RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 Q8NDZ9 215 aa10.12□□□□□ -0.79
RUNX2-201ENST00000359524 HIVEP1P15822 2718 aa10.11□□□□□ -0.79
RUNX2-201ENST00000359524 ASH1LQ9NR48 2969 aaKnown RBP10.08□□□□□ -0.8
RUNX2-201ENST00000359524 M0QZ58 72 aa10.06□□□□□ -0.8
RUNX2-201ENST00000359524 NSD1Q96L73 2696 aaPredicted RBP10.05□□□□□ -0.8
RUNX2-201ENST00000359524 PLAC4Q8WY50 150 aa10.04□□□□□ -0.8
RUNX2-201ENST00000359524 NF1P21359 2839 aa10.04□□□□□ -0.8
RUNX2-201ENST00000359524 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
RUNX2-201ENST00000359524 FBN2P35556 2912 aa10.01□□□□□ -0.81
RUNX2-201ENST00000359524 Q5VSD8 79 aa10.01□□□□□ -0.81
RUNX2-201ENST00000359524 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
RUNX2-201ENST00000359524 LCE6AA0A183 80 aa10□□□□□ -0.81
RUNX2-201ENST00000359524 SMG1Q96Q15 3661 aaKnown RBP9.98□□□□□ -0.81
RUNX2-201ENST00000359524 SPATA8Q6RVD6 105 aa9.97□□□□□ -0.81
RUNX2-201ENST00000359524 MXRA5Q9NR99 2828 aa9.96□□□□□ -0.81
RUNX2-201ENST00000359524 KRTAP4-16G5E9R7 235 aaPredicted RBP9.95□□□□□ -0.82
RUNX2-201ENST00000359524 PANO1I0J062 215 aa9.93□□□□□ -0.82
RUNX2-201ENST00000359524 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
RUNX2-201ENST00000359524 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
RUNX2-201ENST00000359524 ADM2Q7Z4H4 148 aa9.9□□□□□ -0.83
RUNX2-201ENST00000359524 NBEAL1Q6ZS30 2694 aa9.87□□□□□ -0.83
RUNX2-201ENST00000359524 NIPBLQ6KC79 2804 aaeCLIP9.87□□□□□ -0.83
RUNX2-201ENST00000359524 KMT2BQ9UMN6 2715 aaPredicted RBP9.83□□□□□ -0.84
RUNX2-201ENST00000359524 A0A087X002 238 aa9.82□□□□□ -0.84
RUNX2-201ENST00000359524 KRTAP16-1A8MUX0 517 aa9.81□□□□□ -0.84
RUNX2-201ENST00000359524 CSMD1Q96PZ7 3565 aa9.77□□□□□ -0.84
RUNX2-201ENST00000359524 A6NN06 94 aa9.77□□□□□ -0.84
RUNX2-201ENST00000359524 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
RUNX2-201ENST00000359524 KRTAP25-1Q3LHN0 102 aa9.76□□□□□ -0.85
RUNX2-201ENST00000359524 TENM4Q6N022 2769 aa9.75□□□□□ -0.85
RUNX2-201ENST00000359524 A8MU10 97 aa9.74□□□□□ -0.85
RUNX2-201ENST00000359524 CELSR1Q9NYQ6 3014 aa9.74□□□□□ -0.85
RUNX2-201ENST00000359524 BSNQ9UPA5 3926 aa9.72□□□□□ -0.85
RUNX2-201ENST00000359524 SPENQ96T58 3664 aaKnown RBP9.72□□□□□ -0.85
RUNX2-201ENST00000359524 SVEP1Q4LDE5 3571 aa9.68□□□□□ -0.86
RUNX2-201ENST00000359524 PDZD2O15018 2839 aa9.66□□□□□ -0.86
RUNX2-201ENST00000359524 A8MUU9 505 aa9.63□□□□□ -0.87
RUNX2-201ENST00000359524 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
RUNX2-201ENST00000359524 FLG2Q5D862 2391 aaPredicted RBP9.62□□□□□ -0.87
RUNX2-201ENST00000359524 STAB2Q8WWQ8 2551 aa9.57□□□□□ -0.88
RUNX2-201ENST00000359524 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
RUNX2-201ENST00000359524 NBPF19A0A087WUL8 3843 aa9.54□□□□□ -0.88
RUNX2-201ENST00000359524 TNP1P09430 55 aa9.53□□□□□ -0.88
RUNX2-201ENST00000359524 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
RUNX2-201ENST00000359524 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
RUNX2-201ENST00000359524 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
RUNX2-201ENST00000359524 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
RUNX2-201ENST00000359524 OTOGQ6ZRI0 2925 aa9.46□□□□□ -0.9
RUNX2-201ENST00000359524 CSMD2Q7Z408 3487 aa9.44□□□□□ -0.9
RUNX2-201ENST00000359524 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
RUNX2-201ENST00000359524 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
RUNX2-201ENST00000359524 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
RUNX2-201ENST00000359524 VWFP04275 2813 aa9.37□□□□□ -0.91
RUNX2-201ENST00000359524 TENM3Q9P273 2699 aa9.37□□□□□ -0.91
RUNX2-201ENST00000359524 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
RUNX2-201ENST00000359524 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
RUNX2-201ENST00000359524 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
RUNX2-201ENST00000359524 CUBNO60494 3623 aa9.25□□□□□ -0.93
RUNX2-201ENST00000359524 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
RUNX2-201ENST00000359524 ANK3Q12955 4377 aaKnown RBP9.23□□□□□ -0.93
RUNX2-201ENST00000359524 FBN1P35555 2871 aaKnown RBP9.23□□□□□ -0.93
RUNX2-201ENST00000359524 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
RUNX2-201ENST00000359524 VPS13CQ709C8 3753 aa9.14□□□□□ -0.95
RUNX2-201ENST00000359524 TRRAPQ9Y4A5 3859 aa9.04□□□□□ -0.96
RUNX2-201ENST00000359524 P0C880 135 aa9□□□□□ -0.97
RUNX2-201ENST00000359524 XP32Q5T750 250 aa8.98□□□□□ -0.97
RUNX2-201ENST00000359524 PRO2289Q9P1D8 64 aa8.97□□□□□ -0.97
RUNX2-201ENST00000359524 KRTAP10-8P60410 259 aa8.96□□□□□ -0.97
RUNX2-201ENST00000359524 TPRXLQ17RH7 258 aa8.96□□□□□ -0.97
RUNX2-201ENST00000359524 PKD1L1Q8TDX9 2849 aa8.96□□□□□ -0.98
RUNX2-201ENST00000359524 ZNF469Q96JG9 3925 aaPredicted RBP8.93□□□□□ -0.98
RUNX2-201ENST00000359524 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
RUNX2-201ENST00000359524 TENM2Q9NT68 2774 aa8.9□□□□□ -0.99
RUNX2-201ENST00000359524 TGP01266 2768 aa8.88□□□□□ -0.99
RUNX2-201ENST00000359524 H0YAA0 97 aa8.86□□□□□ -0.99
RUNX2-201ENST00000359524 AKAP9Q99996 3911 aa8.73□□□□□ -1.01
RUNX2-201ENST00000359524 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
RUNX2-201ENST00000359524 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
RUNX2-201ENST00000359524 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
RUNX2-201ENST00000359524 HUWE1Q7Z6Z7 4374 aaKnown RBP8.49□□□□□ -1.05
RUNX2-201ENST00000359524 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
RUNX2-201ENST00000359524 FBN3Q75N90 2809 aa8.44□□□□□ -1.06
RUNX2-201ENST00000359524 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
RUNX2-201ENST00000359524 SRRM2Q9UQ35 2752 aaKnown RBP8.37□□□□□ -1.07
RUNX2-201ENST00000359524 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
RUNX2-201ENST00000359524 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
RUNX2-201ENST00000359524 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
RUNX2-201ENST00000359524 KRTAP12-1P59990 96 aa8.21□□□□□ -1.09
RUNX2-201ENST00000359524 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
RUNX2-201ENST00000359524 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
RUNX2-201ENST00000359524 INE1O15225 51 aa8.06□□□□□ -1.12
RUNX2-201ENST00000359524 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
RUNX2-201ENST00000359524 KRTAP3-1Q9BYR8 98 aa7.94□□□□□ -1.14
RUNX2-201ENST00000359524 DNAH1Q9P2D7 4330 aa7.94□□□□□ -1.14
RUNX2-201ENST00000359524 DNAH10Q8IVF4 4471 aa7.94□□□□□ -1.14
RUNX2-201ENST00000359524 ANK2Q01484 3957 aa7.9□□□□□ -1.14
RUNX2-201ENST00000359524 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
RUNX2-201ENST00000359524 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
RUNX2-201ENST00000359524 KRTAP10-4P60372 401 aaPredicted RBP7.88□□□□□ -1.15
RUNX2-201ENST00000359524 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms