RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 LINC00336Q6ZUF6 198 aa15.47■□□□□ 0.07
CUEDC1-201ENST00000360238 NDUFS5O43920 106 aa15.46■□□□□ 0.07
CUEDC1-201ENST00000360238 Q1T7F1 81 aa15.45■□□□□ 0.06
CUEDC1-201ENST00000360238 A0A087X002 238 aa15.44■□□□□ 0.06
CUEDC1-201ENST00000360238 NOTCH2NLQ7Z3S9 236 aa15.44■□□□□ 0.06
CUEDC1-201ENST00000360238 KRTAP10-1P60331 282 aa15.43■□□□□ 0.06
CUEDC1-201ENST00000360238 SPINK6Q6UWN8 80 aa15.43■□□□□ 0.06
CUEDC1-201ENST00000360238 PKD1P98161 4303 aa15.41■□□□□ 0.06
CUEDC1-201ENST00000360238 IGLV7-46A0A075B6I9 117 aa15.39■□□□□ 0.05
CUEDC1-201ENST00000360238 FAT2Q9NYQ8 4349 aa15.36■□□□□ 0.05
CUEDC1-201ENST00000360238 PRO0628Q9UI54 55 aa15.35■□□□□ 0.05
CUEDC1-201ENST00000360238 C8orf87E5RJ46 101 aa15.34■□□□□ 0.05
CUEDC1-201ENST00000360238 KRTAP13-2Q52LG2 175 aa15.33■□□□□ 0.04
CUEDC1-201ENST00000360238 KRTAP21-3Q3LHN1 58 aa15.32■□□□□ 0.04
CUEDC1-201ENST00000360238 PCOTHQ58A44 107 aa15.32■□□□□ 0.04
CUEDC1-201ENST00000360238 HYDINQ4G0P3 5121 aa15.31■□□□□ 0.04
CUEDC1-201ENST00000360238 V9GYY9 64 aa15.29■□□□□ 0.04
CUEDC1-201ENST00000360238 LRP1BQ9NZR2 4599 aa15.25■□□□□ 0.03
CUEDC1-201ENST00000360238 LOC101927531A0A1B0GV80 90 aa15.24■□□□□ 0.03
CUEDC1-201ENST00000360238 KRTAP13-3Q3SY46 172 aa15.24■□□□□ 0.03
CUEDC1-201ENST00000360238 KRTAP1-4P0C5Y4 121 aa15.22■□□□□ 0.03
CUEDC1-201ENST00000360238 COA5Q86WW8 74 aa15.22■□□□□ 0.03
CUEDC1-201ENST00000360238 BRK1Q8WUW1 75 aa15.22■□□□□ 0.03
CUEDC1-201ENST00000360238 C1orf195Q5TG92 126 aa15.21■□□□□ 0.02
CUEDC1-201ENST00000360238 Q5W150 140 aa15.18■□□□□ 0.02
CUEDC1-201ENST00000360238 LINC00313P59037 77 aa15.17■□□□□ 0.02
CUEDC1-201ENST00000360238 LIMD2Q9BT23 127 aa15.16■□□□□ 0.02
CUEDC1-201ENST00000360238 PSPHP1O15172 72 aa15.15■□□□□ 0.02
CUEDC1-201ENST00000360238 Q8N9P0 234 aaPredicted RBP15.14■□□□□ 0.01
CUEDC1-201ENST00000360238 VPS13BQ7Z7G8 4022 aa15.12■□□□□ 0.01
CUEDC1-201ENST00000360238 A8MUN3 132 aa15.08■□□□□ 0
CUEDC1-201ENST00000360238 FAM229AH3BQW9 127 aa15.06■□□□□ 0
CUEDC1-201ENST00000360238 PLA2G1BP04054 148 aaKnown RBP15.04■□□□□ -0
CUEDC1-201ENST00000360238 HRES1P13985 223 aa15.02□□□□□ -0.01
CUEDC1-201ENST00000360238 Q5VV11 94 aa15.01□□□□□ -0.01
CUEDC1-201ENST00000360238 KRTAP16-1A8MUX0 517 aa15.01□□□□□ -0.01
CUEDC1-201ENST00000360238 TYMSOSQ8TAI1 123 aa15.01□□□□□ -0.01
CUEDC1-201ENST00000360238 C4orf48Q5BLP8 95 aa15□□□□□ -0.01
CUEDC1-201ENST00000360238 SPINK1P00995 79 aa14.98□□□□□ -0.01
CUEDC1-201ENST00000360238 PRR15LQ9BU68 103 aa14.95□□□□□ -0.02
CUEDC1-201ENST00000360238 SACSQ9NZJ4 4579 aa14.93□□□□□ -0.02
CUEDC1-201ENST00000360238 PKHD1P08F94 4074 aa14.91□□□□□ -0.02
CUEDC1-201ENST00000360238 IGKV2-30P06310 120 aa14.9□□□□□ -0.02
CUEDC1-201ENST00000360238 LINC01558Q9Y6Z2 57 aa14.87□□□□□ -0.03
CUEDC1-201ENST00000360238 RPS29P62273 56 aaKnown RBP14.87□□□□□ -0.03
CUEDC1-201ENST00000360238 Q75L30 129 aa14.87□□□□□ -0.03
CUEDC1-201ENST00000360238 RETNLBQ9BQ08 111 aa14.85□□□□□ -0.03
CUEDC1-201ENST00000360238 CHKB-CPT1BH3BT56 60 aa14.84□□□□□ -0.03
CUEDC1-201ENST00000360238 ACYP2P14621 99 aa14.84□□□□□ -0.03
CUEDC1-201ENST00000360238 DMAC1Q96GE9 116 aa14.84□□□□□ -0.03
CUEDC1-201ENST00000360238 SPAG11AQ6PDA7 123 aa14.84□□□□□ -0.03
CUEDC1-201ENST00000360238 LINC00304Q8N9R0 145 aa14.83□□□□□ -0.04
CUEDC1-201ENST00000360238 PRR26Q8N8Z3 221 aa14.8□□□□□ -0.04
CUEDC1-201ENST00000360238 A0A1B0GVY2 172 aa14.77□□□□□ -0.04
CUEDC1-201ENST00000360238 DYNC1H1Q14204 4646 aaKnown RBP14.75□□□□□ -0.05
CUEDC1-201ENST00000360238 SMR3BP02814 79 aaPredicted RBP14.71□□□□□ -0.05
CUEDC1-201ENST00000360238 IGKV2D-30A0A075B6S6 120 aa14.66□□□□□ -0.06
CUEDC1-201ENST00000360238 A6NED7 52 aa14.66□□□□□ -0.06
CUEDC1-201ENST00000360238 KRTAP10-4P60372 401 aaPredicted RBP14.65□□□□□ -0.06
CUEDC1-201ENST00000360238 A8MU10 97 aa14.62□□□□□ -0.07
CUEDC1-201ENST00000360238 APOBP04114 4563 aaKnown RBP14.61□□□□□ -0.07
CUEDC1-201ENST00000360238 PKHD1L1Q86WI1 4243 aa14.58□□□□□ -0.07
CUEDC1-201ENST00000360238 LCA10Q71F78 164 aa14.57□□□□□ -0.08
CUEDC1-201ENST00000360238 CDC42SE1Q9NRR8 79 aa14.54□□□□□ -0.08
CUEDC1-201ENST00000360238 C7orf65Q6ZTY9 151 aa14.53□□□□□ -0.08
CUEDC1-201ENST00000360238 RYR2Q92736 4967 aa14.5□□□□□ -0.09
CUEDC1-201ENST00000360238 FAT1Q14517 4588 aa14.49□□□□□ -0.09
CUEDC1-201ENST00000360238 SPINK7P58062 85 aa14.47□□□□□ -0.09
CUEDC1-201ENST00000360238 ATP11AUNQ6ZP68 121 aa14.46□□□□□ -0.09
CUEDC1-201ENST00000360238 C20orf166-AS1Q96NR2 134 aa14.44□□□□□ -0.1
CUEDC1-201ENST00000360238 A8MUU9 505 aa14.42□□□□□ -0.1
CUEDC1-201ENST00000360238 PMAIP1Q13794 54 aa14.39□□□□□ -0.11
CUEDC1-201ENST00000360238 C9orf92A6NGG3 77 aa14.38□□□□□ -0.11
CUEDC1-201ENST00000360238 SPTSSBQ8NFR3 76 aa14.37□□□□□ -0.11
CUEDC1-201ENST00000360238 A0A1B0GU69 56 aa14.36□□□□□ -0.11
CUEDC1-201ENST00000360238 Q8N1X5 172 aa14.27□□□□□ -0.13
CUEDC1-201ENST00000360238 KMT2CQ8NEZ4 4911 aaKnown RBP14.24□□□□□ -0.13
CUEDC1-201ENST00000360238 A6NN06 94 aa14.2□□□□□ -0.14
CUEDC1-201ENST00000360238 FLG2Q5D862 2391 aaPredicted RBP14.2□□□□□ -0.14
CUEDC1-201ENST00000360238 SPATA8Q6RVD6 105 aa14.09□□□□□ -0.15
CUEDC1-201ENST00000360238 KTN1-AS1Q86SY8 53 aa14.09□□□□□ -0.15
CUEDC1-201ENST00000360238 UQCR11O14957 56 aa14.09□□□□□ -0.15
CUEDC1-201ENST00000360238 KRTAP10-8P60410 259 aa14.08□□□□□ -0.16
CUEDC1-201ENST00000360238 Q5VSD8 79 aa14.07□□□□□ -0.16
CUEDC1-201ENST00000360238 TNXBP22105 4242 aa14.07□□□□□ -0.16
CUEDC1-201ENST00000360238 KRTAP3-1Q9BYR8 98 aa14.03□□□□□ -0.16
CUEDC1-201ENST00000360238 FAT3Q8TDW7 4589 aa14.02□□□□□ -0.17
CUEDC1-201ENST00000360238 MIR22HGQ0VDD5 57 aa14.01□□□□□ -0.17
CUEDC1-201ENST00000360238 HSPG2P98160 4391 aa14.01□□□□□ -0.17
CUEDC1-201ENST00000360238 SEC61GP60059 68 aa13.99□□□□□ -0.17
CUEDC1-201ENST00000360238 LRP1Q07954 4544 aaKnown RBP13.95□□□□□ -0.18
CUEDC1-201ENST00000360238 COX6B2Q6YFQ2 88 aa13.9□□□□□ -0.18
CUEDC1-201ENST00000360238 RYR1P21817 5038 aa13.87□□□□□ -0.19
CUEDC1-201ENST00000360238 RPL37P61927 97 aaKnown RBP13.82□□□□□ -0.2
CUEDC1-201ENST00000360238 RYR3Q15413 4870 aa13.81□□□□□ -0.2
CUEDC1-201ENST00000360238 XP32Q5T750 250 aa13.75□□□□□ -0.21
CUEDC1-201ENST00000360238 KRTAP17-1Q9BYP8 105 aa13.72□□□□□ -0.21
CUEDC1-201ENST00000360238 DMBT1Q9UGM3 2413 aaPredicted RBP13.69□□□□□ -0.22
CUEDC1-201ENST00000360238 MT1HL1P0DM35 61 aa13.66□□□□□ -0.22
CUEDC1-201ENST00000360238 A0A1B0GU33 70 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms