RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
NIPAL3-203ENST00000358028 FAT1Q14517 4588 aa8.57□□□□□ -1.04
NIPAL3-203ENST00000358028 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
NIPAL3-203ENST00000358028 Q6ZSA8 131 aa8.57□□□□□ -1.04
NIPAL3-203ENST00000358028 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
NIPAL3-203ENST00000358028 H0Y9P7 68 aa8.56□□□□□ -1.04
NIPAL3-203ENST00000358028 Q8N1X5 172 aa8.56□□□□□ -1.04
NIPAL3-203ENST00000358028 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-203ENST00000358028 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
NIPAL3-203ENST00000358028 LINC00208Q96KT6 92 aa8.54□□□□□ -1.04
NIPAL3-203ENST00000358028 Q96NJ1 140 aa8.54□□□□□ -1.04
NIPAL3-203ENST00000358028 MOBPQ13875 183 aa8.53□□□□□ -1.04
NIPAL3-203ENST00000358028 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
NIPAL3-203ENST00000358028 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
NIPAL3-203ENST00000358028 C1orf64Q8NEQ6 169 aa8.53□□□□□ -1.04
NIPAL3-203ENST00000358028 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
NIPAL3-203ENST00000358028 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
NIPAL3-203ENST00000358028 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
NIPAL3-203ENST00000358028 TP53AIP1Q9HCN2 124 aa8.51□□□□□ -1.05
NIPAL3-203ENST00000358028 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
NIPAL3-203ENST00000358028 CIRBP-AS1Q8TBR5 109 aa8.49□□□□□ -1.05
NIPAL3-203ENST00000358028 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
NIPAL3-203ENST00000358028 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
NIPAL3-203ENST00000358028 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
NIPAL3-203ENST00000358028 Q1T7F1 81 aa8.46□□□□□ -1.05
NIPAL3-203ENST00000358028 PRO0628Q9UI54 55 aa8.45□□□□□ -1.06
NIPAL3-203ENST00000358028 Q5VSD8 79 aa8.44□□□□□ -1.06
NIPAL3-203ENST00000358028 CD164Q04900 197 aa8.43□□□□□ -1.06
NIPAL3-203ENST00000358028 HERC1Q15751 4861 aa8.42□□□□□ -1.06
NIPAL3-203ENST00000358028 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
NIPAL3-203ENST00000358028 PRR4Q16378 134 aa8.41□□□□□ -1.06
NIPAL3-203ENST00000358028 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.07
NIPAL3-203ENST00000358028 V9GYY9 64 aa8.4□□□□□ -1.07
NIPAL3-203ENST00000358028 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
NIPAL3-203ENST00000358028 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
NIPAL3-203ENST00000358028 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
NIPAL3-203ENST00000358028 IGLV7-46A0A075B6I9 117 aa8.38□□□□□ -1.07
NIPAL3-203ENST00000358028 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
NIPAL3-203ENST00000358028 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
NIPAL3-203ENST00000358028 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
NIPAL3-203ENST00000358028 NDUFS5O43920 106 aa8.33□□□□□ -1.08
NIPAL3-203ENST00000358028 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
NIPAL3-203ENST00000358028 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
NIPAL3-203ENST00000358028 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
NIPAL3-203ENST00000358028 BRK1Q8WUW1 75 aa8.33□□□□□ -1.08
NIPAL3-203ENST00000358028 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
NIPAL3-203ENST00000358028 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
NIPAL3-203ENST00000358028 A0A087X002 238 aa8.3□□□□□ -1.08
NIPAL3-203ENST00000358028 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
NIPAL3-203ENST00000358028 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
NIPAL3-203ENST00000358028 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.08
NIPAL3-203ENST00000358028 LIMD2Q9BT23 127 aa8.27□□□□□ -1.08
NIPAL3-203ENST00000358028 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
NIPAL3-203ENST00000358028 COA5Q86WW8 74 aa8.27□□□□□ -1.09
NIPAL3-203ENST00000358028 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
NIPAL3-203ENST00000358028 LRP1Q07954 4544 aaKnown RBP8.24□□□□□ -1.09
NIPAL3-203ENST00000358028 PSPHP1O15172 72 aa8.24□□□□□ -1.09
NIPAL3-203ENST00000358028 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
NIPAL3-203ENST00000358028 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
NIPAL3-203ENST00000358028 KRTAP13-3Q3SY46 172 aa8.22□□□□□ -1.09
NIPAL3-203ENST00000358028 A8MUN3 132 aa8.2□□□□□ -1.1
NIPAL3-203ENST00000358028 Q5VV11 94 aa8.18□□□□□ -1.1
NIPAL3-203ENST00000358028 LINC00313P59037 77 aa8.17□□□□□ -1.1
NIPAL3-203ENST00000358028 Q5W150 140 aa8.17□□□□□ -1.1
NIPAL3-203ENST00000358028 HRES1P13985 223 aa8.14□□□□□ -1.11
NIPAL3-203ENST00000358028 PRR15LQ9BU68 103 aa8.14□□□□□ -1.11
NIPAL3-203ENST00000358028 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
NIPAL3-203ENST00000358028 Q75L30 129 aa8.12□□□□□ -1.11
NIPAL3-203ENST00000358028 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
NIPAL3-203ENST00000358028 J3QL48 77 aa8.12□□□□□ -1.11
NIPAL3-203ENST00000358028 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
NIPAL3-203ENST00000358028 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
NIPAL3-203ENST00000358028 HMCN2Q8NDA2 5059 aa8.09□□□□□ -1.11
NIPAL3-203ENST00000358028 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
NIPAL3-203ENST00000358028 SPINK1P00995 79 aa8.07□□□□□ -1.12
NIPAL3-203ENST00000358028 ACYP2P14621 99 aa8.07□□□□□ -1.12
NIPAL3-203ENST00000358028 TNXBP22105 4242 aa8.07□□□□□ -1.12
NIPAL3-203ENST00000358028 IGKV2-30P06310 120 aa8.06□□□□□ -1.12
NIPAL3-203ENST00000358028 SPAG11AQ6PDA7 123 aa8.05□□□□□ -1.12
NIPAL3-203ENST00000358028 PRR26Q8N8Z3 221 aa8.05□□□□□ -1.12
NIPAL3-203ENST00000358028 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
NIPAL3-203ENST00000358028 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
NIPAL3-203ENST00000358028 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
NIPAL3-203ENST00000358028 RPS29P62273 56 aaKnown RBP8.02□□□□□ -1.13
NIPAL3-203ENST00000358028 RETNLBQ9BQ08 111 aa8.01□□□□□ -1.13
NIPAL3-203ENST00000358028 A6NED7 52 aa7.99□□□□□ -1.13
NIPAL3-203ENST00000358028 CDC42SE1Q9NRR8 79 aa7.96□□□□□ -1.14
NIPAL3-203ENST00000358028 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
NIPAL3-203ENST00000358028 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
NIPAL3-203ENST00000358028 LCA10Q71F78 164 aa7.94□□□□□ -1.14
NIPAL3-203ENST00000358028 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
NIPAL3-203ENST00000358028 A8MU10 97 aa7.91□□□□□ -1.14
NIPAL3-203ENST00000358028 PMAIP1Q13794 54 aa7.89□□□□□ -1.15
NIPAL3-203ENST00000358028 IGKV2D-30A0A075B6S6 120 aa7.89□□□□□ -1.15
NIPAL3-203ENST00000358028 SPINK7P58062 85 aa7.86□□□□□ -1.15
NIPAL3-203ENST00000358028 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
NIPAL3-203ENST00000358028 SPTSSBQ8NFR3 76 aa7.84□□□□□ -1.15
NIPAL3-203ENST00000358028 LRP2P98164 4655 aa7.82□□□□□ -1.16
NIPAL3-203ENST00000358028 A0A1B0GU69 56 aa7.81□□□□□ -1.16
NIPAL3-203ENST00000358028 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms