RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
RFX3-202ENST00000358730 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
RFX3-202ENST00000358730 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
RFX3-202ENST00000358730 IGLV7-46A0A075B6I9 117 aa5.09□□□□□ -1.6
RFX3-202ENST00000358730 A0A087X002 238 aa5.09□□□□□ -1.6
RFX3-202ENST00000358730 A8MUN3 132 aa5.09□□□□□ -1.6
RFX3-202ENST00000358730 CD164Q04900 197 aa5.09□□□□□ -1.6
RFX3-202ENST00000358730 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.6
RFX3-202ENST00000358730 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
RFX3-202ENST00000358730 LY6G6CO95867 125 aa5.08□□□□□ -1.6
RFX3-202ENST00000358730 COA5Q86WW8 74 aa5.08□□□□□ -1.6
RFX3-202ENST00000358730 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
RFX3-202ENST00000358730 C1orf195Q5TG92 126 aa5.05□□□□□ -1.6
RFX3-202ENST00000358730 Q5VV11 94 aa5.05□□□□□ -1.6
RFX3-202ENST00000358730 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
RFX3-202ENST00000358730 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
RFX3-202ENST00000358730 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
RFX3-202ENST00000358730 KRTAP10-2P60368 255 aa5.03□□□□□ -1.6
RFX3-202ENST00000358730 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
RFX3-202ENST00000358730 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
RFX3-202ENST00000358730 SSBP3-AS1Q7Z2R9 100 aa5.01□□□□□ -1.61
RFX3-202ENST00000358730 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
RFX3-202ENST00000358730 Q5W150 140 aa5.01□□□□□ -1.61
RFX3-202ENST00000358730 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
RFX3-202ENST00000358730 C8orf87E5RJ46 101 aa4.99□□□□□ -1.61
RFX3-202ENST00000358730 DNHD1Q96M86 4753 aa4.99□□□□□ -1.61
RFX3-202ENST00000358730 HRES1P13985 223 aa4.99□□□□□ -1.61
RFX3-202ENST00000358730 DNAH5Q8TE73 4624 aa4.99□□□□□ -1.61
RFX3-202ENST00000358730 KRTAP13-3Q3SY46 172 aa4.98□□□□□ -1.61
RFX3-202ENST00000358730 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
RFX3-202ENST00000358730 A8MU10 97 aa4.98□□□□□ -1.61
RFX3-202ENST00000358730 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
RFX3-202ENST00000358730 Q75L30 129 aa4.97□□□□□ -1.61
RFX3-202ENST00000358730 LINC00313P59037 77 aa4.96□□□□□ -1.61
RFX3-202ENST00000358730 KRTAP10-1P60331 282 aa4.96□□□□□ -1.61
RFX3-202ENST00000358730 Q6ZSA8 131 aa4.95□□□□□ -1.62
RFX3-202ENST00000358730 A6NED7 52 aa4.95□□□□□ -1.62
RFX3-202ENST00000358730 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
RFX3-202ENST00000358730 RETNLBQ9BQ08 111 aa4.94□□□□□ -1.62
RFX3-202ENST00000358730 FAM229AH3BQW9 127 aa4.93□□□□□ -1.62
RFX3-202ENST00000358730 PKD1P98161 4303 aa4.91□□□□□ -1.62
RFX3-202ENST00000358730 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
RFX3-202ENST00000358730 LCA10Q71F78 164 aa4.91□□□□□ -1.62
RFX3-202ENST00000358730 PRR26Q8N8Z3 221 aa4.91□□□□□ -1.62
RFX3-202ENST00000358730 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
RFX3-202ENST00000358730 ACYP2P14621 99 aa4.91□□□□□ -1.62
RFX3-202ENST00000358730 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.62
RFX3-202ENST00000358730 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
RFX3-202ENST00000358730 HYDINQ4G0P3 5121 aa4.89□□□□□ -1.63
RFX3-202ENST00000358730 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
RFX3-202ENST00000358730 DMAC1Q96GE9 116 aa4.89□□□□□ -1.63
RFX3-202ENST00000358730 FAT2Q9NYQ8 4349 aa4.89□□□□□ -1.63
RFX3-202ENST00000358730 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
RFX3-202ENST00000358730 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
RFX3-202ENST00000358730 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
RFX3-202ENST00000358730 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
RFX3-202ENST00000358730 SPINK7P58062 85 aa4.87□□□□□ -1.63
RFX3-202ENST00000358730 TYMSOSQ8TAI1 123 aa4.86□□□□□ -1.63
RFX3-202ENST00000358730 ATP11AUNQ6ZP68 121 aa4.86□□□□□ -1.63
RFX3-202ENST00000358730 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
RFX3-202ENST00000358730 SPINK1P00995 79 aa4.83□□□□□ -1.64
RFX3-202ENST00000358730 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
RFX3-202ENST00000358730 LINC00304Q8N9R0 145 aa4.8□□□□□ -1.64
RFX3-202ENST00000358730 A6NN06 94 aa4.8□□□□□ -1.64
RFX3-202ENST00000358730 C7orf65Q6ZTY9 151 aa4.8□□□□□ -1.64
RFX3-202ENST00000358730 A0A1B0GU69 56 aa4.79□□□□□ -1.64
RFX3-202ENST00000358730 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
RFX3-202ENST00000358730 SMR3BP02814 79 aaPredicted RBP4.76□□□□□ -1.65
RFX3-202ENST00000358730 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
RFX3-202ENST00000358730 SEC61GP60059 68 aa4.75□□□□□ -1.65
RFX3-202ENST00000358730 LCE2BO14633 110 aa4.75□□□□□ -1.65
RFX3-202ENST00000358730 Q8N1X5 172 aa4.73□□□□□ -1.65
RFX3-202ENST00000358730 C9orf92A6NGG3 77 aa4.71□□□□□ -1.65
RFX3-202ENST00000358730 SACSQ9NZJ4 4579 aa4.71□□□□□ -1.65
RFX3-202ENST00000358730 UQCR11O14957 56 aa4.7□□□□□ -1.66
RFX3-202ENST00000358730 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
RFX3-202ENST00000358730 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
RFX3-202ENST00000358730 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
RFX3-202ENST00000358730 KRTAP21-3Q3LHN1 58 aa4.68□□□□□ -1.66
RFX3-202ENST00000358730 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
RFX3-202ENST00000358730 A0A1B0GVY2 172 aa4.67□□□□□ -1.66
RFX3-202ENST00000358730 A8MUU9 505 aa4.67□□□□□ -1.66
RFX3-202ENST00000358730 FAT1Q14517 4588 aa4.66□□□□□ -1.66
RFX3-202ENST00000358730 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
RFX3-202ENST00000358730 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
RFX3-202ENST00000358730 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
RFX3-202ENST00000358730 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
RFX3-202ENST00000358730 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
RFX3-202ENST00000358730 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
RFX3-202ENST00000358730 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
RFX3-202ENST00000358730 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
RFX3-202ENST00000358730 LCE2CQ5TA81 110 aa4.57□□□□□ -1.68
RFX3-202ENST00000358730 RYR2Q92736 4967 aa4.55□□□□□ -1.68
RFX3-202ENST00000358730 H0YAA0 97 aa4.54□□□□□ -1.68
RFX3-202ENST00000358730 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
RFX3-202ENST00000358730 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
RFX3-202ENST00000358730 KMT2CQ8NEZ4 4911 aaKnown RBP4.52□□□□□ -1.69
RFX3-202ENST00000358730 A0A1B0GU33 70 aa4.52□□□□□ -1.69
RFX3-202ENST00000358730 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
RFX3-202ENST00000358730 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms