RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 ROMO1P60602 79 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 DEFB105AQ8NG35 78 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 OTOGQ6ZRI0 2925 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 WNK1Q9H4A3 2382 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 A0A1B0GU69 56 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 CASC10Q5T4H9 136 aa2.54□□□□□ -2
PTPN22-201ENST00000359785 NSD1Q96L73 2696 aaPredicted RBP2.53□□□□□ -2
PTPN22-201ENST00000359785 ROS1P08922 2347 aa2.53□□□□□ -2
PTPN22-201ENST00000359785 CUBNO60494 3623 aa2.53□□□□□ -2.01
PTPN22-201ENST00000359785 Q6ZSA8 131 aa2.53□□□□□ -2.01
PTPN22-201ENST00000359785 CRYBG3Q68DQ2 2970 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 PANO1I0J062 215 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 NBDYA0A0U1RRE5 68 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 PRLHP81277 87 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 KRTAP1-5Q9BYS1 174 aa2.52□□□□□ -2.01
PTPN22-201ENST00000359785 H0YAA0 97 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 PTPN13Q12923 2485 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 CREBBPQ92793 2442 aa2.51□□□□□ -2.01
PTPN22-201ENST00000359785 FLNAP21333 2647 aaKnown RBP2.51□□□□□ -2.01
PTPN22-201ENST00000359785 FBN1P35555 2871 aaKnown RBP2.51□□□□□ -2.01
PTPN22-201ENST00000359785 CSMD3Q7Z407 3707 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 HIVEP2P31629 2446 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 TEX15Q9BXT5 2789 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
PTPN22-201ENST00000359785 DEFB116Q30KQ4 102 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 ABCA12Q86UK0 2595 aa2.5□□□□□ -2.01
PTPN22-201ENST00000359785 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.01
PTPN22-201ENST00000359785 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
PTPN22-201ENST00000359785 APOBP04114 4563 aaKnown RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 GCN1Q92616 2671 aaKnown RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 RP1L1Q8IWN7 2480 aaPredicted RBP2.49□□□□□ -2.01
PTPN22-201ENST00000359785 BAHCC1Q9P281 2608 aa2.49□□□□□ -2.01
PTPN22-201ENST00000359785 KRTAP15-1Q3LI76 137 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 HELZ2Q9BYK8 2649 aaKnown RBP2.48□□□□□ -2.01
PTPN22-201ENST00000359785 DNAH5Q8TE73 4624 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 PRR4Q16378 134 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 NBASA2RRP1 2371 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 H3BS24 57 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 COL12A1Q99715 3063 aa2.48□□□□□ -2.01
PTPN22-201ENST00000359785 TEP1Q99973 2627 aaKnown RBP2.48□□□□□ -2.01
PTPN22-201ENST00000359785 LRRK2Q5S007 2527 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 EPG5Q9HCE0 2579 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
PTPN22-201ENST00000359785 PCOTHQ58A44 107 aa2.47□□□□□ -2.01
PTPN22-201ENST00000359785 TPRP12270 2363 aaKnown RBP2.46□□□□□ -2.01
PTPN22-201ENST00000359785 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
PTPN22-201ENST00000359785 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
PTPN22-201ENST00000359785 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
PTPN22-201ENST00000359785 HIVEP1P15822 2718 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 CSPG4Q6UVK1 2322 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 CDK2AP2O75956 126 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 UBE2DNLQ8IWF7 75 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 A0A087WTM6 91 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 DEFB4AO15263 64 aa2.45□□□□□ -2.02
PTPN22-201ENST00000359785 SPTAN1Q13813 2472 aaKnown RBP2.44□□□□□ -2.02
PTPN22-201ENST00000359785 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 SORL1Q92673 2214 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 A0A0G2JQZ4 141 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 C1orf134Q5TEV5 83 aa2.44□□□□□ -2.02
PTPN22-201ENST00000359785 P0C880 135 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 HTN3P15516 51 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 MYO9AB2RTY4 2548 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 ITPR2Q14571 2701 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 SPINK1P00995 79 aa2.43□□□□□ -2.02
PTPN22-201ENST00000359785 MYCBP2O75592 4640 aa2.42□□□□□ -2.02
PTPN22-201ENST00000359785 CSMD2Q7Z408 3487 aa2.42□□□□□ -2.02
PTPN22-201ENST00000359785 FASNP49327 2511 aaKnown RBP2.41□□□□□ -2.02
PTPN22-201ENST00000359785 FAT3Q8TDW7 4589 aa2.41□□□□□ -2.02
PTPN22-201ENST00000359785 A0A1B0GVY2 172 aa2.41□□□□□ -2.02
PTPN22-201ENST00000359785 KRTAP23-1A1A580 65 aa2.41□□□□□ -2.02
PTPN22-201ENST00000359785 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
PTPN22-201ENST00000359785 C2CD3Q4AC94 2353 aa2.4□□□□□ -2.02
PTPN22-201ENST00000359785 MAST4O15021 2626 aa2.4□□□□□ -2.02
PTPN22-201ENST00000359785 NOTCH2Q04721 2471 aa2.4□□□□□ -2.03
PTPN22-201ENST00000359785 KRTAP10-6P60371 365 aaPredicted RBP2.4□□□□□ -2.03
PTPN22-201ENST00000359785 NF1P21359 2839 aa2.39□□□□□ -2.03
PTPN22-201ENST00000359785 A0A1B0GU33 70 aa2.39□□□□□ -2.03
PTPN22-201ENST00000359785 POLQO75417 2590 aa2.39□□□□□ -2.03
PTPN22-201ENST00000359785 ZANQ9Y493 2812 aa2.38□□□□□ -2.03
PTPN22-201ENST00000359785 ZFYVE26Q68DK2 2539 aa2.38□□□□□ -2.03
PTPN22-201ENST00000359785 SPINK6Q6UWN8 80 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 VWFP04275 2813 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 F8P00451 2351 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 STARD9Q9P2P6 4700 aa2.36□□□□□ -2.03
PTPN22-201ENST00000359785 LRP1Q07954 4544 aaKnown RBP2.36□□□□□ -2.03
PTPN22-201ENST00000359785 SPG11Q96JI7 2443 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 FAT1Q14517 4588 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 CENPEQ02224 2701 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 IGLV9-49A0A0B4J1Y8 123 aa2.35□□□□□ -2.03
PTPN22-201ENST00000359785 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
PTPN22-201ENST00000359785 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms