RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 CFAP47Q6ZTR5 3102 aa4.13□□□□□ -1.75
NF1-202ENST00000358273 CDH23Q9H251 3354 aa4.13□□□□□ -1.75
NF1-202ENST00000358273 UNC80Q8N2C7 3258 aa4.1□□□□□ -1.75
NF1-202ENST00000358273 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
NF1-202ENST00000358273 BRCA2P51587 3418 aa4.1□□□□□ -1.75
NF1-202ENST00000358273 PANO1I0J062 215 aa4.1□□□□□ -1.75
NF1-202ENST00000358273 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
NF1-202ENST00000358273 SPRR1BP22528 89 aa4.09□□□□□ -1.75
NF1-202ENST00000358273 OTOGQ6ZRI0 2925 aa4.09□□□□□ -1.75
NF1-202ENST00000358273 ASPMQ8IZT6 3477 aa4.08□□□□□ -1.76
NF1-202ENST00000358273 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
NF1-202ENST00000358273 J3QKU1 62 aa4.08□□□□□ -1.76
NF1-202ENST00000358273 S4R3F8 94 aa4.08□□□□□ -1.76
NF1-202ENST00000358273 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
NF1-202ENST00000358273 NBPF19A0A087WUL8 3843 aa4.07□□□□□ -1.76
NF1-202ENST00000358273 PKD1L1Q8TDX9 2849 aa4.06□□□□□ -1.76
NF1-202ENST00000358273 COL7A1Q02388 2944 aa4.05□□□□□ -1.76
NF1-202ENST00000358273 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
NF1-202ENST00000358273 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
NF1-202ENST00000358273 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
NF1-202ENST00000358273 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
NF1-202ENST00000358273 LAMA5O15230 3695 aa4.03□□□□□ -1.76
NF1-202ENST00000358273 COX6B2Q6YFQ2 88 aa4.03□□□□□ -1.77
NF1-202ENST00000358273 TENM4Q6N022 2769 aa4.02□□□□□ -1.77
NF1-202ENST00000358273 H0YAA0 97 aa4.02□□□□□ -1.77
NF1-202ENST00000358273 MYO15AQ9UKN7 3530 aa4.02□□□□□ -1.77
NF1-202ENST00000358273 LOC400499M0QZD8 3231 aa4.02□□□□□ -1.77
NF1-202ENST00000358273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
NF1-202ENST00000358273 USP34Q70CQ2 3546 aa4.01□□□□□ -1.77
NF1-202ENST00000358273 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
NF1-202ENST00000358273 TENM2Q9NT68 2774 aa4□□□□□ -1.77
NF1-202ENST00000358273 ZFHX4Q86UP3 3567 aa4□□□□□ -1.77
NF1-202ENST00000358273 P0C880 135 aa4□□□□□ -1.77
NF1-202ENST00000358273 CSMD1Q96PZ7 3565 aa3.99□□□□□ -1.77
NF1-202ENST00000358273 KRTAP10-3P60369 221 aa3.98□□□□□ -1.77
NF1-202ENST00000358273 FBN1P35555 2871 aaKnown RBP3.98□□□□□ -1.77
NF1-202ENST00000358273 A0A087WTM6 91 aa3.98□□□□□ -1.77
NF1-202ENST00000358273 WWC2-AS2Q96NR7 200 aa3.98□□□□□ -1.77
NF1-202ENST00000358273 M0QZ58 72 aa3.97□□□□□ -1.77
NF1-202ENST00000358273 SPEGQ15772 3267 aa3.97□□□□□ -1.77
NF1-202ENST00000358273 MEGF8Q7Z7M0 2845 aa3.97□□□□□ -1.77
NF1-202ENST00000358273 SZT2Q5T011 3432 aa3.97□□□□□ -1.77
NF1-202ENST00000358273 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
NF1-202ENST00000358273 Q6ZSA8 131 aa3.96□□□□□ -1.78
NF1-202ENST00000358273 J3QL48 77 aa3.95□□□□□ -1.78
NF1-202ENST00000358273 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
NF1-202ENST00000358273 R4GN34 69 aa3.92□□□□□ -1.78
NF1-202ENST00000358273 KRTAP24-1Q3LI83 254 aa3.89□□□□□ -1.79
NF1-202ENST00000358273 VPS13CQ709C8 3753 aa3.88□□□□□ -1.79
NF1-202ENST00000358273 DCHS1Q96JQ0 3298 aa3.88□□□□□ -1.79
NF1-202ENST00000358273 EYSQ5T1H1 3165 aa3.87□□□□□ -1.79
NF1-202ENST00000358273 FBN3Q75N90 2809 aa3.84□□□□□ -1.79
NF1-202ENST00000358273 KRTAP13-1Q8IUC0 172 aa3.84□□□□□ -1.79
NF1-202ENST00000358273 KRTAP13-3Q3SY46 172 aa3.82□□□□□ -1.8
NF1-202ENST00000358273 RELNP78509 3460 aa3.82□□□□□ -1.8
NF1-202ENST00000358273 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
NF1-202ENST00000358273 KRTAP1-1Q07627 177 aa3.82□□□□□ -1.8
NF1-202ENST00000358273 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
NF1-202ENST00000358273 KRTAP1-3Q8IUG1 177 aa3.81□□□□□ -1.8
NF1-202ENST00000358273 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
NF1-202ENST00000358273 CUBNO60494 3623 aa3.77□□□□□ -1.81
NF1-202ENST00000358273 M0R2T5 61 aa3.73□□□□□ -1.81
NF1-202ENST00000358273 KRTAP13-2Q52LG2 175 aa3.73□□□□□ -1.81
NF1-202ENST00000358273 AKAP9Q99996 3911 aa3.7□□□□□ -1.82
NF1-202ENST00000358273 SVEP1Q4LDE5 3571 aa3.67□□□□□ -1.82
NF1-202ENST00000358273 CSMD3Q7Z407 3707 aa3.65□□□□□ -1.82
NF1-202ENST00000358273 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
NF1-202ENST00000358273 KRTAP10-2P60368 255 aa3.64□□□□□ -1.83
NF1-202ENST00000358273 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
NF1-202ENST00000358273 ALMS1Q8TCU4 4167 aa3.63□□□□□ -1.83
NF1-202ENST00000358273 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
NF1-202ENST00000358273 Q6ZRN7 208 aaPredicted RBP3.62□□□□□ -1.83
NF1-202ENST00000358273 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.84
NF1-202ENST00000358273 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
NF1-202ENST00000358273 TNP1P09430 55 aa3.56□□□□□ -1.84
NF1-202ENST00000358273 MUC3AQ02505 3323 aa3.54□□□□□ -1.84
NF1-202ENST00000358273 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
NF1-202ENST00000358273 TRRAPQ9Y4A5 3859 aa3.5□□□□□ -1.85
NF1-202ENST00000358273 CSMD2Q7Z408 3487 aa3.49□□□□□ -1.85
NF1-202ENST00000358273 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
NF1-202ENST00000358273 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
NF1-202ENST00000358273 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
NF1-202ENST00000358273 XP32Q5T750 250 aa3.46□□□□□ -1.86
NF1-202ENST00000358273 Q5VSD8 79 aa3.46□□□□□ -1.86
NF1-202ENST00000358273 KRTAP10-6P60371 365 aaPredicted RBP3.45□□□□□ -1.86
NF1-202ENST00000358273 LYSTQ99698 3801 aa3.44□□□□□ -1.86
NF1-202ENST00000358273 BSNQ9UPA5 3926 aa3.42□□□□□ -1.86
NF1-202ENST00000358273 INE1O15225 51 aa3.39□□□□□ -1.87
NF1-202ENST00000358273 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
NF1-202ENST00000358273 KRTAP3-2Q9BYR7 98 aa3.35□□□□□ -1.87
NF1-202ENST00000358273 KRTAP3-3Q9BYR6 98 aa3.28□□□□□ -1.88
NF1-202ENST00000358273 HECTD4Q9Y4D8 3996 aa3.27□□□□□ -1.89
NF1-202ENST00000358273 DNAH3Q8TD57 4116 aa3.18□□□□□ -1.9
NF1-202ENST00000358273 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
NF1-202ENST00000358273 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
NF1-202ENST00000358273 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
NF1-202ENST00000358273 ZNF469Q96JG9 3925 aaPredicted RBP3.09□□□□□ -1.91
NF1-202ENST00000358273 ANK2Q01484 3957 aa3.07□□□□□ -1.92
NF1-202ENST00000358273 DNAH7Q8WXX0 4024 aa3.06□□□□□ -1.92
NF1-202ENST00000358273 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms