RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 HIVEP1P15822 2718 aa9.86□□□□□ -0.83
LMBR1-202ENST00000359422 Q5XG85 94 aa9.83□□□□□ -0.84
LMBR1-202ENST00000359422 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
LMBR1-202ENST00000359422 PRAC1Q96KF2 57 aa9.78□□□□□ -0.84
LMBR1-202ENST00000359422 S4R3F8 94 aa9.77□□□□□ -0.85
LMBR1-202ENST00000359422 Q5VV11 94 aa9.77□□□□□ -0.85
LMBR1-202ENST00000359422 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
LMBR1-202ENST00000359422 TENM4Q6N022 2769 aa9.75□□□□□ -0.85
LMBR1-202ENST00000359422 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
LMBR1-202ENST00000359422 R4GN34 69 aa9.73□□□□□ -0.85
LMBR1-202ENST00000359422 MXRA5Q9NR99 2828 aa9.72□□□□□ -0.85
LMBR1-202ENST00000359422 PANO1I0J062 215 aa9.7□□□□□ -0.86
LMBR1-202ENST00000359422 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
LMBR1-202ENST00000359422 Q5VSD8 79 aa9.68□□□□□ -0.86
LMBR1-202ENST00000359422 KRTAP4-16G5E9R7 235 aaPredicted RBP9.67□□□□□ -0.86
LMBR1-202ENST00000359422 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
LMBR1-202ENST00000359422 APCP25054 2843 aa9.66□□□□□ -0.86
LMBR1-202ENST00000359422 NIPBLQ6KC79 2804 aaeCLIP9.65□□□□□ -0.86
LMBR1-202ENST00000359422 LCE6AA0A183 80 aa9.64□□□□□ -0.87
LMBR1-202ENST00000359422 OXTP01178 125 aa9.63□□□□□ -0.87
LMBR1-202ENST00000359422 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
LMBR1-202ENST00000359422 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
LMBR1-202ENST00000359422 A0A087X002 238 aa9.57□□□□□ -0.88
LMBR1-202ENST00000359422 Q6ZR54 194 aa9.56□□□□□ -0.88
LMBR1-202ENST00000359422 TENM3Q9P273 2699 aa9.55□□□□□ -0.88
LMBR1-202ENST00000359422 H3BS24 57 aa9.55□□□□□ -0.88
LMBR1-202ENST00000359422 M0QZ58 72 aa9.52□□□□□ -0.89
LMBR1-202ENST00000359422 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
LMBR1-202ENST00000359422 H1FX-AS1Q4G0G2 97 aa9.49□□□□□ -0.89
LMBR1-202ENST00000359422 ROMO1P60602 79 aa9.46□□□□□ -0.89
LMBR1-202ENST00000359422 ZFHX3Q15911 3703 aa9.46□□□□□ -0.9
LMBR1-202ENST00000359422 A0A0A0MQY5 61 aa9.44□□□□□ -0.9
LMBR1-202ENST00000359422 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
LMBR1-202ENST00000359422 SPATA8Q6RVD6 105 aa9.44□□□□□ -0.9
LMBR1-202ENST00000359422 BSNQ9UPA5 3926 aa9.43□□□□□ -0.9
LMBR1-202ENST00000359422 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
LMBR1-202ENST00000359422 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
LMBR1-202ENST00000359422 Q6ZRN7 208 aaPredicted RBP9.36□□□□□ -0.91
LMBR1-202ENST00000359422 VPS13CQ709C8 3753 aa9.35□□□□□ -0.91
LMBR1-202ENST00000359422 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
LMBR1-202ENST00000359422 ASB16-AS1Q495Z4 193 aa9.31□□□□□ -0.92
LMBR1-202ENST00000359422 PLAC4Q8WY50 150 aa9.27□□□□□ -0.93
LMBR1-202ENST00000359422 PDZD2O15018 2839 aa9.26□□□□□ -0.93
LMBR1-202ENST00000359422 VWFP04275 2813 aa9.25□□□□□ -0.93
LMBR1-202ENST00000359422 TENM1Q9UKZ4 2725 aa9.25□□□□□ -0.93
LMBR1-202ENST00000359422 KRTAP13-2Q52LG2 175 aa9.24□□□□□ -0.93
LMBR1-202ENST00000359422 RPS29P62273 56 aaKnown RBP9.22□□□□□ -0.93
LMBR1-202ENST00000359422 FBN1P35555 2871 aaKnown RBP9.22□□□□□ -0.93
LMBR1-202ENST00000359422 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
LMBR1-202ENST00000359422 A8MU10 97 aa9.19□□□□□ -0.94
LMBR1-202ENST00000359422 A8MUU9 505 aa9.13□□□□□ -0.95
LMBR1-202ENST00000359422 NBPF19A0A087WUL8 3843 aa9.11□□□□□ -0.95
LMBR1-202ENST00000359422 A6NN06 94 aa9.07□□□□□ -0.96
LMBR1-202ENST00000359422 PKD1L1Q8TDX9 2849 aa9.05□□□□□ -0.96
LMBR1-202ENST00000359422 OTOGQ6ZRI0 2925 aa9.05□□□□□ -0.96
LMBR1-202ENST00000359422 KRTAP25-1Q3LHN0 102 aa9.03□□□□□ -0.96
LMBR1-202ENST00000359422 C20orf166-AS1Q96NR2 134 aa9.03□□□□□ -0.96
LMBR1-202ENST00000359422 TENM2Q9NT68 2774 aa9.02□□□□□ -0.96
LMBR1-202ENST00000359422 KRTAP16-1A8MUX0 517 aa8.98□□□□□ -0.97
LMBR1-202ENST00000359422 NDUFAF8A1L188 74 aa8.88□□□□□ -0.99
LMBR1-202ENST00000359422 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
LMBR1-202ENST00000359422 TNP1P09430 55 aa8.81□□□□□ -1
LMBR1-202ENST00000359422 TGP01266 2768 aa8.8□□□□□ -1
LMBR1-202ENST00000359422 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
LMBR1-202ENST00000359422 KRTAP1-4P0C5Y4 121 aa8.78□□□□□ -1
LMBR1-202ENST00000359422 TRRAPQ9Y4A5 3859 aa8.76□□□□□ -1.01
LMBR1-202ENST00000359422 XP32Q5T750 250 aa8.7□□□□□ -1.02
LMBR1-202ENST00000359422 AKAP9Q99996 3911 aa8.7□□□□□ -1.02
LMBR1-202ENST00000359422 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
LMBR1-202ENST00000359422 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.03
LMBR1-202ENST00000359422 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
LMBR1-202ENST00000359422 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
LMBR1-202ENST00000359422 H0YAA0 97 aa8.54□□□□□ -1.04
LMBR1-202ENST00000359422 PP632Q6XCG6 107 aa8.53□□□□□ -1.04
LMBR1-202ENST00000359422 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
LMBR1-202ENST00000359422 P0C880 135 aa8.42□□□□□ -1.06
LMBR1-202ENST00000359422 CSMD3Q7Z407 3707 aa8.4□□□□□ -1.06
LMBR1-202ENST00000359422 KRTAP10-10P60014 251 aa8.39□□□□□ -1.07
LMBR1-202ENST00000359422 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
LMBR1-202ENST00000359422 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
LMBR1-202ENST00000359422 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
LMBR1-202ENST00000359422 ANK3Q12955 4377 aaKnown RBP8.31□□□□□ -1.08
LMBR1-202ENST00000359422 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.1
LMBR1-202ENST00000359422 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
LMBR1-202ENST00000359422 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
LMBR1-202ENST00000359422 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
LMBR1-202ENST00000359422 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.15
LMBR1-202ENST00000359422 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
LMBR1-202ENST00000359422 ANK2Q01484 3957 aa7.77□□□□□ -1.17
LMBR1-202ENST00000359422 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
LMBR1-202ENST00000359422 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
LMBR1-202ENST00000359422 DNAH10Q8IVF4 4471 aa7.64□□□□□ -1.19
LMBR1-202ENST00000359422 LYSTQ99698 3801 aa7.64□□□□□ -1.19
LMBR1-202ENST00000359422 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
LMBR1-202ENST00000359422 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
LMBR1-202ENST00000359422 PLECQ15149 4684 aaKnown RBP7.44□□□□□ -1.22
LMBR1-202ENST00000359422 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
LMBR1-202ENST00000359422 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
LMBR1-202ENST00000359422 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
LMBR1-202ENST00000359422 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms