29-201ENST00000360579 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
VPS29-201ENST00000360579 A0A0B4J2C4 111 aa6.53□□□□□ -1.36
VPS29-201ENST00000360579 TRACP01848 142 aa6.53□□□□□ -1.36
VPS29-201ENST00000360579 H3BQ85 93 aa6.51□□□□□ -1.37
VPS29-201ENST00000360579 CCKP06307 115 aa6.51□□□□□ -1.37
VPS29-201ENST00000360579 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
VPS29-201ENST00000360579 A0A1B0GV72 72 aa6.48□□□□□ -1.37
VPS29-201ENST00000360579 DNAL4O96015 105 aa6.48□□□□□ -1.37
VPS29-201ENST00000360579 COX8AP10176 69 aa6.48□□□□□ -1.37
VPS29-201ENST00000360579 ORMDL1Q9P0S3 153 aa6.48□□□□□ -1.37
VPS29-201ENST00000360579 DLEU1O43261 78 aa6.47□□□□□ -1.37
VPS29-201ENST00000360579 S100A2P29034 98 aa6.47□□□□□ -1.37
VPS29-201ENST00000360579 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
VPS29-201ENST00000360579 J3KT08 172 aa6.46□□□□□ -1.38
VPS29-201ENST00000360579 TMEM256-PLSCR3K7ERE1 68 aa6.46□□□□□ -1.38
VPS29-201ENST00000360579 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
VPS29-201ENST00000360579 LYRM7Q5U5X0 104 aa6.45□□□□□ -1.38
VPS29-201ENST00000360579 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
VPS29-201ENST00000360579 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
VPS29-201ENST00000360579 PRO1854Q9UHT4 67 aa6.44□□□□□ -1.38
VPS29-201ENST00000360579 A6NN06 94 aa6.43□□□□□ -1.38
VPS29-201ENST00000360579 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
VPS29-201ENST00000360579 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
VPS29-201ENST00000360579 TRIAP1O43715 76 aa6.42□□□□□ -1.38
VPS29-201ENST00000360579 NDUFB1O75438 58 aa6.42□□□□□ -1.38
VPS29-201ENST00000360579 C21orf62-AS1Q17RA5 79 aa6.42□□□□□ -1.38
VPS29-201ENST00000360579 HIGD1BQ9P298 99 aa6.42□□□□□ -1.38
VPS29-201ENST00000360579 VPS25Q9BRG1 176 aa6.41□□□□□ -1.38
VPS29-201ENST00000360579 UBE2V1Q13404 147 aa6.39□□□□□ -1.39
VPS29-201ENST00000360579 KMT2DO14686 5537 aa6.37□□□□□ -1.39
VPS29-201ENST00000360579 IGKV3D-7A0A0C4DH55 119 aa6.37□□□□□ -1.39
VPS29-201ENST00000360579 CEND1Q8N111 149 aa6.37□□□□□ -1.39
VPS29-201ENST00000360579 C14orf144Q96I85 54 aa6.37□□□□□ -1.39
VPS29-201ENST00000360579 C8orf17Q9NRJ1 99 aa6.36□□□□□ -1.39
VPS29-201ENST00000360579 RBM3P98179 157 aaKnown RBP6.35□□□□□ -1.39
VPS29-201ENST00000360579 COX6CP09669 75 aa6.34□□□□□ -1.39
VPS29-201ENST00000360579 PSMB2P49721 201 aa6.34□□□□□ -1.39
VPS29-201ENST00000360579 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
VPS29-201ENST00000360579 C2orf91Q6ZV80 131 aa6.33□□□□□ -1.4
VPS29-201ENST00000360579 S100A6P06703 90 aa6.32□□□□□ -1.4
VPS29-201ENST00000360579 Q6ZQT0 140 aa6.32□□□□□ -1.4
VPS29-201ENST00000360579 Q6ZVQ6 151 aa6.32□□□□□ -1.4
VPS29-201ENST00000360579 FXYD2P54710 66 aa6.31□□□□□ -1.4
VPS29-201ENST00000360579 Q5VV11 94 aa6.31□□□□□ -1.4
VPS29-201ENST00000360579 C9JAW5 83 aa6.29□□□□□ -1.4
VPS29-201ENST00000360579 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
VPS29-201ENST00000360579 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
VPS29-201ENST00000360579 MT1BP07438 61 aa6.28□□□□□ -1.4
VPS29-201ENST00000360579 FAM236AA0A1B0GUQ0 79 aa6.27□□□□□ -1.41
VPS29-201ENST00000360579 FAM236BA0A1B0GV22 79 aa6.27□□□□□ -1.41
VPS29-201ENST00000360579 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
VPS29-201ENST00000360579 A0A1B0GW54 56 aa6.25□□□□□ -1.41
VPS29-201ENST00000360579 MRPL34Q9BQ48 92 aaKnown RBP6.24□□□□□ -1.41
VPS29-201ENST00000360579 VAMP8Q9BV40 100 aa6.24□□□□□ -1.41
VPS29-201ENST00000360579 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
VPS29-201ENST00000360579 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
VPS29-201ENST00000360579 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
VPS29-201ENST00000360579 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
VPS29-201ENST00000360579 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
VPS29-201ENST00000360579 K7ERJ3 54 aa6.22□□□□□ -1.41
VPS29-201ENST00000360579 S100A1P23297 94 aa6.22□□□□□ -1.41
VPS29-201ENST00000360579 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
VPS29-201ENST00000360579 IGKV2D-30A0A075B6S6 120 aa6.21□□□□□ -1.42
VPS29-201ENST00000360579 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
VPS29-201ENST00000360579 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.42
VPS29-201ENST00000360579 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
VPS29-201ENST00000360579 NDUFS5O43920 106 aa6.19□□□□□ -1.42
VPS29-201ENST00000360579 HSD52Q0P140 79 aa6.19□□□□□ -1.42
VPS29-201ENST00000360579 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
VPS29-201ENST00000360579 SCGB1C2P0DMR2 95 aa6.18□□□□□ -1.42
VPS29-201ENST00000360579 C5orf47Q569G3 176 aa6.18□□□□□ -1.42
VPS29-201ENST00000360579 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
VPS29-201ENST00000360579 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
VPS29-201ENST00000360579 PDE6GP18545 87 aa6.16□□□□□ -1.42
VPS29-201ENST00000360579 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
VPS29-201ENST00000360579 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
VPS29-201ENST00000360579 NREPQ16612 68 aa6.13□□□□□ -1.43
VPS29-201ENST00000360579 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
VPS29-201ENST00000360579 IMUPQ9GZP8 106 aa6.11□□□□□ -1.43
VPS29-201ENST00000360579 Q5W150 140 aa6.1□□□□□ -1.43
VPS29-201ENST00000360579 S4R3F8 94 aa6.09□□□□□ -1.43
VPS29-201ENST00000360579 K7EQZ3 153 aa6.08□□□□□ -1.44
VPS29-201ENST00000360579 KLKP1Q107X0 134 aa6.07□□□□□ -1.44
VPS29-201ENST00000360579 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
VPS29-201ENST00000360579 SPRR2EP22531 72 aa6.05□□□□□ -1.44
VPS29-201ENST00000360579 SPRR2BP35325 72 aa6.05□□□□□ -1.44
VPS29-201ENST00000360579 SPRR2AP35326 72 aa6.05□□□□□ -1.44
VPS29-201ENST00000360579 C14orf132Q9NPU4 83 aa6.05□□□□□ -1.44
VPS29-201ENST00000360579 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
VPS29-201ENST00000360579 LCA10Q71F78 164 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 397.2 ms