RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ORMDL1Q9P0S3 153 aa5.44□□□□□ -1.54
CAPN3-204ENST00000356316 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
CAPN3-204ENST00000356316 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
CAPN3-204ENST00000356316 TRIAP1O43715 76 aa5.43□□□□□ -1.54
CAPN3-204ENST00000356316 COX6CP09669 75 aa5.43□□□□□ -1.54
CAPN3-204ENST00000356316 A0A1B0GV72 72 aa5.42□□□□□ -1.54
CAPN3-204ENST00000356316 FXYD2P54710 66 aa5.41□□□□□ -1.54
CAPN3-204ENST00000356316 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
CAPN3-204ENST00000356316 TRACP01848 142 aa5.4□□□□□ -1.54
CAPN3-204ENST00000356316 CCKP06307 115 aa5.4□□□□□ -1.54
CAPN3-204ENST00000356316 DEFB116Q30KQ4 102 aa5.4□□□□□ -1.54
CAPN3-204ENST00000356316 IGHV6-1A0A0B4J1U7 121 aa5.39□□□□□ -1.55
CAPN3-204ENST00000356316 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
CAPN3-204ENST00000356316 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
CAPN3-204ENST00000356316 HSD52Q0P140 79 aa5.37□□□□□ -1.55
CAPN3-204ENST00000356316 VPS25Q9BRG1 176 aa5.37□□□□□ -1.55
CAPN3-204ENST00000356316 LINC00472Q9H8W2 130 aa5.37□□□□□ -1.55
CAPN3-204ENST00000356316 UBE2V1Q13404 147 aa5.36□□□□□ -1.55
CAPN3-204ENST00000356316 MTURNQ8N3F0 131 aa5.36□□□□□ -1.55
CAPN3-204ENST00000356316 K7ERJ3 54 aa5.35□□□□□ -1.55
CAPN3-204ENST00000356316 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
CAPN3-204ENST00000356316 NOTCH2NLQ7Z3S9 236 aa5.35□□□□□ -1.55
CAPN3-204ENST00000356316 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
CAPN3-204ENST00000356316 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
CAPN3-204ENST00000356316 RBM3P98179 157 aaKnown RBP5.34□□□□□ -1.55
CAPN3-204ENST00000356316 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
CAPN3-204ENST00000356316 J3KT08 172 aa5.31□□□□□ -1.56
CAPN3-204ENST00000356316 HRES1P13985 223 aa5.31□□□□□ -1.56
CAPN3-204ENST00000356316 C9JAW5 83 aa5.3□□□□□ -1.56
CAPN3-204ENST00000356316 NDUFB1O75438 58 aa5.3□□□□□ -1.56
CAPN3-204ENST00000356316 PYY3Q5JQD4 70 aa5.3□□□□□ -1.56
CAPN3-204ENST00000356316 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
CAPN3-204ENST00000356316 UQCR10Q9UDW1 63 aa5.3□□□□□ -1.56
CAPN3-204ENST00000356316 MT2AP02795 61 aa5.29□□□□□ -1.56
CAPN3-204ENST00000356316 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
CAPN3-204ENST00000356316 BAALC-AS2P0C853 105 aa5.28□□□□□ -1.56
CAPN3-204ENST00000356316 LYRM7Q5U5X0 104 aa5.28□□□□□ -1.56
CAPN3-204ENST00000356316 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
CAPN3-204ENST00000356316 USH2AO75445 5202 aa5.28□□□□□ -1.56
CAPN3-204ENST00000356316 SPINK7P58062 85 aa5.27□□□□□ -1.57
CAPN3-204ENST00000356316 Q6ZQT0 140 aa5.25□□□□□ -1.57
CAPN3-204ENST00000356316 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
CAPN3-204ENST00000356316 MT1FP04733 61 aa5.24□□□□□ -1.57
CAPN3-204ENST00000356316 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CAPN3-204ENST00000356316 JMJD7-PLA2G4BH0Y9G9 81 aa5.23□□□□□ -1.57
CAPN3-204ENST00000356316 A0A1B0GW54 56 aa5.22□□□□□ -1.57
CAPN3-204ENST00000356316 Q8N9P0 234 aaPredicted RBP5.22□□□□□ -1.57
CAPN3-204ENST00000356316 A8MWP4 228 aa5.21□□□□□ -1.58
CAPN3-204ENST00000356316 ATXN8Q156A1 80 aa5.21□□□□□ -1.58
CAPN3-204ENST00000356316 PDE6GP18545 87 aa5.2□□□□□ -1.58
CAPN3-204ENST00000356316 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
CAPN3-204ENST00000356316 LINC00846Q9NV44 126 aa5.2□□□□□ -1.58
CAPN3-204ENST00000356316 WFDC13Q8IUB5 93 aa5.19□□□□□ -1.58
CAPN3-204ENST00000356316 LOC110117498A0A087WWA1 95 aa5.18□□□□□ -1.58
CAPN3-204ENST00000356316 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-204ENST00000356316 M0R143 59 aa5.17□□□□□ -1.58
CAPN3-204ENST00000356316 NREPQ16612 68 aa5.17□□□□□ -1.58
CAPN3-204ENST00000356316 Q6ZVQ6 151 aa5.17□□□□□ -1.58
CAPN3-204ENST00000356316 IGKV3D-7A0A0C4DH55 119 aa5.16□□□□□ -1.58
CAPN3-204ENST00000356316 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
CAPN3-204ENST00000356316 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
CAPN3-204ENST00000356316 C14orf132Q9NPU4 83 aa5.14□□□□□ -1.59
CAPN3-204ENST00000356316 NDUFS5O43920 106 aa5.12□□□□□ -1.59
CAPN3-204ENST00000356316 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
CAPN3-204ENST00000356316 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
CAPN3-204ENST00000356316 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
CAPN3-204ENST00000356316 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
CAPN3-204ENST00000356316 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
CAPN3-204ENST00000356316 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
CAPN3-204ENST00000356316 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
CAPN3-204ENST00000356316 K7EQZ3 153 aa5.05□□□□□ -1.6
CAPN3-204ENST00000356316 BPY2O14599 106 aa5.05□□□□□ -1.6
CAPN3-204ENST00000356316 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
CAPN3-204ENST00000356316 BATFQ16520 125 aa5.05□□□□□ -1.6
CAPN3-204ENST00000356316 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
CAPN3-204ENST00000356316 TSTD3H0UI37 97 aa5.03□□□□□ -1.6
CAPN3-204ENST00000356316 C7orf65Q6ZTY9 151 aa5.03□□□□□ -1.6
CAPN3-204ENST00000356316 H3BT86 120 aa5.02□□□□□ -1.61
CAPN3-204ENST00000356316 SMIM6P0DI80 62 aa5.01□□□□□ -1.61
CAPN3-204ENST00000356316 CASC2Q6XLA1 102 aa5□□□□□ -1.61
CAPN3-204ENST00000356316 Q5W150 140 aa4.99□□□□□ -1.61
CAPN3-204ENST00000356316 HCG22E2RYF7 251 aa4.98□□□□□ -1.61
CAPN3-204ENST00000356316 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
CAPN3-204ENST00000356316 A0A1W2PPM0 123 aa4.97□□□□□ -1.61
CAPN3-204ENST00000356316 CXCL6P80162 114 aa4.97□□□□□ -1.61
CAPN3-204ENST00000356316 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
CAPN3-204ENST00000356316 Q8N9L7 120 aa4.96□□□□□ -1.62
CAPN3-204ENST00000356316 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
CAPN3-204ENST00000356316 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
CAPN3-204ENST00000356316 TAX1BP3O14907 124 aa4.93□□□□□ -1.62
CAPN3-204ENST00000356316 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
CAPN3-204ENST00000356316 UBL5Q9BZL1 73 aa4.91□□□□□ -1.62
CAPN3-204ENST00000356316 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
CAPN3-204ENST00000356316 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.63
CAPN3-204ENST00000356316 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
CAPN3-204ENST00000356316 S4R3F8 94 aa4.89□□□□□ -1.63
CAPN3-204ENST00000356316 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
CAPN3-204ENST00000356316 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CAPN3-204ENST00000356316 A6NN06 94 aa4.84□□□□□ -1.63
CAPN3-204ENST00000356316 Q5VV11 94 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms