RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 IGLV5-52A0A0A0MRZ9 124 aa10.62□□□□□ -0.71
GYPC-202ENST00000356887 RTL8CO15255 209 aa10.62□□□□□ -0.71
GYPC-202ENST00000356887 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
GYPC-202ENST00000356887 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
GYPC-202ENST00000356887 PLAC8Q9NZF1 115 aa10.59□□□□□ -0.71
GYPC-202ENST00000356887 C8orf17Q9NRJ1 99 aa10.59□□□□□ -0.71
GYPC-202ENST00000356887 Q6ZR54 194 aa10.57□□□□□ -0.72
GYPC-202ENST00000356887 ZNF861PO60384 105 aa10.57□□□□□ -0.72
GYPC-202ENST00000356887 TP53AIP1Q9HCN2 124 aa10.57□□□□□ -0.72
GYPC-202ENST00000356887 PRR15LQ9BU68 103 aa10.56□□□□□ -0.72
GYPC-202ENST00000356887 ANAPC11Q9NYG5 84 aa10.56□□□□□ -0.72
GYPC-202ENST00000356887 A0A1B0GVX0 72 aa10.55□□□□□ -0.72
GYPC-202ENST00000356887 A6NED7 52 aa10.55□□□□□ -0.72
GYPC-202ENST00000356887 IGHV6-1A0A0B4J1U7 121 aa10.52□□□□□ -0.73
GYPC-202ENST00000356887 IGLV7-46A0A075B6I9 117 aa10.51□□□□□ -0.73
GYPC-202ENST00000356887 DNAH17Q9UFH2 4485 aa10.49□□□□□ -0.73
GYPC-202ENST00000356887 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
GYPC-202ENST00000356887 CDK2AP2O75956 126 aa10.49□□□□□ -0.73
GYPC-202ENST00000356887 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
GYPC-202ENST00000356887 A0A087X002 238 aa10.46□□□□□ -0.73
GYPC-202ENST00000356887 LY6G6CO95867 125 aa10.46□□□□□ -0.73
GYPC-202ENST00000356887 MRPL34Q9BQ48 92 aaKnown RBP10.46□□□□□ -0.73
GYPC-202ENST00000356887 PCOTHQ58A44 107 aa10.45□□□□□ -0.74
GYPC-202ENST00000356887 NOTCH2NLQ7Z3S9 236 aa10.45□□□□□ -0.74
GYPC-202ENST00000356887 DNAH2Q9P225 4427 aa10.44□□□□□ -0.74
GYPC-202ENST00000356887 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
GYPC-202ENST00000356887 ALMS1Q8TCU4 4167 aa10.44□□□□□ -0.74
GYPC-202ENST00000356887 C1orf134Q5TEV5 83 aa10.43□□□□□ -0.74
GYPC-202ENST00000356887 COA5Q86WW8 74 aa10.43□□□□□ -0.74
GYPC-202ENST00000356887 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
GYPC-202ENST00000356887 PRR26Q8N8Z3 221 aa10.42□□□□□ -0.74
GYPC-202ENST00000356887 DNAH6Q9C0G6 4158 aa10.41□□□□□ -0.74
GYPC-202ENST00000356887 FRAS1Q86XX4 4008 aa10.41□□□□□ -0.74
GYPC-202ENST00000356887 LINC01558Q9Y6Z2 57 aa10.4□□□□□ -0.75
GYPC-202ENST00000356887 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
GYPC-202ENST00000356887 CIRBP-AS1Q8TBR5 109 aa10.35□□□□□ -0.75
GYPC-202ENST00000356887 SSBP3-AS1Q7Z2R9 100 aa10.34□□□□□ -0.75
GYPC-202ENST00000356887 PLA2G1BP04054 148 aaKnown RBP10.33□□□□□ -0.76
GYPC-202ENST00000356887 LINC00313P59037 77 aa10.32□□□□□ -0.76
GYPC-202ENST00000356887 HYDINQ4G0P3 5121 aa10.31□□□□□ -0.76
GYPC-202ENST00000356887 KRTAP13-3Q3SY46 172 aa10.31□□□□□ -0.76
GYPC-202ENST00000356887 Q5W150 140 aa10.3□□□□□ -0.76
GYPC-202ENST00000356887 HRES1P13985 223 aa10.28□□□□□ -0.76
GYPC-202ENST00000356887 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
GYPC-202ENST00000356887 SACSQ9NZJ4 4579 aa10.26□□□□□ -0.77
GYPC-202ENST00000356887 SPAG11AQ6PDA7 123 aa10.21□□□□□ -0.78
GYPC-202ENST00000356887 KRTAP13-2Q52LG2 175 aa10.2□□□□□ -0.78
GYPC-202ENST00000356887 DNAH11Q96DT5 4516 aa10.19□□□□□ -0.78
GYPC-202ENST00000356887 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
GYPC-202ENST00000356887 Q6ZSA8 131 aa10.17□□□□□ -0.78
GYPC-202ENST00000356887 SPINK7P58062 85 aa10.16□□□□□ -0.78
GYPC-202ENST00000356887 KRTAP10-1P60331 282 aa10.15□□□□□ -0.78
GYPC-202ENST00000356887 FAT2Q9NYQ8 4349 aa10.14□□□□□ -0.79
GYPC-202ENST00000356887 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
GYPC-202ENST00000356887 KMT2CQ8NEZ4 4911 aaKnown RBP10.12□□□□□ -0.79
GYPC-202ENST00000356887 FAM229AH3BQW9 127 aa10.11□□□□□ -0.79
GYPC-202ENST00000356887 ACYP2P14621 99 aa10.1□□□□□ -0.79
GYPC-202ENST00000356887 RYR2Q92736 4967 aa10.08□□□□□ -0.8
GYPC-202ENST00000356887 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
GYPC-202ENST00000356887 KRTAP1-4P0C5Y4 121 aa10.08□□□□□ -0.8
GYPC-202ENST00000356887 PKD1P98161 4303 aa10.07□□□□□ -0.8
GYPC-202ENST00000356887 DMAC1Q96GE9 116 aa10.06□□□□□ -0.8
GYPC-202ENST00000356887 IGKV2-30P06310 120 aa10.06□□□□□ -0.8
GYPC-202ENST00000356887 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
GYPC-202ENST00000356887 LRP1BQ9NZR2 4599 aa10.03□□□□□ -0.8
GYPC-202ENST00000356887 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
GYPC-202ENST00000356887 RYR3Q15413 4870 aa9.96□□□□□ -0.81
GYPC-202ENST00000356887 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
GYPC-202ENST00000356887 TYMSOSQ8TAI1 123 aa9.93□□□□□ -0.82
GYPC-202ENST00000356887 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
GYPC-202ENST00000356887 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
GYPC-202ENST00000356887 SPINK1P00995 79 aa9.91□□□□□ -0.82
GYPC-202ENST00000356887 A0A1B0GVY2 172 aa9.91□□□□□ -0.82
GYPC-202ENST00000356887 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
GYPC-202ENST00000356887 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
GYPC-202ENST00000356887 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
GYPC-202ENST00000356887 A0A1B0GU69 56 aa9.81□□□□□ -0.84
GYPC-202ENST00000356887 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
GYPC-202ENST00000356887 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
GYPC-202ENST00000356887 UQCR11O14957 56 aa9.73□□□□□ -0.85
GYPC-202ENST00000356887 ROMO1P60602 79 aa9.72□□□□□ -0.85
GYPC-202ENST00000356887 MIR22HGQ0VDD5 57 aa9.72□□□□□ -0.85
GYPC-202ENST00000356887 APOBP04114 4563 aaKnown RBP9.71□□□□□ -0.85
GYPC-202ENST00000356887 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
GYPC-202ENST00000356887 Q8N1X5 172 aa9.66□□□□□ -0.86
GYPC-202ENST00000356887 A8MUU9 505 aa9.62□□□□□ -0.87
GYPC-202ENST00000356887 EPPK1P58107 5090 aaKnown RBP9.61□□□□□ -0.87
GYPC-202ENST00000356887 C20orf166-AS1Q96NR2 134 aa9.61□□□□□ -0.87
GYPC-202ENST00000356887 KRTAP10-4P60372 401 aaPredicted RBP9.6□□□□□ -0.87
GYPC-202ENST00000356887 J3QL48 77 aa9.59□□□□□ -0.87
GYPC-202ENST00000356887 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
GYPC-202ENST00000356887 PKHD1L1Q86WI1 4243 aa9.58□□□□□ -0.88
GYPC-202ENST00000356887 FAT1Q14517 4588 aa9.57□□□□□ -0.88
GYPC-202ENST00000356887 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
GYPC-202ENST00000356887 HSPG2P98160 4391 aa9.51□□□□□ -0.89
GYPC-202ENST00000356887 KRTAP3-1Q9BYR8 98 aa9.49□□□□□ -0.89
GYPC-202ENST00000356887 RYR1P21817 5038 aa9.47□□□□□ -0.89
GYPC-202ENST00000356887 KIAA1109Q2LD37 5005 aa9.41□□□□□ -0.9
GYPC-202ENST00000356887 Q5VSD8 79 aa9.4□□□□□ -0.91
GYPC-202ENST00000356887 KRTAP17-1Q9BYP8 105 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms