RNA–Protein interactions for RNA: ENST00000358338.7

CACNA1E-202, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 14,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-202ENST00000358338 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
CACNA1E-202ENST00000358338 TGP01266 2768 aa4.02□□□□□ -1.77
CACNA1E-202ENST00000358338 COL6A3P12111 3177 aa4.02□□□□□ -1.77
CACNA1E-202ENST00000358338 UNC80Q8N2C7 3258 aa4.01□□□□□ -1.77
CACNA1E-202ENST00000358338 SRRM2Q9UQ35 2752 aaKnown RBP4.01□□□□□ -1.77
CACNA1E-202ENST00000358338 BRCA2P51587 3418 aa4□□□□□ -1.77
CACNA1E-202ENST00000358338 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
CACNA1E-202ENST00000358338 EYSQ5T1H1 3165 aa3.98□□□□□ -1.77
CACNA1E-202ENST00000358338 VWFP04275 2813 aa3.98□□□□□ -1.77
CACNA1E-202ENST00000358338 HRNRQ86YZ3 2850 aaPredicted RBP3.97□□□□□ -1.77
CACNA1E-202ENST00000358338 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
CACNA1E-202ENST00000358338 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
CACNA1E-202ENST00000358338 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
CACNA1E-202ENST00000358338 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
CACNA1E-202ENST00000358338 R4GN34 69 aa3.95□□□□□ -1.78
CACNA1E-202ENST00000358338 PANO1I0J062 215 aa3.93□□□□□ -1.78
CACNA1E-202ENST00000358338 M0QZ58 72 aa3.92□□□□□ -1.78
CACNA1E-202ENST00000358338 FBN1P35555 2871 aaKnown RBP3.91□□□□□ -1.78
CACNA1E-202ENST00000358338 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.78
CACNA1E-202ENST00000358338 Q5VSD8 79 aa3.88□□□□□ -1.79
CACNA1E-202ENST00000358338 M0R2T5 61 aa3.87□□□□□ -1.79
CACNA1E-202ENST00000358338 KRTAP10-1P60331 282 aa3.87□□□□□ -1.79
CACNA1E-202ENST00000358338 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
CACNA1E-202ENST00000358338 VCANP13611 3396 aa3.85□□□□□ -1.79
CACNA1E-202ENST00000358338 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
CACNA1E-202ENST00000358338 KRTAP10-2P60368 255 aa3.84□□□□□ -1.79
CACNA1E-202ENST00000358338 PP632Q6XCG6 107 aa3.84□□□□□ -1.8
CACNA1E-202ENST00000358338 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
CACNA1E-202ENST00000358338 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
CACNA1E-202ENST00000358338 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
CACNA1E-202ENST00000358338 CDH23Q9H251 3354 aa3.79□□□□□ -1.8
CACNA1E-202ENST00000358338 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
CACNA1E-202ENST00000358338 KRTAP11-1Q8IUC1 163 aa3.78□□□□□ -1.8
CACNA1E-202ENST00000358338 USP34Q70CQ2 3546 aa3.76□□□□□ -1.81
CACNA1E-202ENST00000358338 SZT2Q5T011 3432 aa3.76□□□□□ -1.81
CACNA1E-202ENST00000358338 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
CACNA1E-202ENST00000358338 SPEGQ15772 3267 aa3.75□□□□□ -1.81
CACNA1E-202ENST00000358338 A8MUU9 505 aa3.75□□□□□ -1.81
CACNA1E-202ENST00000358338 KRTAP7-1Q8IUC3 87 aa3.75□□□□□ -1.81
CACNA1E-202ENST00000358338 LOC400499M0QZD8 3231 aa3.74□□□□□ -1.81
CACNA1E-202ENST00000358338 KRTAP21-3Q3LHN1 58 aa3.73□□□□□ -1.81
CACNA1E-202ENST00000358338 DNAH14Q0VDD8 3507 aa3.73□□□□□ -1.81
CACNA1E-202ENST00000358338 MYO15AQ9UKN7 3530 aa3.72□□□□□ -1.81
CACNA1E-202ENST00000358338 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.82
CACNA1E-202ENST00000358338 MEGF8Q7Z7M0 2845 aa3.69□□□□□ -1.82
CACNA1E-202ENST00000358338 DCHS1Q96JQ0 3298 aa3.68□□□□□ -1.82
CACNA1E-202ENST00000358338 TNP1P09430 55 aa3.67□□□□□ -1.82
CACNA1E-202ENST00000358338 SPTBN5Q9NRC6 3674 aaKnown RBP3.67□□□□□ -1.82
CACNA1E-202ENST00000358338 FBN3Q75N90 2809 aa3.65□□□□□ -1.83
CACNA1E-202ENST00000358338 A8MU10 97 aa3.65□□□□□ -1.83
CACNA1E-202ENST00000358338 OTOGQ6ZRI0 2925 aa3.65□□□□□ -1.83
CACNA1E-202ENST00000358338 ZFHX3Q15911 3703 aa3.64□□□□□ -1.83
CACNA1E-202ENST00000358338 P0C880 135 aa3.63□□□□□ -1.83
CACNA1E-202ENST00000358338 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
CACNA1E-202ENST00000358338 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
CACNA1E-202ENST00000358338 H0YAA0 97 aa3.57□□□□□ -1.84
CACNA1E-202ENST00000358338 XP32Q5T750 250 aa3.54□□□□□ -1.84
CACNA1E-202ENST00000358338 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
CACNA1E-202ENST00000358338 AKAP9Q99996 3911 aa3.51□□□□□ -1.85
CACNA1E-202ENST00000358338 NBPF19A0A087WUL8 3843 aa3.51□□□□□ -1.85
CACNA1E-202ENST00000358338 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
CACNA1E-202ENST00000358338 KRTAP13-3Q3SY46 172 aa3.48□□□□□ -1.85
CACNA1E-202ENST00000358338 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
CACNA1E-202ENST00000358338 LAMA5O15230 3695 aa3.44□□□□□ -1.86
CACNA1E-202ENST00000358338 WDFY3Q8IZQ1 3526 aa3.38□□□□□ -1.87
CACNA1E-202ENST00000358338 ZFHX4Q86UP3 3567 aa3.38□□□□□ -1.87
CACNA1E-202ENST00000358338 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
CACNA1E-202ENST00000358338 INE1O15225 51 aa3.36□□□□□ -1.87
CACNA1E-202ENST00000358338 RELNP78509 3460 aa3.35□□□□□ -1.87
CACNA1E-202ENST00000358338 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
CACNA1E-202ENST00000358338 A0A1B0GVY2 172 aa3.32□□□□□ -1.88
CACNA1E-202ENST00000358338 SPENQ96T58 3664 aaKnown RBP3.32□□□□□ -1.88
CACNA1E-202ENST00000358338 SMG1Q96Q15 3661 aaKnown RBP3.32□□□□□ -1.88
CACNA1E-202ENST00000358338 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
CACNA1E-202ENST00000358338 VPS13CQ709C8 3753 aa3.29□□□□□ -1.88
CACNA1E-202ENST00000358338 KRTAP12-2P59991 146 aa3.28□□□□□ -1.88
CACNA1E-202ENST00000358338 DMDP11532 3685 aa3.28□□□□□ -1.88
CACNA1E-202ENST00000358338 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
CACNA1E-202ENST00000358338 KRTAP23-1A1A580 65 aa3.27□□□□□ -1.89
CACNA1E-202ENST00000358338 DNAH1Q9P2D7 4330 aa3.27□□□□□ -1.89
CACNA1E-202ENST00000358338 ASPMQ8IZT6 3477 aa3.27□□□□□ -1.89
CACNA1E-202ENST00000358338 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
CACNA1E-202ENST00000358338 CSMD1Q96PZ7 3565 aa3.23□□□□□ -1.89
CACNA1E-202ENST00000358338 ANK2Q01484 3957 aa3.23□□□□□ -1.89
CACNA1E-202ENST00000358338 MUC3AQ02505 3323 aa3.22□□□□□ -1.89
CACNA1E-202ENST00000358338 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
CACNA1E-202ENST00000358338 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
CACNA1E-202ENST00000358338 BSNQ9UPA5 3926 aa3.18□□□□□ -1.9
CACNA1E-202ENST00000358338 ZNF469Q96JG9 3925 aaPredicted RBP3.18□□□□□ -1.9
CACNA1E-202ENST00000358338 CUBNO60494 3623 aa3.17□□□□□ -1.9
CACNA1E-202ENST00000358338 ANK3Q12955 4377 aaKnown RBP3.17□□□□□ -1.9
CACNA1E-202ENST00000358338 ALMS1Q8TCU4 4167 aa3.16□□□□□ -1.9
CACNA1E-202ENST00000358338 CMYA5Q8N3K9 4069 aa3.12□□□□□ -1.91
CACNA1E-202ENST00000358338 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
CACNA1E-202ENST00000358338 SVEP1Q4LDE5 3571 aa3.11□□□□□ -1.91
CACNA1E-202ENST00000358338 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
CACNA1E-202ENST00000358338 DNAH7Q8WXX0 4024 aa3.09□□□□□ -1.91
CACNA1E-202ENST00000358338 HUWE1Q7Z6Z7 4374 aaKnown RBP3.07□□□□□ -1.92
CACNA1E-202ENST00000358338 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
CACNA1E-202ENST00000358338 CSMD3Q7Z407 3707 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms